RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 GPR162Q16538 588 aa22.08■■□□□ 1.13
LMX1B-203ENST00000526117 PI4KAP1Q8N8J0 262 aa22.08■■□□□ 1.13
LMX1B-203ENST00000526117 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
LMX1B-203ENST00000526117 TNRC6CQ9HCJ0 1690 aaKnown RBP22.07■■□□□ 1.12
LMX1B-203ENST00000526117 SRGNP10124 158 aa22.07■■□□□ 1.12
LMX1B-203ENST00000526117 YBX3P16989 372 aaKnown RBP eCLIP22.07■■□□□ 1.12
LMX1B-203ENST00000526117 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
LMX1B-203ENST00000526117 CHRNA5P30532 468 aa22.07■■□□□ 1.12
LMX1B-203ENST00000526117 CRY2Q49AN0 593 aa22.07■■□□□ 1.12
LMX1B-203ENST00000526117 C2CD5Q86YS7 1000 aa22.07■■□□□ 1.12
LMX1B-203ENST00000526117 CCDC191Q8NCU4 936 aa22.07■■□□□ 1.12
LMX1B-203ENST00000526117 MAP3K2Q9Y2U5 619 aa22.07■■□□□ 1.12
LMX1B-203ENST00000526117 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
LMX1B-203ENST00000526117 ERFEQ4G0M1 354 aa22.06■■□□□ 1.12
LMX1B-203ENST00000526117 STYK1Q6J9G0 422 aa22.06■■□□□ 1.12
LMX1B-203ENST00000526117 FKBP5Q13451 457 aaPredicted RBP22.05■■□□□ 1.12
LMX1B-203ENST00000526117 NUTM1Q86Y26 1132 aa22.05■■□□□ 1.12
LMX1B-203ENST00000526117 MASTLQ96GX5 879 aa22.05■■□□□ 1.12
LMX1B-203ENST00000526117 UTRNP46939 3433 aa22.05■■□□□ 1.12
LMX1B-203ENST00000526117 SH3TC1Q8TE82 1336 aa22.05■■□□□ 1.12
LMX1B-203ENST00000526117 LAMB2P55268 1798 aa22.04■■□□□ 1.12
LMX1B-203ENST00000526117 FAM177BA6PVY3 158 aa22.04■■□□□ 1.12
LMX1B-203ENST00000526117 NEXNQ0ZGT2 675 aa22.04■■□□□ 1.12
LMX1B-203ENST00000526117 DALRD3Q5D0E6 543 aaKnown RBP22.04■■□□□ 1.12
LMX1B-203ENST00000526117 CCDC24Q8N4L8 307 aa22.04■■□□□ 1.12
LMX1B-203ENST00000526117 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
LMX1B-203ENST00000526117 MYD88Q99836 296 aa22.04■■□□□ 1.12
LMX1B-203ENST00000526117 TRMT112Q9UI30 125 aaKnown RBP22.04■■□□□ 1.12
LMX1B-203ENST00000526117 PTPRCP08575 1304 aa22.04■■□□□ 1.12
LMX1B-203ENST00000526117 ATP5J2-PTCD1G3V325 749 aa22.03■■□□□ 1.12
LMX1B-203ENST00000526117 NPR1P16066 1061 aa22.03■■□□□ 1.12
LMX1B-203ENST00000526117 TTLL6Q8N841 843 aa22.03■■□□□ 1.12
LMX1B-203ENST00000526117 DNAAF4Q8WXU2 420 aa22.03■■□□□ 1.12
LMX1B-203ENST00000526117 SSH1Q8WYL5 1049 aa22.03■■□□□ 1.12
LMX1B-203ENST00000526117 IGKV5-2P06315 115 aa22.02■■□□□ 1.12
LMX1B-203ENST00000526117 ZBTB38Q8NAP3 1195 aaPredicted RBP22.02■■□□□ 1.12
LMX1B-203ENST00000526117 CNKSR1Q969H4 720 aa22.02■■□□□ 1.12
LMX1B-203ENST00000526117 CWC25Q9NXE8 425 aaPredicted RBP22.02■■□□□ 1.12
LMX1B-203ENST00000526117 DDX60Q8IY21 1712 aaKnown RBP22.02■■□□□ 1.12
LMX1B-203ENST00000526117 HSP90B1P14625 803 aaKnown RBP22.01■■□□□ 1.11
LMX1B-203ENST00000526117 HOXA10P31260 410 aaPredicted RBP22.01■■□□□ 1.11
LMX1B-203ENST00000526117 BCS1LQ9Y276 419 aa22.01■■□□□ 1.11
LMX1B-203ENST00000526117 PCCAP05165 728 aaPredicted RBP22■■□□□ 1.11
LMX1B-203ENST00000526117 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
LMX1B-203ENST00000526117 LINS1Q8NG48 757 aa22■■□□□ 1.11
LMX1B-203ENST00000526117 NLRP3Q96P20 1036 aa22■■□□□ 1.11
LMX1B-203ENST00000526117 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
LMX1B-203ENST00000526117 ALDH1B1P30837 517 aa21.98■■□□□ 1.11
LMX1B-203ENST00000526117 RARSP54136 660 aaKnown RBP21.98■■□□□ 1.11
LMX1B-203ENST00000526117 CDHR2Q9BYE9 1310 aa21.98■■□□□ 1.11
LMX1B-203ENST00000526117 CHD4Q14839 1912 aa21.98■■□□□ 1.11
LMX1B-203ENST00000526117 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
LMX1B-203ENST00000526117 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
LMX1B-203ENST00000526117 CRAMP1Q96RY5 1269 aa21.97■■□□□ 1.11
LMX1B-203ENST00000526117 SMC4Q9NTJ3 1288 aa21.97■■□□□ 1.11
LMX1B-203ENST00000526117 YY1P25490 414 aa21.96■■□□□ 1.11
LMX1B-203ENST00000526117 BEND3Q5T5X7 828 aa21.96■■□□□ 1.11
LMX1B-203ENST00000526117 PRPF40BQ6NWY9 871 aaKnown RBP21.96■■□□□ 1.11
LMX1B-203ENST00000526117 SYNE4Q8N205 404 aa21.96■■□□□ 1.11
LMX1B-203ENST00000526117 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.1
LMX1B-203ENST00000526117 GCKRQ14397 625 aa21.95■■□□□ 1.1
LMX1B-203ENST00000526117 SF3B3Q15393 1217 aaKnown RBP21.95■■□□□ 1.1
LMX1B-203ENST00000526117 CWF19L2Q2TBE0 894 aaKnown RBP21.95■■□□□ 1.1
LMX1B-203ENST00000526117 SOGA3Q5TF21 947 aa21.95■■□□□ 1.1
LMX1B-203ENST00000526117 RPGRQ92834 1020 aaKnown RBP21.95■■□□□ 1.1
LMX1B-203ENST00000526117 SLX4Q8IY92 1834 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 F6X3S4 739 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 H7C1W4 665 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 ALDH1L1O75891 902 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 HCLS1P14317 486 aaPredicted RBP21.94■■□□□ 1.1
LMX1B-203ENST00000526117 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
LMX1B-203ENST00000526117 KIF16BQ96L93 1317 aa21.94■■□□□ 1.1
LMX1B-203ENST00000526117 ARHGAP45Q92619 1136 aa21.93■■□□□ 1.1
LMX1B-203ENST00000526117 WWC3Q9ULE0 1092 aa21.93■■□□□ 1.1
LMX1B-203ENST00000526117 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
LMX1B-203ENST00000526117 CACNA1SQ13698 1873 aa21.92■■□□□ 1.1
LMX1B-203ENST00000526117 LTBP3Q9NS15 1303 aa21.91■■□□□ 1.1
LMX1B-203ENST00000526117 PDE8AO60658 829 aa21.91■■□□□ 1.1
LMX1B-203ENST00000526117 CASP7P55210 303 aa21.91■■□□□ 1.1
LMX1B-203ENST00000526117 PLA2G12BQ9BX93 195 aa21.91■■□□□ 1.1
LMX1B-203ENST00000526117 FER1L6Q2WGJ9 1857 aa21.91■■□□□ 1.1
LMX1B-203ENST00000526117 SNED1Q8TER0 1413 aa21.9■■□□□ 1.1
LMX1B-203ENST00000526117 GRIPAP1Q4V328 841 aa21.9■■□□□ 1.1
LMX1B-203ENST00000526117 CC2D2BQ6DHV5 1058 aa21.9■■□□□ 1.1
LMX1B-203ENST00000526117 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
LMX1B-203ENST00000526117 RTL9Q8NET4 1388 aa21.89■■□□□ 1.1
LMX1B-203ENST00000526117 ABCC4O15439 1325 aa21.89■■□□□ 1.1
LMX1B-203ENST00000526117 TMC4Q7Z404 712 aa21.89■■□□□ 1.09
LMX1B-203ENST00000526117 API5Q9BZZ5 524 aaKnown RBP21.89■■□□□ 1.09
LMX1B-203ENST00000526117 MYH3P11055 1940 aa21.88■■□□□ 1.09
LMX1B-203ENST00000526117 UTYO14607 1347 aa21.88■■□□□ 1.09
LMX1B-203ENST00000526117 C21orf2O43822 256 aa21.88■■□□□ 1.09
LMX1B-203ENST00000526117 BBOX1O75936 387 aa21.88■■□□□ 1.09
LMX1B-203ENST00000526117 ARHGAP27Q6ZUM4 889 aa21.88■■□□□ 1.09
LMX1B-203ENST00000526117 DDX46Q7L014 1031 aaKnown RBP21.88■■□□□ 1.09
LMX1B-203ENST00000526117 UBE3BQ7Z3V4 1068 aa21.88■■□□□ 1.09
LMX1B-203ENST00000526117 GRAPQ13588 217 aa21.87■■□□□ 1.09
LMX1B-203ENST00000526117 CCDC93Q567U6 631 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms