RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 TYRO3Q06418 890 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 ORC1Q13415 861 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 WDR44Q5JSH3 913 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 GJD3Q8N144 294 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 CMTR1Q8N1G2 835 aaKnown RBP4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 CEP63Q96MT8 703 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 IRX2Q9BZI1 471 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 ZCCHC2Q9C0B9 1178 aaKnown RBP4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 NEUROD4Q9HD90 331 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 KIAA1522Q9P206 1035 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 HCN2Q9UL51 889 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 DYRK1BQ9Y463 629 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 GJA3Q9Y6H8 435 aa4.38□□□□□ -1.71
CKS1BP7-201ENST00000522230 BICRAQ9NZM4 1560 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 DCDC2BA2VCK2 349 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 POTECB2RU33 542 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 RANGAP1P46060 587 aaPredicted RBP4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 ARSDP51689 593 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 FMR1Q06787 632 aaKnown RBP eCLIP4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 EHHADHQ08426 723 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 DSC3Q14574 896 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 FAM161BQ96MY7 647 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 FOXD3Q9UJU5 478 aaPredicted RBP4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 AMOTL2Q9Y2J4 779 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 RTCBQ9Y3I0 505 aaKnown RBP4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 KCNMB2Q9Y691 235 aa4.37□□□□□ -1.71
CKS1BP7-201ENST00000522230 WIZO95785 1651 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 PNMA6FA0A0J9YX94 578 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 SLC35F4A4IF30 521 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 PLCB3Q01970 1234 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 SFSWAPQ12872 951 aaKnown RBP4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 DBN1Q16643 649 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 EAPPQ56P03 285 aaPredicted RBP4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 IER5Q5VY09 327 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 USPL1Q5W0Q7 1092 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 KRT25Q7Z3Z0 450 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 PGBD3Q8N328 593 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 CCDC155Q8N6L0 562 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 MRRFQ96E11 262 aaKnown RBP4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 CRISPLD1Q9H336 500 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 BRD7Q9NPI1 651 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 STRN4Q9NRL3 753 aa4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.36□□□□□ -1.71
CKS1BP7-201ENST00000522230 E9PSI1 815 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 UBAP1LF5GYI3 381 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 GPR25O00155 361 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 KHNYNO15037 678 aaKnown RBP4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 POLR3DP05423 398 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 ERCC3P19447 782 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 UBAP2LQ14157 1087 aaKnown RBP4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 Q6ZNB5 142 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 RAB44Q7Z6P3 723 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 PIK3R5Q8WYR1 880 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 TRIM47Q96LD4 638 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 DMRTB1Q96MA1 342 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 CFHR5Q9BXR6 569 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 NUCKS1Q9H1E3 243 aaKnown RBP4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 TMEM63CQ9P1W3 806 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 ANKIB1Q9P2G1 1089 aa4.35□□□□□ -1.71
CKS1BP7-201ENST00000522230 ATXN7O15265 892 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 LDHBP07195 334 aaKnown RBP4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 IRS1P35568 1242 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 VEGFBP49765 207 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 PDE3BQ13370 1112 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 LAPTM4AQ15012 233 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 HIF1AQ16665 826 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 EFHC2Q5JST6 749 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 PI16Q6UXB8 463 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 ZNF438Q7Z4V0 828 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 GTPBP3Q969Y2 492 aaKnown RBP4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 ZNF837Q96EG3 531 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 ABHD17AQ96GS6 310 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 CITED4Q96RK1 184 aa4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 DUSP9Q99956 384 aaKnown RBP4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 GPC6Q9Y625 555 aaPredicted RBP4.34□□□□□ -1.71
CKS1BP7-201ENST00000522230 CDC14CA4D256 554 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 EIF1AYO14602 144 aaKnown RBP4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 BNIP3LO60238 219 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 XYLBO75191 536 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 TNFRSF21O75509 655 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 SASH3O75995 380 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 CYP2E1P05181 493 aaPredicted RBP4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 PCSK2P16519 638 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 CD33P20138 364 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 USP5P45974 858 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 ENOX2Q16206 610 aaKnown RBP4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 NLRP8Q86W28 1048 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 TTC16Q8NEE8 873 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 ALKBH8Q96BT7 664 aaKnown RBP4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 CSRNP1Q96S65 589 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 SLC30A3Q99726 388 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 ELP3Q9H9T3 547 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 CNTN3Q9P232 1028 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 PARP2Q9UGN5 583 aa4.33□□□□□ -1.72
CKS1BP7-201ENST00000522230 C11orf95C9JLR9 678 aaPredicted RBP4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 EREGO14944 169 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 EFSO43281 561 aa4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 MAPTP10636 758 aaKnown RBP4.32□□□□□ -1.72
CKS1BP7-201ENST00000522230 ITGA6P23229 1130 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms