RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SNED1Q8TER0 1413 aa19.63■□□□□ 0.73
PRKDC-204ENST00000521331 TMEM88BA6NKF7 163 aa19.63■□□□□ 0.73
PRKDC-204ENST00000521331 GPTP24298 496 aa19.63■□□□□ 0.73
PRKDC-204ENST00000521331 ZBTB3Q9H5J0 574 aa19.63■□□□□ 0.73
PRKDC-204ENST00000521331 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
PRKDC-204ENST00000521331 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
PRKDC-204ENST00000521331 UBN2Q6ZU65 1347 aa19.62■□□□□ 0.73
PRKDC-204ENST00000521331 CAPN15O75808 1086 aa19.62■□□□□ 0.73
PRKDC-204ENST00000521331 ITGBL1O95965 494 aaPredicted RBP19.62■□□□□ 0.73
PRKDC-204ENST00000521331 GIGYF2Q6Y7W6 1299 aaKnown RBP19.62■□□□□ 0.73
PRKDC-204ENST00000521331 ZNF34Q8IZ26 560 aa19.62■□□□□ 0.73
PRKDC-204ENST00000521331 RBM17Q96I25 401 aaKnown RBP19.62■□□□□ 0.73
PRKDC-204ENST00000521331 EIF6P56537 245 aaKnown RBP19.61■□□□□ 0.73
PRKDC-204ENST00000521331 SUSD4Q5VX71 490 aa19.61■□□□□ 0.73
PRKDC-204ENST00000521331 CRAMP1Q96RY5 1269 aa19.61■□□□□ 0.73
PRKDC-204ENST00000521331 NTSR2O95665 410 aa19.6■□□□□ 0.73
PRKDC-204ENST00000521331 PARP10Q53GL7 1025 aa19.6■□□□□ 0.73
PRKDC-204ENST00000521331 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
PRKDC-204ENST00000521331 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
PRKDC-204ENST00000521331 PPEF1O14829 653 aaPredicted RBP19.58■□□□□ 0.72
PRKDC-204ENST00000521331 LMOD1P29536 600 aaPredicted RBP19.58■□□□□ 0.72
PRKDC-204ENST00000521331 CNTROBQ8N137 903 aa19.58■□□□□ 0.72
PRKDC-204ENST00000521331 LARGE2Q8N3Y3 721 aa19.58■□□□□ 0.72
PRKDC-204ENST00000521331 TMX4Q9H1E5 349 aaPredicted RBP19.58■□□□□ 0.72
PRKDC-204ENST00000521331 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.72
PRKDC-204ENST00000521331 VEGFBP49765 207 aa19.57■□□□□ 0.72
PRKDC-204ENST00000521331 AIDAQ96BJ3 306 aa19.57■□□□□ 0.72
PRKDC-204ENST00000521331 NLRP3Q96P20 1036 aa19.57■□□□□ 0.72
PRKDC-204ENST00000521331 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
PRKDC-204ENST00000521331 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
PRKDC-204ENST00000521331 RIPK4P57078 832 aa19.56■□□□□ 0.72
PRKDC-204ENST00000521331 LMOD3Q0VAK6 560 aa19.56■□□□□ 0.72
PRKDC-204ENST00000521331 MAP1SQ66K74 1059 aaPredicted RBP19.56■□□□□ 0.72
PRKDC-204ENST00000521331 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
PRKDC-204ENST00000521331 UTP14AQ9BVJ6 771 aaKnown RBP19.56■□□□□ 0.72
PRKDC-204ENST00000521331 ADAMTSL1Q8N6G6 1762 aa19.56■□□□□ 0.72
PRKDC-204ENST00000521331 NUP98P52948 1817 aa19.55■□□□□ 0.72
PRKDC-204ENST00000521331 FOXN1O15353 648 aa19.55■□□□□ 0.72
PRKDC-204ENST00000521331 EIF2S2P20042 333 aaKnown RBP19.55■□□□□ 0.72
PRKDC-204ENST00000521331 PDIA6Q15084 440 aa19.55■□□□□ 0.72
PRKDC-204ENST00000521331 NIM1KQ8IY84 436 aa19.55■□□□□ 0.72
PRKDC-204ENST00000521331 VPS33BQ9H267 617 aa19.55■□□□□ 0.72
PRKDC-204ENST00000521331 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
PRKDC-204ENST00000521331 RALBP1Q15311 655 aa19.54■□□□□ 0.72
PRKDC-204ENST00000521331 SLC10A5Q5PT55 438 aa19.54■□□□□ 0.72
PRKDC-204ENST00000521331 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
PRKDC-204ENST00000521331 PRDM10Q9NQV6 1147 aa19.54■□□□□ 0.72
PRKDC-204ENST00000521331 COL4A5P29400 1685 aa19.53■□□□□ 0.72
PRKDC-204ENST00000521331 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
PRKDC-204ENST00000521331 CTCFP49711 727 aaPredicted RBP19.53■□□□□ 0.72
PRKDC-204ENST00000521331 SCNN1DP51172 638 aa19.53■□□□□ 0.72
PRKDC-204ENST00000521331 HSP90AB3PQ58FF7 597 aa19.53■□□□□ 0.72
PRKDC-204ENST00000521331 ATP6V0A2Q9Y487 856 aa19.53■□□□□ 0.72
PRKDC-204ENST00000521331 PPIP5K2O43314 1243 aa19.52■□□□□ 0.72
PRKDC-204ENST00000521331 DEFB115Q30KQ5 88 aa19.52■□□□□ 0.72
PRKDC-204ENST00000521331 USP50Q70EL3 339 aaPredicted RBP19.52■□□□□ 0.72
PRKDC-204ENST00000521331 SUPT20HQ8NEM7 779 aa19.52■□□□□ 0.72
PRKDC-204ENST00000521331 DDX21Q9NR30 783 aaKnown RBP eCLIP19.52■□□□□ 0.72
PRKDC-204ENST00000521331 WBP1LQ9NX94 342 aa19.52■□□□□ 0.72
PRKDC-204ENST00000521331 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
PRKDC-204ENST00000521331 EPS15P42566 896 aa19.51■□□□□ 0.71
PRKDC-204ENST00000521331 PROSER3Q2NL68 480 aa19.51■□□□□ 0.71
PRKDC-204ENST00000521331 ABT1Q9ULW3 272 aaKnown RBP19.51■□□□□ 0.71
PRKDC-204ENST00000521331 ABCC4O15439 1325 aa19.51■□□□□ 0.71
PRKDC-204ENST00000521331 BBOX1O75936 387 aa19.5■□□□□ 0.71
PRKDC-204ENST00000521331 RTFDC1Q9BY42 306 aaPredicted RBP19.5■□□□□ 0.71
PRKDC-204ENST00000521331 ANXA1P04083 346 aa19.49■□□□□ 0.71
PRKDC-204ENST00000521331 AOC3Q16853 763 aa19.49■□□□□ 0.71
PRKDC-204ENST00000521331 COPS6Q7L5N1 327 aa19.49■□□□□ 0.71
PRKDC-204ENST00000521331 SLC51AQ86UW1 340 aa19.49■□□□□ 0.71
PRKDC-204ENST00000521331 NLRP10Q86W26 655 aa19.49■□□□□ 0.71
PRKDC-204ENST00000521331 MAP2K1Q02750 393 aaPredicted RBP19.48■□□□□ 0.71
PRKDC-204ENST00000521331 AIMP1Q12904 312 aaKnown RBP19.48■□□□□ 0.71
PRKDC-204ENST00000521331 DPP8Q6V1X1 898 aaPredicted RBP19.48■□□□□ 0.71
PRKDC-204ENST00000521331 XAGE3Q8WTP9 111 aa19.48■□□□□ 0.71
PRKDC-204ENST00000521331 ZNRF3Q9ULT6 936 aa19.48■□□□□ 0.71
PRKDC-204ENST00000521331 WDR33Q9C0J8 1336 aaKnown RBP19.48■□□□□ 0.71
PRKDC-204ENST00000521331 TCIRG1Q13488 830 aa19.47■□□□□ 0.71
PRKDC-204ENST00000521331 DDX46Q7L014 1031 aaKnown RBP19.47■□□□□ 0.71
PRKDC-204ENST00000521331 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
PRKDC-204ENST00000521331 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
PRKDC-204ENST00000521331 TRMT112Q9UI30 125 aaKnown RBP19.47■□□□□ 0.71
PRKDC-204ENST00000521331 LTBP1Q14766 1721 aa19.46■□□□□ 0.71
PRKDC-204ENST00000521331 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
PRKDC-204ENST00000521331 MPNDQ8N594 471 aa19.46■□□□□ 0.71
PRKDC-204ENST00000521331 NECTIN2Q92692 538 aa19.46■□□□□ 0.71
PRKDC-204ENST00000521331 GPRC5DQ9NZD1 345 aa19.46■□□□□ 0.71
PRKDC-204ENST00000521331 SH3TC1Q8TE82 1336 aa19.46■□□□□ 0.71
PRKDC-204ENST00000521331 CHL1O00533 1208 aa19.45■□□□□ 0.7
PRKDC-204ENST00000521331 CXCL9Q07325 125 aa19.45■□□□□ 0.7
PRKDC-204ENST00000521331 KIAA2012Q0VF49 1180 aa19.45■□□□□ 0.7
PRKDC-204ENST00000521331 GRAPQ13588 217 aa19.45■□□□□ 0.7
PRKDC-204ENST00000521331 TMC4Q7Z404 712 aa19.45■□□□□ 0.7
PRKDC-204ENST00000521331 GRAPLQ8TC17 118 aaPredicted RBP19.45■□□□□ 0.7
PRKDC-204ENST00000521331 CDHR2Q9BYE9 1310 aa19.45■□□□□ 0.7
PRKDC-204ENST00000521331 ECE1P42892 770 aa19.44■□□□□ 0.7
PRKDC-204ENST00000521331 LBX1P52954 281 aa19.44■□□□□ 0.7
PRKDC-204ENST00000521331 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
PRKDC-204ENST00000521331 HOXB7P09629 217 aa19.43■□□□□ 0.7
PRKDC-204ENST00000521331 TNIP1Q15025 636 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms