RNA–Protein interactions for RNA: ENST00000517015.1

SNORA48.11-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 89 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.11-201ENST00000517015 TNFRSF21O75509 655 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 STK10O94804 968 aaKnown RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 PTPN12Q05209 780 aaKnown RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 NNTQ13423 1086 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZNF280CQ8ND82 737 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 TTC16Q8NEE8 873 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 EMID1Q96A84 441 aaPredicted RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 CCDC74AQ96AQ1 378 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 ARMC5Q96C12 935 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 MRGPRX2Q96LB1 330 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZSCAN10Q96SZ4 725 aaPredicted RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 DNAJC25Q9H1X3 360 aa3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZNF395Q9H8N7 513 aaPredicted RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 DMGDHQ9UI17 866 aaKnown RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 V9GY48 417 aaPredicted RBP3.43□□□□□ -1.86
SNORA48.11-201ENST00000517015 TLDC2A0PJX2 215 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 TGFBR3LH3BV60 316 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 MICAL2O94851 1124 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 PTGIRP43119 386 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 GJA8P48165 433 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 RPIAP49247 311 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 IDH3AP50213 366 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 TMEM214Q6NUQ4 689 aaKnown RBP3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 NXPE4Q6UWF7 544 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 LIAT1Q6ZQX7 453 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 ERMP1Q7Z2K6 904 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZNF438Q7Z4V0 828 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 PPARGC1BQ86YN6 1023 aaKnown RBP3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 RHBDD1Q8TEB9 315 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 SNX29Q8TEQ0 813 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 TRIM52Q96A61 297 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 GPRASP2Q96D09 838 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 ITPKCQ96DU7 683 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 GPATCH3Q96I76 525 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 FRMD6Q96NE9 622 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 NLRP3Q96P20 1036 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 NIFKQ9BYG3 293 aaKnown RBP3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 ZFAND3Q9H8U3 227 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 CWC22Q9HCG8 908 aaKnown RBP3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 TMEM63CQ9P1W3 806 aa3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 MRPL42Q9Y6G3 142 aaKnown RBP3.42□□□□□ -1.86
SNORA48.11-201ENST00000517015 USP31Q70CQ4 1352 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 PHACTR2O75167 634 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 GADD45BO75293 160 aaPredicted RBP3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 ALDH1A1P00352 501 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 ATF4P18848 351 aaPredicted RBP3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 PHKA2P46019 1235 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 KCNC4Q03721 635 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 RBL2Q08999 1139 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 TCEAL1Q15170 157 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 TAF1CQ15572 869 aaPredicted RBP3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 C4orf17Q53FE4 359 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 C1orf53Q5VUE5 145 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 MPNDQ8N594 471 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 AIDAQ96BJ3 306 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 SUSD3Q96L08 255 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 TRIM56Q9BRZ2 755 aaKnown RBP3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 BCO2Q9BYV7 579 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 NEUROD4Q9HD90 331 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 KBTBD4Q9NVX7 518 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 FAM8A1Q9UBU6 413 aa3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 TTF2Q9UNY4 1162 aaKnown RBP3.41□□□□□ -1.86
SNORA48.11-201ENST00000517015 SBNO2Q9Y2G9 1366 aa3.4□□□□□ -1.86
SNORA48.11-201ENST00000517015 UBAP1LF5GYI3 381 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 K7ELQ4 463 aaPredicted RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 WNT7AO00755 349 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 EREGO14944 169 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 FBXO24O75426 580 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 ZIC2O95409 532 aaPredicted RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 NEFLP07196 543 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 GRNP28799 593 aaKnown RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 GGCXP38435 758 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 GRM2Q14416 872 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 GNASQ5JWF2 1037 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 EGFLAMQ63HQ2 1017 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 ZNF746Q6NUN9 644 aaPredicted RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 Q6ZVU0 165 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 VPS37DQ86XT2 251 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 CMTR1Q8N1G2 835 aaKnown RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 SPACA7Q96KW9 195 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 CHRDQ9H2X0 955 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 ZNF408Q9H9D4 720 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 ZFYVE28Q9HCC9 887 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 FAM13BQ9NYF5 915 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 RTCBQ9Y3I0 505 aaKnown RBP3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 MRVI1Q9Y6F6 885 aa3.4□□□□□ -1.87
SNORA48.11-201ENST00000517015 CD2BP2O95400 341 aaKnown RBP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 ITGBL1O95965 494 aaPredicted RBP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 SSBP05455 408 aaKnown RBP eCLIP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 ATP4AP20648 1035 aa3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 GTF2E1P29083 439 aaPredicted RBP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 INPP5BP32019 993 aa3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 NASPP49321 788 aaPredicted RBP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 ST13P50502 369 aaKnown RBP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 ARSDP51689 593 aa3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 WDR4P57081 412 aaKnown RBP3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 SERINC3Q13530 473 aa3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 MAP3K11Q16584 847 aa3.39□□□□□ -1.87
SNORA48.11-201ENST00000517015 NBPF1Q3BBV0 1214 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms