RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
USP35-207ENST00000530546 STRCQ7RTU9 1775 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 CRYBG1Q9Y4K1 1723 aa13.94□□□□□ -0.18
USP35-207ENST00000530546 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
USP35-207ENST00000530546 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
USP35-207ENST00000530546 A0A087WZG4 1122 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF26B4DH59 902 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 MCM5P33992 734 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF14Q5TI25 921 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF10Q6P3W6 841 aaKnown RBP13.93□□□□□ -0.18
USP35-207ENST00000530546 NBPF15Q8N660 670 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 CARD10Q9BWT7 1032 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
USP35-207ENST00000530546 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
USP35-207ENST00000530546 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 TTC41PQ6P2S7 1318 aa13.93□□□□□ -0.18
USP35-207ENST00000530546 DMTNQ08495 405 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 PKP1Q13835 747 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 CLEC17AQ6ZS10 378 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 CHMP3Q9Y3E7 222 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 SGSM2O43147 1006 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 ZBTB3Q9H5J0 574 aa13.92□□□□□ -0.18
USP35-207ENST00000530546 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
USP35-207ENST00000530546 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
USP35-207ENST00000530546 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 MRC1P22897 1456 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 PLBD2Q8NHP8 589 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 TMX3Q96JJ7 454 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 BTG4Q9NY30 223 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 CCDC9Q9Y3X0 531 aaKnown RBP13.91□□□□□ -0.18
USP35-207ENST00000530546 ABCC6O95255 1503 aa13.91□□□□□ -0.18
USP35-207ENST00000530546 ZNF445P59923 1031 aa13.9□□□□□ -0.18
USP35-207ENST00000530546 CCDC94Q9BW85 323 aaPredicted RBP13.9□□□□□ -0.18
USP35-207ENST00000530546 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
USP35-207ENST00000530546 PDLIM2Q96JY6 352 aa13.9□□□□□ -0.18
USP35-207ENST00000530546 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
USP35-207ENST00000530546 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 HSPA4P34932 840 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 ANAPC15P60006 121 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 LARP6Q9BRS8 491 aaKnown RBP13.89□□□□□ -0.19
USP35-207ENST00000530546 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
USP35-207ENST00000530546 TMOD3Q9NYL9 352 aa13.89□□□□□ -0.19
USP35-207ENST00000530546 NUCB2P80303 420 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 RAD50Q92878 1312 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
USP35-207ENST00000530546 TFCP2Q12800 502 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 ZKSCAN5Q9Y2L8 839 aa13.88□□□□□ -0.19
USP35-207ENST00000530546 PTH1RQ03431 593 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 RUFY2Q8WXA3 655 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 EDC3Q96F86 508 aaKnown RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 CPA1P15085 419 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 CHAMP1Q96JM3 812 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
USP35-207ENST00000530546 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 SNX14Q9Y5W7 946 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 NDUFB9Q9Y6M9 179 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
USP35-207ENST00000530546 RFX5P48382 616 aaPredicted RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 PLEKHG2Q9H7P9 1386 aa13.86□□□□□ -0.19
USP35-207ENST00000530546 MCM2P49736 904 aa13.86□□□□□ -0.19
USP35-207ENST00000530546 CWC25Q9NXE8 425 aaPredicted RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 NMIQ13287 307 aaPredicted RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
USP35-207ENST00000530546 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
USP35-207ENST00000530546 A0A0G2JS52 829 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 KCNJ4P48050 445 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 KIF20AO95235 890 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 CASP7P55210 303 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 PIGBQ92521 554 aa13.85□□□□□ -0.19
USP35-207ENST00000530546 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
USP35-207ENST00000530546 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
USP35-207ENST00000530546 TNNI3KQ59H18 835 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 DBNLQ9UJU6 430 aaKnown RBP13.84□□□□□ -0.19
USP35-207ENST00000530546 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 FPGT-TNNI3KV9GXZ4 949 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 DBNDD2Q9BQY9 259 aa13.84□□□□□ -0.19
USP35-207ENST00000530546 H7C1W4 665 aa13.83□□□□□ -0.19
USP35-207ENST00000530546 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.19
USP35-207ENST00000530546 CCDC85AQ96PX6 553 aaPredicted RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms