RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 ABCC12Q96J65 1359 aa25.38■■□□□ 1.65
EXOSC4-202ENST00000525936 ARFGEF2Q9Y6D5 1785 aa25.38■■□□□ 1.65
EXOSC4-202ENST00000525936 RNF123Q5XPI4 1314 aa25.37■■□□□ 1.65
EXOSC4-202ENST00000525936 DDX58O95786 925 aaKnown RBP25.37■■□□□ 1.65
EXOSC4-202ENST00000525936 GTF2E1P29083 439 aaPredicted RBP25.37■■□□□ 1.65
EXOSC4-202ENST00000525936 COL11A2P13942 1736 aaPredicted RBP25.37■■□□□ 1.65
EXOSC4-202ENST00000525936 CRY2Q49AN0 593 aa25.36■■□□□ 1.65
EXOSC4-202ENST00000525936 METTL22Q9BUU2 404 aaPredicted RBP25.36■■□□□ 1.65
EXOSC4-202ENST00000525936 ARFGEF1Q9Y6D6 1849 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 ADCY9O60503 1353 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 PI4KAP2A4QPH2 592 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 FLIIQ13045 1269 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 STYK1Q6J9G0 422 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 TTLL6Q8N841 843 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 PI4KAP1Q8N8J0 262 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 MASTLQ96GX5 879 aa25.35■■□□□ 1.65
EXOSC4-202ENST00000525936 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
EXOSC4-202ENST00000525936 MAP3K2Q9Y2U5 619 aa25.34■■□□□ 1.65
EXOSC4-202ENST00000525936 TRMT112Q9UI30 125 aaKnown RBP25.33■■□□□ 1.65
EXOSC4-202ENST00000525936 TNRC6CQ9HCJ0 1690 aaKnown RBP25.32■■□□□ 1.64
EXOSC4-202ENST00000525936 NPR1P16066 1061 aa25.32■■□□□ 1.64
EXOSC4-202ENST00000525936 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
EXOSC4-202ENST00000525936 SYNE4Q8N205 404 aa25.32■■□□□ 1.64
EXOSC4-202ENST00000525936 ZNF622Q969S3 477 aaKnown RBP eCLIP25.32■■□□□ 1.64
EXOSC4-202ENST00000525936 ZNF428Q96B54 188 aa25.32■■□□□ 1.64
EXOSC4-202ENST00000525936 CHD4Q14839 1912 aa25.31■■□□□ 1.64
EXOSC4-202ENST00000525936 CCDC191Q8NCU4 936 aa25.31■■□□□ 1.64
EXOSC4-202ENST00000525936 CNKSR1Q969H4 720 aa25.31■■□□□ 1.64
EXOSC4-202ENST00000525936 MYD88Q99836 296 aa25.31■■□□□ 1.64
EXOSC4-202ENST00000525936 SH3TC1Q8TE82 1336 aa25.31■■□□□ 1.64
EXOSC4-202ENST00000525936 HOXA10P31260 410 aaPredicted RBP25.3■■□□□ 1.64
EXOSC4-202ENST00000525936 C3orf67Q6ZVT6 689 aa25.3■■□□□ 1.64
EXOSC4-202ENST00000525936 IGKV5-2P06315 115 aa25.29■■□□□ 1.64
EXOSC4-202ENST00000525936 CT47B1P0C2W7 299 aaPredicted RBP25.28■■□□□ 1.64
EXOSC4-202ENST00000525936 FKBP5Q13451 457 aaPredicted RBP25.28■■□□□ 1.64
EXOSC4-202ENST00000525936 C7orf43Q8WVR3 580 aa25.28■■□□□ 1.64
EXOSC4-202ENST00000525936 FAM89AQ96GI7 184 aa25.28■■□□□ 1.64
EXOSC4-202ENST00000525936 NLRP3Q96P20 1036 aa25.28■■□□□ 1.64
EXOSC4-202ENST00000525936 MRPL50Q8N5N7 158 aaKnown RBP25.27■■□□□ 1.64
EXOSC4-202ENST00000525936 ZBTB38Q8NAP3 1195 aaPredicted RBP25.27■■□□□ 1.64
EXOSC4-202ENST00000525936 SLX4Q8IY92 1834 aa25.26■■□□□ 1.63
EXOSC4-202ENST00000525936 HCLS1P14317 486 aaPredicted RBP25.26■■□□□ 1.63
EXOSC4-202ENST00000525936 PRPF40BQ6NWY9 871 aaKnown RBP25.26■■□□□ 1.63
EXOSC4-202ENST00000525936 ARHGAP27Q6ZUM4 889 aa25.26■■□□□ 1.63
EXOSC4-202ENST00000525936 SSH1Q8WYL5 1049 aa25.26■■□□□ 1.63
EXOSC4-202ENST00000525936 CWC25Q9NXE8 425 aaPredicted RBP25.26■■□□□ 1.63
EXOSC4-202ENST00000525936 YY1P25490 414 aa25.25■■□□□ 1.63
EXOSC4-202ENST00000525936 ALDH1B1P30837 517 aa25.25■■□□□ 1.63
EXOSC4-202ENST00000525936 ALDH1L2Q3SY69 923 aa25.25■■□□□ 1.63
EXOSC4-202ENST00000525936 DNAAF4Q8WXU2 420 aa25.25■■□□□ 1.63
EXOSC4-202ENST00000525936 ZBED9Q6R2W3 1325 aa25.24■■□□□ 1.63
EXOSC4-202ENST00000525936 PCCAP05165 728 aaPredicted RBP25.24■■□□□ 1.63
EXOSC4-202ENST00000525936 NEXNQ0ZGT2 675 aa25.24■■□□□ 1.63
EXOSC4-202ENST00000525936 CRAMP1Q96RY5 1269 aa25.24■■□□□ 1.63
EXOSC4-202ENST00000525936 NEURL1BA8MQ27 555 aa25.23■■□□□ 1.63
EXOSC4-202ENST00000525936 C21orf2O43822 256 aa25.22■■□□□ 1.63
EXOSC4-202ENST00000525936 CWF19L2Q2TBE0 894 aaKnown RBP25.22■■□□□ 1.63
EXOSC4-202ENST00000525936 LINS1Q8NG48 757 aa25.22■■□□□ 1.63
EXOSC4-202ENST00000525936 RPGRQ92834 1020 aaKnown RBP25.22■■□□□ 1.63
EXOSC4-202ENST00000525936 DDX60Q8IY21 1712 aaKnown RBP25.22■■□□□ 1.63
EXOSC4-202ENST00000525936 IRS4O14654 1257 aaPredicted RBP25.21■■□□□ 1.63
EXOSC4-202ENST00000525936 SF3B3Q15393 1217 aaKnown RBP25.21■■□□□ 1.63
EXOSC4-202ENST00000525936 LAMB2P55268 1798 aa25.21■■□□□ 1.63
EXOSC4-202ENST00000525936 F6X3S4 739 aa25.2■■□□□ 1.62
EXOSC4-202ENST00000525936 BRPF1P55201 1214 aaPredicted RBP25.2■■□□□ 1.62
EXOSC4-202ENST00000525936 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.62
EXOSC4-202ENST00000525936 BEND3Q5T5X7 828 aa25.2■■□□□ 1.62
EXOSC4-202ENST00000525936 RBM17Q96I25 401 aaKnown RBP25.2■■□□□ 1.62
EXOSC4-202ENST00000525936 H7C1W4 665 aa25.19■■□□□ 1.62
EXOSC4-202ENST00000525936 GCKRQ14397 625 aa25.19■■□□□ 1.62
EXOSC4-202ENST00000525936 CDHR2Q9BYE9 1310 aa25.18■■□□□ 1.62
EXOSC4-202ENST00000525936 NFKBIEO00221 500 aa25.18■■□□□ 1.62
EXOSC4-202ENST00000525936 SOGA3Q5TF21 947 aa25.18■■□□□ 1.62
EXOSC4-202ENST00000525936 CACNA1SQ13698 1873 aa25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 PTPRCP08575 1304 aa25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 HSP90B1P14625 803 aaKnown RBP25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 PRELPP51888 382 aa25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 JARID2Q92833 1246 aaPredicted RBP25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 ZNF219Q9P2Y4 722 aaPredicted RBP25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 FER1L6Q2WGJ9 1857 aa25.17■■□□□ 1.62
EXOSC4-202ENST00000525936 RARSP54136 660 aaKnown RBP25.16■■□□□ 1.62
EXOSC4-202ENST00000525936 SNED1Q8TER0 1413 aa25.16■■□□□ 1.62
EXOSC4-202ENST00000525936 BCL2L13Q9BXK5 485 aa25.16■■□□□ 1.62
EXOSC4-202ENST00000525936 ABCC4O15439 1325 aa25.15■■□□□ 1.62
EXOSC4-202ENST00000525936 LTBP3Q9NS15 1303 aa25.15■■□□□ 1.62
EXOSC4-202ENST00000525936 SBF1O95248 1867 aa25.15■■□□□ 1.62
EXOSC4-202ENST00000525936 CASP7P55210 303 aa25.15■■□□□ 1.62
EXOSC4-202ENST00000525936 SMC4Q9NTJ3 1288 aa25.15■■□□□ 1.62
EXOSC4-202ENST00000525936 PDE8AO60658 829 aa25.14■■□□□ 1.62
EXOSC4-202ENST00000525936 BBOX1O75936 387 aa25.14■■□□□ 1.62
EXOSC4-202ENST00000525936 OLFM4Q6UX06 510 aa25.14■■□□□ 1.62
EXOSC4-202ENST00000525936 RASSF7Q02833 373 aa25.13■■□□□ 1.61
EXOSC4-202ENST00000525936 CCDC93Q567U6 631 aa25.13■■□□□ 1.61
EXOSC4-202ENST00000525936 C9orf131Q5VYM1 1079 aa25.13■■□□□ 1.61
EXOSC4-202ENST00000525936 CC2D2BQ6DHV5 1058 aa25.13■■□□□ 1.61
EXOSC4-202ENST00000525936 DDX46Q7L014 1031 aaKnown RBP25.13■■□□□ 1.61
EXOSC4-202ENST00000525936 ALDH1L1O75891 902 aa25.12■■□□□ 1.61
EXOSC4-202ENST00000525936 RTKN2Q8IZC4 609 aa25.12■■□□□ 1.61
EXOSC4-202ENST00000525936 PPEF1O14829 653 aaPredicted RBP25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 LMNB1P20700 586 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms