RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 GPC2Q8N158 579 aa34.31■■■■□ 3.08
PVT1-219ENST00000523427 EIF6P56537 245 aaKnown RBP34.3■■■■□ 3.08
PVT1-219ENST00000523427 SLC51AQ86UW1 340 aa34.3■■■■□ 3.08
PVT1-219ENST00000523427 PSMD1Q99460 953 aa34.3■■■■□ 3.08
PVT1-219ENST00000523427 SUSD4Q5VX71 490 aa34.29■■■■□ 3.08
PVT1-219ENST00000523427 UBN2Q6ZU65 1347 aa34.29■■■■□ 3.08
PVT1-219ENST00000523427 LAMB4A4D0S4 1761 aa34.27■■■■□ 3.08
PVT1-219ENST00000523427 CC2D2BQ6DHV5 1058 aa34.27■■■■□ 3.08
PVT1-219ENST00000523427 LARGE2Q8N3Y3 721 aa34.27■■■■□ 3.08
PVT1-219ENST00000523427 NFE2L2Q16236 605 aa34.26■■■■□ 3.08
PVT1-219ENST00000523427 ABT1Q9ULW3 272 aaKnown RBP34.26■■■■□ 3.08
PVT1-219ENST00000523427 LMOD1P29536 600 aaPredicted RBP34.25■■■■□ 3.07
PVT1-219ENST00000523427 CTCFP49711 727 aaPredicted RBP34.25■■■■□ 3.07
PVT1-219ENST00000523427 DEFB115Q30KQ5 88 aa34.25■■■■□ 3.07
PVT1-219ENST00000523427 RBM17Q96I25 401 aaKnown RBP34.25■■■■□ 3.07
PVT1-219ENST00000523427 NUP98P52948 1817 aa34.23■■■■□ 3.07
PVT1-219ENST00000523427 PPEF1O14829 653 aaPredicted RBP34.23■■■■□ 3.07
PVT1-219ENST00000523427 HOXA10P31260 410 aaPredicted RBP34.23■■■■□ 3.07
PVT1-219ENST00000523427 C3orf67Q6ZVT6 689 aa34.23■■■■□ 3.07
PVT1-219ENST00000523427 PLEKHF1Q96S99 279 aa34.23■■■■□ 3.07
PVT1-219ENST00000523427 SNED1Q8TER0 1413 aa34.22■■■■□ 3.07
PVT1-219ENST00000523427 PRDM10Q9NQV6 1147 aa34.22■■■■□ 3.07
PVT1-219ENST00000523427 MAPK8IP3Q9UPT6 1336 aa34.22■■■■□ 3.07
PVT1-219ENST00000523427 DLG5Q8TDM6 1919 aa34.22■■■■□ 3.07
PVT1-219ENST00000523427 COL4A5P29400 1685 aa34.22■■■■□ 3.07
PVT1-219ENST00000523427 EIF2S2P20042 333 aaKnown RBP34.21■■■■□ 3.07
PVT1-219ENST00000523427 EPS15P42566 896 aa34.21■■■■□ 3.07
PVT1-219ENST00000523427 LBX1P52954 281 aa34.21■■■■□ 3.07
PVT1-219ENST00000523427 FMR1Q06787 632 aaKnown RBP eCLIP34.21■■■■□ 3.07
PVT1-219ENST00000523427 ZNF34Q8IZ26 560 aa34.21■■■■□ 3.07
PVT1-219ENST00000523427 KDM3BQ7LBC6 1761 aa34.21■■■■□ 3.07
PVT1-219ENST00000523427 NTSR2O95665 410 aa34.2■■■■□ 3.07
PVT1-219ENST00000523427 CRAMP1Q96RY5 1269 aa34.2■■■■□ 3.07
PVT1-219ENST00000523427 WBP1LQ9NX94 342 aa34.2■■■■□ 3.07
PVT1-219ENST00000523427 ADAMTSL1Q8N6G6 1762 aa34.19■■■■□ 3.06
PVT1-219ENST00000523427 GIGYF2Q6Y7W6 1299 aaKnown RBP34.19■■■■□ 3.06
PVT1-219ENST00000523427 RASSF10A6NK89 507 aa34.18■■■■□ 3.06
PVT1-219ENST00000523427 PAXIP1Q6ZW49 1069 aaPredicted RBP34.18■■■■□ 3.06
PVT1-219ENST00000523427 PPP1R42Q7Z4L9 355 aa34.18■■■■□ 3.06
PVT1-219ENST00000523427 NIM1KQ8IY84 436 aa34.18■■■■□ 3.06
PVT1-219ENST00000523427 TMX4Q9H1E5 349 aaPredicted RBP34.18■■■■□ 3.06
PVT1-219ENST00000523427 DDX21Q9NR30 783 aaKnown RBP eCLIP34.18■■■■□ 3.06
PVT1-219ENST00000523427 TSPYL4Q9UJ04 414 aa34.18■■■■□ 3.06
PVT1-219ENST00000523427 SCNN1DP51172 638 aa34.17■■■■□ 3.06
PVT1-219ENST00000523427 GRM1Q13255 1194 aa34.17■■■■□ 3.06
PVT1-219ENST00000523427 NLRP3Q96P20 1036 aa34.17■■■■□ 3.06
PVT1-219ENST00000523427 WDR33Q9C0J8 1336 aaKnown RBP34.17■■■■□ 3.06
PVT1-219ENST00000523427 PPIP5K2O43314 1243 aa34.16■■■■□ 3.06
PVT1-219ENST00000523427 ANXA1P04083 346 aa34.16■■■■□ 3.06
PVT1-219ENST00000523427 IBTKQ9P2D0 1353 aaPredicted RBP34.15■■■■□ 3.06
PVT1-219ENST00000523427 AOC3Q16853 763 aa34.14■■■■□ 3.06
PVT1-219ENST00000523427 GRIPAP1Q4V328 841 aa34.14■■■■□ 3.06
PVT1-219ENST00000523427 PNNQ9H307 717 aaKnown RBP34.14■■■■□ 3.06
PVT1-219ENST00000523427 PARP10Q53GL7 1025 aa34.13■■■■□ 3.05
PVT1-219ENST00000523427 NECTIN2Q92692 538 aa34.13■■■■□ 3.05
PVT1-219ENST00000523427 UTP14AQ9BVJ6 771 aaKnown RBP34.13■■■■□ 3.05
PVT1-219ENST00000523427 RIC1Q4ADV7 1423 aa34.13■■■■□ 3.05
PVT1-219ENST00000523427 TRAF5O00463 557 aa34.12■■■■□ 3.05
PVT1-219ENST00000523427 LTBP1Q14766 1721 aa34.12■■■■□ 3.05
PVT1-219ENST00000523427 ERBB4Q15303 1308 aa34.11■■■■□ 3.05
PVT1-219ENST00000523427 PROSER3Q2NL68 480 aa34.11■■■■□ 3.05
PVT1-219ENST00000523427 HSPA8P11142 646 aaKnown RBP34.09■■■■□ 3.05
PVT1-219ENST00000523427 RIPK4P57078 832 aa34.09■■■■□ 3.05
PVT1-219ENST00000523427 MAP2K1Q02750 393 aaPredicted RBP34.09■■■■□ 3.05
PVT1-219ENST00000523427 AIMP1Q12904 312 aaKnown RBP34.09■■■■□ 3.05
PVT1-219ENST00000523427 PDIA6Q15084 440 aa34.09■■■■□ 3.05
PVT1-219ENST00000523427 USP50Q70EL3 339 aaPredicted RBP34.09■■■■□ 3.05
PVT1-219ENST00000523427 ATP6V0A2Q9Y487 856 aa34.09■■■■□ 3.05
PVT1-219ENST00000523427 ZNF428Q96B54 188 aa34.08■■■■□ 3.05
PVT1-219ENST00000523427 ABCC4O15439 1325 aa34.07■■■■□ 3.05
PVT1-219ENST00000523427 CYP4F22Q6NT55 531 aa34.07■■■■□ 3.04
PVT1-219ENST00000523427 CAPNS2Q96L46 248 aa34.07■■■■□ 3.04
PVT1-219ENST00000523427 HCLS1P14317 486 aaPredicted RBP34.06■■■■□ 3.04
PVT1-219ENST00000523427 LRP10Q7Z4F1 713 aa34.06■■■■□ 3.04
PVT1-219ENST00000523427 CXCL9Q07325 125 aa34.05■■■■□ 3.04
PVT1-219ENST00000523427 SLC10A5Q5PT55 438 aa34.05■■■■□ 3.04
PVT1-219ENST00000523427 CST9Q5W186 159 aa34.04■■■■□ 3.04
PVT1-219ENST00000523427 DPP8Q6V1X1 898 aaPredicted RBP34.04■■■■□ 3.04
PVT1-219ENST00000523427 COPS6Q7L5N1 327 aa34.04■■■■□ 3.04
PVT1-219ENST00000523427 GPRC5DQ9NZD1 345 aa34.04■■■■□ 3.04
PVT1-219ENST00000523427 ZNRF3Q9ULT6 936 aa34.04■■■■□ 3.04
PVT1-219ENST00000523427 SUPT20HQ8NEM7 779 aa34.03■■■■□ 3.04
PVT1-219ENST00000523427 ADARB2Q9NS39 739 aaKnown RBP34.03■■■■□ 3.04
PVT1-219ENST00000523427 ECE1P42892 770 aa34.02■■■■□ 3.04
PVT1-219ENST00000523427 MPNDQ8N594 471 aa34.02■■■■□ 3.04
PVT1-219ENST00000523427 XAGE3Q8WTP9 111 aa34.02■■■■□ 3.04
PVT1-219ENST00000523427 GPR101Q96P66 508 aaPredicted RBP34.02■■■■□ 3.04
PVT1-219ENST00000523427 BEGAINQ9BUH8 593 aa34.02■■■■□ 3.04
PVT1-219ENST00000523427 GMPSP49915 693 aaPredicted RBP34.01■■■■□ 3.03
PVT1-219ENST00000523427 RAD17O75943 681 aa34■■■■□ 3.03
PVT1-219ENST00000523427 NLRP10Q86W26 655 aa34■■■■□ 3.03
PVT1-219ENST00000523427 BCL2L13Q9BXK5 485 aa34■■■■□ 3.03
PVT1-219ENST00000523427 TRMT112Q9UI30 125 aaKnown RBP34■■■■□ 3.03
PVT1-219ENST00000523427 BBOX1O75936 387 aa33.99■■■■□ 3.03
PVT1-219ENST00000523427 NEUROD2Q15784 382 aa33.99■■■■□ 3.03
PVT1-219ENST00000523427 HSP90AB3PQ58FF7 597 aa33.99■■■■□ 3.03
PVT1-219ENST00000523427 DDX46Q7L014 1031 aaKnown RBP33.99■■■■□ 3.03
PVT1-219ENST00000523427 SP8Q8IXZ3 490 aa33.99■■■■□ 3.03
PVT1-219ENST00000523427 CIAPIN1Q6FI81 312 aa33.98■■■■□ 3.03
PVT1-219ENST00000523427 VPS33BQ9H267 617 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 281.5 ms