RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CCDC93Q567U6 631 aa24.28■■□□□ 1.48
SPIDR-220ENST00000522900 C8orf58Q8NAV2 365 aa24.28■■□□□ 1.48
SPIDR-220ENST00000522900 ZNF428Q96B54 188 aa24.28■■□□□ 1.48
SPIDR-220ENST00000522900 NLRP10Q86W26 655 aa24.27■■□□□ 1.48
SPIDR-220ENST00000522900 SYNE4Q8N205 404 aa24.27■■□□□ 1.48
SPIDR-220ENST00000522900 FER1L6Q2WGJ9 1857 aa24.26■■□□□ 1.47
SPIDR-220ENST00000522900 HSPA6P17066 643 aa24.26■■□□□ 1.47
SPIDR-220ENST00000522900 HOXA10P31260 410 aaPredicted RBP24.26■■□□□ 1.47
SPIDR-220ENST00000522900 RPGRQ92834 1020 aaKnown RBP24.26■■□□□ 1.47
SPIDR-220ENST00000522900 HSP90AB3PQ58FF7 597 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 SLC10A5Q5PT55 438 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 ANKRD13DQ6ZTN6 518 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 SLC51AQ86UW1 340 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 PLBD2Q8NHP8 589 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 CACNA1SQ13698 1873 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 RIC1Q4ADV7 1423 aa24.25■■□□□ 1.47
SPIDR-220ENST00000522900 HYPKQ9NX55 129 aa24.24■■□□□ 1.47
SPIDR-220ENST00000522900 ARFGEF2Q9Y6D5 1785 aa24.24■■□□□ 1.47
SPIDR-220ENST00000522900 FKBP4Q02790 459 aaKnown RBP eCLIP24.23■■□□□ 1.47
SPIDR-220ENST00000522900 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
SPIDR-220ENST00000522900 C16orf71Q8IYS4 520 aaPredicted RBP24.23■■□□□ 1.47
SPIDR-220ENST00000522900 TSPYL6Q8N831 410 aa24.23■■□□□ 1.47
SPIDR-220ENST00000522900 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
SPIDR-220ENST00000522900 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
SPIDR-220ENST00000522900 ZNF277Q9NRM2 450 aaPredicted RBP24.23■■□□□ 1.47
SPIDR-220ENST00000522900 CCDC88AQ3V6T2 1871 aa24.22■■□□□ 1.47
SPIDR-220ENST00000522900 POTECB2RU33 542 aa24.22■■□□□ 1.47
SPIDR-220ENST00000522900 HCLS1P14317 486 aaPredicted RBP24.22■■□□□ 1.47
SPIDR-220ENST00000522900 CCDC27Q2M243 656 aa24.22■■□□□ 1.47
SPIDR-220ENST00000522900 RTKN2Q8IZC4 609 aa24.22■■□□□ 1.47
SPIDR-220ENST00000522900 RBM46Q8TBY0 533 aaKnown RBP24.22■■□□□ 1.47
SPIDR-220ENST00000522900 RBM17Q96I25 401 aaKnown RBP24.22■■□□□ 1.47
SPIDR-220ENST00000522900 PHAXQ9H814 394 aaKnown RBP24.22■■□□□ 1.47
SPIDR-220ENST00000522900 TRMT112Q9UI30 125 aaKnown RBP24.22■■□□□ 1.47
SPIDR-220ENST00000522900 ATP5J2-PTCD1G3V325 749 aa24.21■■□□□ 1.47
SPIDR-220ENST00000522900 TCERG1O14776 1098 aaKnown RBP24.21■■□□□ 1.47
SPIDR-220ENST00000522900 DPY19L2Q6NUT2 758 aa24.21■■□□□ 1.47
SPIDR-220ENST00000522900 CRAMP1Q96RY5 1269 aa24.21■■□□□ 1.47
SPIDR-220ENST00000522900 VEGFAP15692 232 aaPredicted RBP24.2■■□□□ 1.46
SPIDR-220ENST00000522900 ISCA1Q9BUE6 129 aa24.2■■□□□ 1.46
SPIDR-220ENST00000522900 TIAM2Q8IVF5 1701 aa24.19■■□□□ 1.46
SPIDR-220ENST00000522900 DDNO94850 711 aaPredicted RBP24.19■■□□□ 1.46
SPIDR-220ENST00000522900 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
SPIDR-220ENST00000522900 SNED1Q8TER0 1413 aa24.18■■□□□ 1.46
SPIDR-220ENST00000522900 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
SPIDR-220ENST00000522900 CEP350Q5VT06 3117 aa24.18■■□□□ 1.46
SPIDR-220ENST00000522900 SH3TC1Q8TE82 1336 aa24.17■■□□□ 1.46
SPIDR-220ENST00000522900 PPEF1O14829 653 aaPredicted RBP24.17■■□□□ 1.46
SPIDR-220ENST00000522900 RIC3Q7Z5B4 369 aa24.16■■□□□ 1.46
SPIDR-220ENST00000522900 FAM89AQ96GI7 184 aa24.16■■□□□ 1.46
SPIDR-220ENST00000522900 ABCC4O15439 1325 aa24.15■■□□□ 1.46
SPIDR-220ENST00000522900 IARSP41252 1262 aaKnown RBP24.15■■□□□ 1.46
SPIDR-220ENST00000522900 CCDC30Q5VVM6 783 aa24.15■■□□□ 1.46
SPIDR-220ENST00000522900 CC2D2BQ6DHV5 1058 aa24.15■■□□□ 1.46
SPIDR-220ENST00000522900 PSMD1Q99460 953 aa24.15■■□□□ 1.46
SPIDR-220ENST00000522900 ANKRD36CQ5JPF3 1778 aa24.14■■□□□ 1.46
SPIDR-220ENST00000522900 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.45
SPIDR-220ENST00000522900 RTL5Q5HYW3 569 aaPredicted RBP24.14■■□□□ 1.45
SPIDR-220ENST00000522900 DICER1Q9UPY3 1922 aaKnown RBP24.14■■□□□ 1.45
SPIDR-220ENST00000522900 GOLGA2Q08379 1002 aa24.13■■□□□ 1.45
SPIDR-220ENST00000522900 FSTL1Q12841 308 aa24.13■■□□□ 1.45
SPIDR-220ENST00000522900 TRIM28Q13263 835 aaKnown RBP24.13■■□□□ 1.45
SPIDR-220ENST00000522900 FAM9BQ8IZU0 186 aa24.13■■□□□ 1.45
SPIDR-220ENST00000522900 IL16Q14005 1332 aa24.12■■□□□ 1.45
SPIDR-220ENST00000522900 ZNF541Q9H0D2 1346 aa24.12■■□□□ 1.45
SPIDR-220ENST00000522900 ATP6V0A2Q9Y487 856 aa24.12■■□□□ 1.45
SPIDR-220ENST00000522900 APLP1P51693 650 aa24.11■■□□□ 1.45
SPIDR-220ENST00000522900 MYD88Q99836 296 aa24.11■■□□□ 1.45
SPIDR-220ENST00000522900 WDR90Q96KV7 1748 aa24.1■■□□□ 1.45
SPIDR-220ENST00000522900 FZD9O00144 591 aa24.1■■□□□ 1.45
SPIDR-220ENST00000522900 TWISTNBQ3B726 338 aaPredicted RBP24.1■■□□□ 1.45
SPIDR-220ENST00000522900 SMC1BQ8NDV3 1235 aa24.1■■□□□ 1.45
SPIDR-220ENST00000522900 BBOX1O75936 387 aa24.09■■□□□ 1.45
SPIDR-220ENST00000522900 HTRA3P83110 453 aa24.09■■□□□ 1.45
SPIDR-220ENST00000522900 DDX46Q7L014 1031 aaKnown RBP24.09■■□□□ 1.45
SPIDR-220ENST00000522900 GRAPQ13588 217 aa24.08■■□□□ 1.45
SPIDR-220ENST00000522900 GRIPAP1Q4V328 841 aa24.08■■□□□ 1.45
SPIDR-220ENST00000522900 WDR63Q8IWG1 891 aa24.08■■□□□ 1.45
SPIDR-220ENST00000522900 GRAPLQ8TC17 118 aaPredicted RBP24.08■■□□□ 1.45
SPIDR-220ENST00000522900 JARID2Q92833 1246 aaPredicted RBP24.08■■□□□ 1.45
SPIDR-220ENST00000522900 CHMP4AQ9BY43 222 aa24.08■■□□□ 1.45
SPIDR-220ENST00000522900 COL4A5P29400 1685 aa24.08■■□□□ 1.44
SPIDR-220ENST00000522900 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.44
SPIDR-220ENST00000522900 IRS4O14654 1257 aaPredicted RBP24.07■■□□□ 1.44
SPIDR-220ENST00000522900 POTEIP0CG38 1075 aa24.07■■□□□ 1.44
SPIDR-220ENST00000522900 POTEJP0CG39 1038 aa24.07■■□□□ 1.44
SPIDR-220ENST00000522900 SF3B3Q15393 1217 aaKnown RBP24.07■■□□□ 1.44
SPIDR-220ENST00000522900 G2E3Q7L622 706 aa24.07■■□□□ 1.44
SPIDR-220ENST00000522900 SP8Q8IXZ3 490 aa24.07■■□□□ 1.44
SPIDR-220ENST00000522900 L3MBTL3Q96JM7 780 aaPredicted RBP24.07■■□□□ 1.44
SPIDR-220ENST00000522900 METTL22Q9BUU2 404 aaPredicted RBP24.07■■□□□ 1.44
SPIDR-220ENST00000522900 SPINK5Q9NQ38 1064 aaPredicted RBP24.07■■□□□ 1.44
SPIDR-220ENST00000522900 LARGE2Q8N3Y3 721 aa24.06■■□□□ 1.44
SPIDR-220ENST00000522900 DNAJC5GQ8N7S2 189 aa24.06■■□□□ 1.44
SPIDR-220ENST00000522900 ZBTB38Q8NAP3 1195 aaPredicted RBP24.06■■□□□ 1.44
SPIDR-220ENST00000522900 JDP2Q8WYK2 163 aa24.06■■□□□ 1.44
SPIDR-220ENST00000522900 MAP3K2Q9Y2U5 619 aa24.06■■□□□ 1.44
SPIDR-220ENST00000522900 LAMB2P55268 1798 aa24.06■■□□□ 1.44
SPIDR-220ENST00000522900 PI4KAP2A4QPH2 592 aa24.05■■□□□ 1.44
SPIDR-220ENST00000522900 DDX58O95786 925 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms