RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SIRT2Q8IXJ6 389 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 ANKRD44Q8N8A2 993 aa26.75■■□□□ 1.87
R3HCC1-208ENST00000522012 H7C1W4 665 aa26.74■■□□□ 1.87
R3HCC1-208ENST00000522012 RTL5Q5HYW3 569 aaPredicted RBP26.74■■□□□ 1.87
R3HCC1-208ENST00000522012 CENPQQ7L2Z9 268 aaPredicted RBP26.74■■□□□ 1.87
R3HCC1-208ENST00000522012 SUCLG2Q96I99 432 aa26.74■■□□□ 1.87
R3HCC1-208ENST00000522012 NIP7Q9Y221 180 aaKnown RBP eCLIP26.73■■□□□ 1.87
R3HCC1-208ENST00000522012 KDM2BQ8NHM5 1336 aa26.73■■□□□ 1.87
R3HCC1-208ENST00000522012 RGL2O15211 777 aa26.72■■□□□ 1.87
R3HCC1-208ENST00000522012 BCL2L12Q9HB09 334 aa26.72■■□□□ 1.87
R3HCC1-208ENST00000522012 USP42Q9H9J4 1324 aaKnown RBP26.72■■□□□ 1.87
R3HCC1-208ENST00000522012 UBN2Q6ZU65 1347 aa26.71■■□□□ 1.87
R3HCC1-208ENST00000522012 CASP7P55210 303 aa26.7■■□□□ 1.87
R3HCC1-208ENST00000522012 ATP8B2P98198 1209 aa26.7■■□□□ 1.87
R3HCC1-208ENST00000522012 RGPD3A6NKT7 1758 aaPredicted RBP26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 RGPD4Q7Z3J3 1758 aa26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 PCCAP05165 728 aaPredicted RBP26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 PARP10Q53GL7 1025 aa26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 BICDL1Q6ZP65 573 aa26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 ZBTB38Q8NAP3 1195 aaPredicted RBP26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 FAM89AQ96GI7 184 aa26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 TRMT112Q9UI30 125 aaKnown RBP26.7■■□□□ 1.86
R3HCC1-208ENST00000522012 FAM177BA6PVY3 158 aa26.69■■□□□ 1.86
R3HCC1-208ENST00000522012 HMMRO75330 724 aa26.69■■□□□ 1.86
R3HCC1-208ENST00000522012 SUSD4Q5VX71 490 aa26.69■■□□□ 1.86
R3HCC1-208ENST00000522012 TBC1D9BQ66K14 1250 aa26.69■■□□□ 1.86
R3HCC1-208ENST00000522012 KAZALD1Q96I82 304 aa26.69■■□□□ 1.86
R3HCC1-208ENST00000522012 BICC1Q9H694 974 aaKnown RBP26.68■■□□□ 1.86
R3HCC1-208ENST00000522012 PNMA6EA0A0J9YXQ4 647 aa26.67■■□□□ 1.86
R3HCC1-208ENST00000522012 MSH5O43196 834 aa26.67■■□□□ 1.86
R3HCC1-208ENST00000522012 PPP1R42Q7Z4L9 355 aa26.67■■□□□ 1.86
R3HCC1-208ENST00000522012 UTP14AQ9BVJ6 771 aaKnown RBP26.67■■□□□ 1.86
R3HCC1-208ENST00000522012 STK32BQ9NY57 414 aa26.67■■□□□ 1.86
R3HCC1-208ENST00000522012 FLAD1Q8NFF5 587 aa26.66■■□□□ 1.86
R3HCC1-208ENST00000522012 EPHA10Q5JZY3 1008 aa26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 SETDB2Q96T68 719 aa26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 ANO8Q9HCE9 1232 aaPredicted RBP26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 AFDNP55196 1824 aaKnown RBP26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 SRGAP3O43295 1099 aa26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 COL23A1Q86Y22 540 aaPredicted RBP26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 SYNE4Q8N205 404 aa26.65■■□□□ 1.86
R3HCC1-208ENST00000522012 SLC15A2Q16348 729 aa26.64■■□□□ 1.85
R3HCC1-208ENST00000522012 BCORQ6W2J9 1755 aa26.63■■□□□ 1.85
R3HCC1-208ENST00000522012 UBR3Q6ZT12 1888 aa26.63■■□□□ 1.85
R3HCC1-208ENST00000522012 NUP98P52948 1817 aa26.63■■□□□ 1.85
R3HCC1-208ENST00000522012 GYS1P13807 737 aa26.63■■□□□ 1.85
R3HCC1-208ENST00000522012 MTX1Q13505 466 aa26.63■■□□□ 1.85
R3HCC1-208ENST00000522012 SCN7AQ01118 1682 aa26.63■■□□□ 1.85
R3HCC1-208ENST00000522012 CDHR2Q9BYE9 1310 aa26.62■■□□□ 1.85
R3HCC1-208ENST00000522012 FOXO4P98177 505 aa26.62■■□□□ 1.85
R3HCC1-208ENST00000522012 SSH3Q8TE77 659 aa26.62■■□□□ 1.85
R3HCC1-208ENST00000522012 PNPLA7Q6ZV29 1317 aa26.61■■□□□ 1.85
R3HCC1-208ENST00000522012 SH3TC1Q8TE82 1336 aa26.61■■□□□ 1.85
R3HCC1-208ENST00000522012 IRS4O14654 1257 aaPredicted RBP26.61■■□□□ 1.85
R3HCC1-208ENST00000522012 NTSR2O95665 410 aa26.61■■□□□ 1.85
R3HCC1-208ENST00000522012 GCC1Q96CN9 775 aa26.61■■□□□ 1.85
R3HCC1-208ENST00000522012 ANKRD36CQ5JPF3 1778 aa26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 POLA2Q14181 598 aa26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 LMBR1LQ6UX01 489 aa26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 SMC5Q8IY18 1101 aa26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 DCTPP1Q9H773 170 aa26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 NFIXQ14938 502 aa26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 RABL6Q3YEC7 729 aaPredicted RBP26.6■■□□□ 1.85
R3HCC1-208ENST00000522012 C4AP0C0L4 1744 aa26.59■■□□□ 1.85
R3HCC1-208ENST00000522012 NUTM1Q86Y26 1132 aa26.59■■□□□ 1.85
R3HCC1-208ENST00000522012 PLA2G12BQ9BX93 195 aa26.59■■□□□ 1.85
R3HCC1-208ENST00000522012 CHMP3Q9Y3E7 222 aa26.59■■□□□ 1.85
R3HCC1-208ENST00000522012 GTF2E1P29083 439 aaPredicted RBP26.58■■□□□ 1.85
R3HCC1-208ENST00000522012 NBPF5PQ86XG9 351 aaPredicted RBP26.58■■□□□ 1.85
R3HCC1-208ENST00000522012 NYXQ9GZU5 481 aa26.58■■□□□ 1.85
R3HCC1-208ENST00000522012 HCLS1P14317 486 aaPredicted RBP26.56■■□□□ 1.84
R3HCC1-208ENST00000522012 PDE8AO60658 829 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 HSP90B1P14625 803 aaKnown RBP26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 ERFEQ4G0M1 354 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 TPTE2Q6XPS3 522 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 PDZRN3Q9UPQ7 1066 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 EXOC6BQ9Y2D4 811 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 NPHP1O15259 732 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 SURF6O75683 361 aaKnown RBP26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 ANKRD45Q5TZF3 282 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 NLGN1Q8N2Q7 840 aa26.55■■□□□ 1.84
R3HCC1-208ENST00000522012 CARMIL3Q8ND23 1372 aa26.54■■□□□ 1.84
R3HCC1-208ENST00000522012 APBB1O00213 710 aa26.54■■□□□ 1.84
R3HCC1-208ENST00000522012 TM4SF1P30408 202 aa26.54■■□□□ 1.84
R3HCC1-208ENST00000522012 CTSWP56202 376 aa26.54■■□□□ 1.84
R3HCC1-208ENST00000522012 CCDC85AQ96PX6 553 aaPredicted RBP26.53■■□□□ 1.84
R3HCC1-208ENST00000522012 PA2G4Q9UQ80 394 aaKnown RBP26.53■■□□□ 1.84
R3HCC1-208ENST00000522012 LRP5O75197 1615 aa26.53■■□□□ 1.84
R3HCC1-208ENST00000522012 CSF1RP07333 972 aa26.52■■□□□ 1.84
R3HCC1-208ENST00000522012 NUCB1Q02818 461 aa26.52■■□□□ 1.84
R3HCC1-208ENST00000522012 SKAP1Q86WV1 359 aa26.52■■□□□ 1.84
R3HCC1-208ENST00000522012 TTLL11Q8NHH1 800 aa26.51■■□□□ 1.83
R3HCC1-208ENST00000522012 ZBTB47Q9UFB7 747 aaPredicted RBP26.51■■□□□ 1.83
R3HCC1-208ENST00000522012 PSDA5PKW4 1024 aaPredicted RBP26.5■■□□□ 1.83
R3HCC1-208ENST00000522012 RFX5P48382 616 aaPredicted RBP26.5■■□□□ 1.83
R3HCC1-208ENST00000522012 KLHDC4Q8TBB5 520 aa26.5■■□□□ 1.83
R3HCC1-208ENST00000522012 SERPINB2P05120 415 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 OS9Q13438 667 aaPredicted RBP26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 CCDC57Q2TAC2 916 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 MSL1Q68DK7 614 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms