RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 WISP3O95389 354 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 VSIG8P0DPA2 414 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 IL2RBP14784 551 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TACR2P21452 398 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PRPH2P23942 346 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 IL4RP24394 825 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MT3P25713 68 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CNR2P34972 360 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CHRNA4P43681 627 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ARSDP51689 593 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CLCN6P51797 869 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PTPN5P54829 565 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KCNQ4P56696 695 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 FAM189BP81408 668 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MRPS21P82921 87 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 POU5F1Q01860 360 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PMS2P11Q13670 270 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ODF1Q14990 250 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRT31Q15323 416 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRTAP15-1Q3LI76 137 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SPATS1Q496A3 300 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PLK5Q496M5 336 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TTC19Q6DKK2 380 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KIAA1161Q6NSJ0 714 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 AEBP2Q6ZN18 517 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 GPRIN1Q7Z2K8 1008 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 RIC3Q7Z5B4 369 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CTU1Q7Z7A3 348 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CD163Q86VB7 1156 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRTAP11-1Q8IUC1 163 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 FOXP4Q8IVH2 680 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SCUBE3Q8IX30 993 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NPAS3Q8IXF0 933 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 BCL6BQ8N143 479 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ACBD4Q8NC06 268 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CXorf38Q8TB03 319 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 AENQ8WTP8 325 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SCARB1Q8WTV0 552 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 EZH1Q92800 747 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ZNF837Q96EG3 531 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DNAJA3Q96EY1 480 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 RADILQ96JH8 1075 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CDX2Q99626 313 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 GPR20Q99678 358 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 HNRNPABQ99729 332 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PTPRHQ9HD43 1115 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 KRT82Q9NSB4 513 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 RBM12Q9NTZ6 932 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 MRPS18AQ9NVS2 196 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 PEF1Q9UBV8 284 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 SERGEFQ9UGK8 458 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ZNF112Q9UJU3 913 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ZNF580Q9UK33 172 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 IKZF3Q9UKT9 509 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TLL2Q9Y6L7 1015 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DIDO1Q9BTC0 2240 aaKnown RBP-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 FAM186AA6NE01 2351 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 F8P00451 2351 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 TRRAPQ9Y4A5 3859 aa-0.4□□□□□ -2.47
SCARNA20.2-201ENST00000516052 VPS13BQ7Z7G8 4022 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ABCA12Q86UK0 2595 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DNAH1Q9P2D7 4330 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CSMD2Q7Z408 3487 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 NSD2O96028 1365 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 ATRNL1Q5VV63 1379 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 DCHS1Q96JQ0 3298 aa-0.41□□□□□ -2.47
SCARNA20.2-201ENST00000516052 CMYA5Q8N3K9 4069 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 IGKV6-21A0A0C4DH24 114 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 A0A0J9YXV3 536 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 HMX3A6NHT5 357 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SRRM3A6NNA2 597 aaPredicted RBP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PIK3R2O00459 728 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PITPNM1O00562 1244 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TRIM38O00635 465 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 WNT10BO00744 389 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 EPHB6O15197 1021 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 HOXA3O43365 443 aaPredicted RBP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 TADA3O75528 432 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CAPN15O75808 1086 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZFAND5O76080 213 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 RECQL4O94761 1208 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 NFATC1O95644 943 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRNPP04156 253 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 HRGP04196 525 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 MPOP05164 745 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 CFHP08603 1231 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PRKAR2AP13861 404 aaKnown RBP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 COL8A1P27658 744 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PTGDSP41222 190 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZC3H6P61129 1189 aaKnown RBP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 LSM11P83369 360 aaKnown RBP eCLIP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 EIF4EBP2Q13542 120 aaPredicted RBP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 NBPF1Q3BBV0 1214 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 NBPF9Q3BBW0 867 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 SLC44A4Q53GD3 710 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 VARS2Q5ST30 1063 aaKnown RBP-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 GPR157Q5UAW9 335 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 ZDHHC20Q5W0Z9 365 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 RHBDD2Q6NTF9 364 aa-0.41□□□□□ -2.48
SCARNA20.2-201ENST00000516052 PCSK4Q6UW60 755 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms