RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 G2E3Q7L622 706 aa19.33■□□□□ 0.68
SF3B2-202ENST00000524475 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.68
SF3B2-202ENST00000524475 PI4KAP2A4QPH2 592 aa19.32■□□□□ 0.68
SF3B2-202ENST00000524475 YBX3P16989 372 aaKnown RBP eCLIP19.32■□□□□ 0.686e-11■□□□□ 9.7
SF3B2-202ENST00000524475 GTF2E1P29083 439 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-202ENST00000524475 CHRNA5P30532 468 aa19.32■□□□□ 0.68
SF3B2-202ENST00000524475 SLC10A5Q5PT55 438 aa19.32■□□□□ 0.68
SF3B2-202ENST00000524475 C2CD5Q86YS7 1000 aa19.32■□□□□ 0.68
SF3B2-202ENST00000524475 PI4KAP1Q8N8J0 262 aa19.32■□□□□ 0.68
SF3B2-202ENST00000524475 SRGNP10124 158 aa19.31■□□□□ 0.68
SF3B2-202ENST00000524475 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
SF3B2-202ENST00000524475 STYK1Q6J9G0 422 aa19.31■□□□□ 0.68
SF3B2-202ENST00000524475 CCDC191Q8NCU4 936 aa19.31■□□□□ 0.68
SF3B2-202ENST00000524475 MAP3K2Q9Y2U5 619 aa19.31■□□□□ 0.68
SF3B2-202ENST00000524475 SH3TC1Q8TE82 1336 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 LAMB2P55268 1798 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 FAM177BA6PVY3 158 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
SF3B2-202ENST00000524475 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
SF3B2-202ENST00000524475 ERFEQ4G0M1 354 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 DALRD3Q5D0E6 543 aaKnown RBP19.3■□□□□ 0.68
SF3B2-202ENST00000524475 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 CCDC24Q8N4L8 307 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 MASTLQ96GX5 879 aa19.3■□□□□ 0.68
SF3B2-202ENST00000524475 CHD4Q14839 1912 aa19.29■□□□□ 0.68
SF3B2-202ENST00000524475 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
SF3B2-202ENST00000524475 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
SF3B2-202ENST00000524475 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
SF3B2-202ENST00000524475 SSH1Q8WYL5 1049 aa19.29■□□□□ 0.68
SF3B2-202ENST00000524475 MYD88Q99836 296 aa19.29■□□□□ 0.68
SF3B2-202ENST00000524475 TRMT112Q9UI30 125 aaKnown RBP19.29■□□□□ 0.68
SF3B2-202ENST00000524475 NPR1P16066 1061 aa19.28■□□□□ 0.68
SF3B2-202ENST00000524475 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
SF3B2-202ENST00000524475 DNAAF4Q8WXU2 420 aa19.28■□□□□ 0.68
SF3B2-202ENST00000524475 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
SF3B2-202ENST00000524475 PTPRCP08575 1304 aa19.27■□□□□ 0.68
SF3B2-202ENST00000524475 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
SF3B2-202ENST00000524475 PELP1Q8IZL8 1130 aaKnown RBP19.27■□□□□ 0.68
SF3B2-202ENST00000524475 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
SF3B2-202ENST00000524475 CNKSR1Q969H4 720 aa19.27■□□□□ 0.68
SF3B2-202ENST00000524475 CWC25Q9NXE8 425 aaPredicted RBP19.27■□□□□ 0.68
SF3B2-202ENST00000524475 BCS1LQ9Y276 419 aa19.27■□□□□ 0.68
SF3B2-202ENST00000524475 HSP90B1P14625 803 aaKnown RBP19.26■□□□□ 0.67
SF3B2-202ENST00000524475 HOXA10P31260 410 aaPredicted RBP19.26■□□□□ 0.67
SF3B2-202ENST00000524475 NLRP3Q96P20 1036 aa19.26■□□□□ 0.67
SF3B2-202ENST00000524475 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
SF3B2-202ENST00000524475 LINS1Q8NG48 757 aa19.25■□□□□ 0.67
SF3B2-202ENST00000524475 NEURL1BA8MQ27 555 aa19.24■□□□□ 0.67
SF3B2-202ENST00000524475 ALDH1B1P30837 517 aa19.24■□□□□ 0.67
SF3B2-202ENST00000524475 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.674e-19■□□□□ 9.7
SF3B2-202ENST00000524475 CDHR2Q9BYE9 1310 aa19.24■□□□□ 0.67
SF3B2-202ENST00000524475 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
SF3B2-202ENST00000524475 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
SF3B2-202ENST00000524475 FAM89AQ96GI7 184 aa19.23■□□□□ 0.67
SF3B2-202ENST00000524475 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
SF3B2-202ENST00000524475 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
SF3B2-202ENST00000524475 BEND3Q5T5X7 828 aa19.22■□□□□ 0.67
SF3B2-202ENST00000524475 SYNE4Q8N205 404 aa19.22■□□□□ 0.67
SF3B2-202ENST00000524475 CRAMP1Q96RY5 1269 aa19.22■□□□□ 0.67
SF3B2-202ENST00000524475 IRS4O14654 1257 aaPredicted RBP19.21■□□□□ 0.67
SF3B2-202ENST00000524475 GCKRQ14397 625 aa19.21■□□□□ 0.67
SF3B2-202ENST00000524475 SF3B3Q15393 1217 aaKnown RBP19.21■□□□□ 0.67
SF3B2-202ENST00000524475 CWF19L2Q2TBE0 894 aaKnown RBP19.21■□□□□ 0.67
SF3B2-202ENST00000524475 SOGA3Q5TF21 947 aa19.21■□□□□ 0.67
SF3B2-202ENST00000524475 PRPF40BQ6NWY9 871 aaKnown RBP19.21■□□□□ 0.67
SF3B2-202ENST00000524475 C3orf67Q6ZVT6 689 aa19.21■□□□□ 0.67
SF3B2-202ENST00000524475 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
SF3B2-202ENST00000524475 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
SF3B2-202ENST00000524475 MYH3P11055 1940 aa19.2■□□□□ 0.66
SF3B2-202ENST00000524475 F6X3S4 739 aa19.2■□□□□ 0.66
SF3B2-202ENST00000524475 ALDH1L1O75891 902 aa19.2■□□□□ 0.66
SF3B2-202ENST00000524475 HCLS1P14317 486 aaPredicted RBP19.2■□□□□ 0.66
SF3B2-202ENST00000524475 C7orf43Q8WVR3 580 aa19.2■□□□□ 0.66
SF3B2-202ENST00000524475 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
SF3B2-202ENST00000524475 KIF16BQ96L93 1317 aa19.2■□□□□ 0.66
SF3B2-202ENST00000524475 FER1L6Q2WGJ9 1857 aa19.2■□□□□ 0.66
SF3B2-202ENST00000524475 H7C1W4 665 aa19.19■□□□□ 0.66
SF3B2-202ENST00000524475 BCL2L13Q9BXK5 485 aa19.19■□□□□ 0.66
SF3B2-202ENST00000524475 ARHGAP45Q92619 1136 aa19.18■□□□□ 0.66
SF3B2-202ENST00000524475 PLA2G12BQ9BX93 195 aa19.18■□□□□ 0.66
SF3B2-202ENST00000524475 PDE8AO60658 829 aa19.17■□□□□ 0.66
SF3B2-202ENST00000524475 CASP7P55210 303 aa19.17■□□□□ 0.66
SF3B2-202ENST00000524475 CC2D2BQ6DHV5 1058 aa19.17■□□□□ 0.66
SF3B2-202ENST00000524475 LTBP3Q9NS15 1303 aa19.17■□□□□ 0.66
SF3B2-202ENST00000524475 SNED1Q8TER0 1413 aa19.17■□□□□ 0.66
SF3B2-202ENST00000524475 GRIPAP1Q4V328 841 aa19.16■□□□□ 0.66
SF3B2-202ENST00000524475 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
SF3B2-202ENST00000524475 DDX46Q7L014 1031 aaKnown RBP19.16■□□□□ 0.66
SF3B2-202ENST00000524475 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
SF3B2-202ENST00000524475 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
SF3B2-202ENST00000524475 ABCC4O15439 1325 aa19.16■□□□□ 0.66
SF3B2-202ENST00000524475 RTL9Q8NET4 1388 aa19.16■□□□□ 0.66
SF3B2-202ENST00000524475 SBF1O95248 1867 aa19.16■□□□□ 0.66
SF3B2-202ENST00000524475 C21orf2O43822 256 aa19.15■□□□□ 0.66
SF3B2-202ENST00000524475 BBOX1O75936 387 aa19.15■□□□□ 0.66
SF3B2-202ENST00000524475 UBE3BQ7Z3V4 1068 aa19.15■□□□□ 0.66
SF3B2-202ENST00000524475 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
SF3B2-202ENST00000524475 GRAPQ13588 217 aa19.14■□□□□ 0.65
SF3B2-202ENST00000524475 CCDC152Q4G0S7 254 aa19.14■□□□□ 0.65
SF3B2-202ENST00000524475 CCDC93Q567U6 631 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms