RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
BRD9-216ENST00000518251 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
BRD9-216ENST00000518251 ANXA1P04083 346 aa13.28□□□□□ -0.28
BRD9-216ENST00000518251 INTS3Q68E01 1043 aaKnown RBP13.28□□□□□ -0.28
BRD9-216ENST00000518251 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
BRD9-216ENST00000518251 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
BRD9-216ENST00000518251 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
BRD9-216ENST00000518251 RRAGCQ9HB90 399 aa13.28□□□□□ -0.28
BRD9-216ENST00000518251 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
BRD9-216ENST00000518251 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
BRD9-216ENST00000518251 SBF1O95248 1867 aa13.27□□□□□ -0.28
BRD9-216ENST00000518251 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
BRD9-216ENST00000518251 F6X3S4 739 aa13.26□□□□□ -0.29
BRD9-216ENST00000518251 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
BRD9-216ENST00000518251 NFIXQ14938 502 aa13.26□□□□□ -0.29
BRD9-216ENST00000518251 PDIA6Q15084 440 aa13.26□□□□□ -0.29
BRD9-216ENST00000518251 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
BRD9-216ENST00000518251 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
BRD9-216ENST00000518251 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
BRD9-216ENST00000518251 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
BRD9-216ENST00000518251 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
BRD9-216ENST00000518251 MYL6BP14649 208 aa13.25□□□□□ -0.29
BRD9-216ENST00000518251 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
BRD9-216ENST00000518251 ARFGEF2Q9Y6D5 1785 aa13.25□□□□□ -0.29
BRD9-216ENST00000518251 PCNTO95613 3336 aa13.24□□□□□ -0.29
BRD9-216ENST00000518251 NFKBIEO00221 500 aa13.24□□□□□ -0.29
BRD9-216ENST00000518251 ZBTB7BO15156 539 aaPredicted RBP13.24□□□□□ -0.29
BRD9-216ENST00000518251 ZPR1O75312 459 aa13.24□□□□□ -0.29
BRD9-216ENST00000518251 LMNB1P20700 586 aa13.24□□□□□ -0.29
BRD9-216ENST00000518251 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
BRD9-216ENST00000518251 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
BRD9-216ENST00000518251 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
BRD9-216ENST00000518251 GLTPD2A6NH11 291 aa13.23□□□□□ -0.29
BRD9-216ENST00000518251 LRP10Q7Z4F1 713 aa13.23□□□□□ -0.29
BRD9-216ENST00000518251 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
BRD9-216ENST00000518251 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
BRD9-216ENST00000518251 PI4KAP2A4QPH2 592 aa13.22□□□□□ -0.29
BRD9-216ENST00000518251 CAPN15O75808 1086 aa13.22□□□□□ -0.29
BRD9-216ENST00000518251 STARD3NLO95772 234 aa13.22□□□□□ -0.29
BRD9-216ENST00000518251 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
BRD9-216ENST00000518251 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
BRD9-216ENST00000518251 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
BRD9-216ENST00000518251 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
BRD9-216ENST00000518251 PI4KAP1Q8N8J0 262 aa13.22□□□□□ -0.29
BRD9-216ENST00000518251 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
BRD9-216ENST00000518251 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 SERPINB2P05120 415 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
BRD9-216ENST00000518251 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
BRD9-216ENST00000518251 NBPF10Q6P3W6 841 aaKnown RBP13.21□□□□□ -0.29
BRD9-216ENST00000518251 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 NBPF15Q8N660 670 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 MAP3K2Q9Y2U5 619 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 PCDHB15Q9Y5E8 787 aa13.21□□□□□ -0.29
BRD9-216ENST00000518251 BCORQ6W2J9 1755 aa13.2□□□□□ -0.3
BRD9-216ENST00000518251 POTECB2RU33 542 aa13.2□□□□□ -0.3
BRD9-216ENST00000518251 A1BGP04217 495 aa13.2□□□□□ -0.3
BRD9-216ENST00000518251 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
BRD9-216ENST00000518251 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
BRD9-216ENST00000518251 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
BRD9-216ENST00000518251 TTLL6Q8N841 843 aa13.2□□□□□ -0.3
BRD9-216ENST00000518251 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
BRD9-216ENST00000518251 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
BRD9-216ENST00000518251 MEIS3Q99687 375 aa13.19□□□□□ -0.3
BRD9-216ENST00000518251 GNAI3P08754 354 aa13.18□□□□□ -0.3
BRD9-216ENST00000518251 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
BRD9-216ENST00000518251 RWDD1Q9H446 243 aaPredicted RBP13.18□□□□□ -0.3
BRD9-216ENST00000518251 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
BRD9-216ENST00000518251 FER1L6Q2WGJ9 1857 aa13.18□□□□□ -0.3
BRD9-216ENST00000518251 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
BRD9-216ENST00000518251 IGHDP01880 384 aa13.17□□□□□ -0.3
BRD9-216ENST00000518251 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
BRD9-216ENST00000518251 NEXNQ0ZGT2 675 aa13.17□□□□□ -0.3
BRD9-216ENST00000518251 HDAC1Q13547 482 aaPredicted RBP13.17□□□□□ -0.3
BRD9-216ENST00000518251 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
BRD9-216ENST00000518251 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
BRD9-216ENST00000518251 METTL22Q9BUU2 404 aaPredicted RBP13.17□□□□□ -0.3
BRD9-216ENST00000518251 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
BRD9-216ENST00000518251 H0YIN7 160 aa13.16□□□□□ -0.3
BRD9-216ENST00000518251 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
BRD9-216ENST00000518251 PRR5LQ6MZQ0 368 aa13.16□□□□□ -0.3
BRD9-216ENST00000518251 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
BRD9-216ENST00000518251 MYD88Q99836 296 aa13.16□□□□□ -0.3
BRD9-216ENST00000518251 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
BRD9-216ENST00000518251 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.3
BRD9-216ENST00000518251 GNAI2P04899 355 aa13.15□□□□□ -0.3
BRD9-216ENST00000518251 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
BRD9-216ENST00000518251 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
BRD9-216ENST00000518251 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
BRD9-216ENST00000518251 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
BRD9-216ENST00000518251 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
BRD9-216ENST00000518251 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
BRD9-216ENST00000518251 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.31
BRD9-216ENST00000518251 C21orf2O43822 256 aa13.14□□□□□ -0.31
BRD9-216ENST00000518251 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
BRD9-216ENST00000518251 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
BRD9-216ENST00000518251 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
BRD9-216ENST00000518251 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
BRD9-216ENST00000518251 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms