RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 ZBTB7BO15156 539 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-204ENST00000512707 GNAI2P04899 355 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 GCKRQ14397 625 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 HLFQ16534 295 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 ZNF827Q17R98 1081 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 USPL1Q5W0Q7 1092 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
PFDN1-204ENST00000512707 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-204ENST00000512707 UBR3Q6ZT12 1888 aa13.61□□□□□ -0.23
PFDN1-204ENST00000512707 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
PFDN1-204ENST00000512707 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
PFDN1-204ENST00000512707 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
PFDN1-204ENST00000512707 MEIS3Q99687 375 aa13.61□□□□□ -0.23
PFDN1-204ENST00000512707 ISCA1Q9BUE6 129 aa13.61□□□□□ -0.23
PFDN1-204ENST00000512707 ZBTB40Q9NUA8 1239 aa13.61□□□□□ -0.23
PFDN1-204ENST00000512707 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
PFDN1-204ENST00000512707 GPTP24298 496 aa13.6□□□□□ -0.23
PFDN1-204ENST00000512707 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
PFDN1-204ENST00000512707 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
PFDN1-204ENST00000512707 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
PFDN1-204ENST00000512707 USP44Q9H0E7 712 aa13.6□□□□□ -0.23
PFDN1-204ENST00000512707 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
PFDN1-204ENST00000512707 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
PFDN1-204ENST00000512707 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
PFDN1-204ENST00000512707 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
PFDN1-204ENST00000512707 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
PFDN1-204ENST00000512707 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
PFDN1-204ENST00000512707 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
PFDN1-204ENST00000512707 TRMT112Q9UI30 125 aaKnown RBP13.59□□□□□ -0.23
PFDN1-204ENST00000512707 UTYO14607 1347 aa13.59□□□□□ -0.23
PFDN1-204ENST00000512707 NPHP1O15259 732 aa13.58□□□□□ -0.24
PFDN1-204ENST00000512707 HMMRO75330 724 aa13.58□□□□□ -0.24
PFDN1-204ENST00000512707 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
PFDN1-204ENST00000512707 UBE3BQ7Z3V4 1068 aa13.58□□□□□ -0.24
PFDN1-204ENST00000512707 NLGN1Q8N2Q7 840 aa13.58□□□□□ -0.24
PFDN1-204ENST00000512707 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.24
PFDN1-204ENST00000512707 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
PFDN1-204ENST00000512707 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
PFDN1-204ENST00000512707 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.24
PFDN1-204ENST00000512707 NUP98P52948 1817 aa13.57□□□□□ -0.24
PFDN1-204ENST00000512707 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-204ENST00000512707 GTF2E1P29083 439 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-204ENST00000512707 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
PFDN1-204ENST00000512707 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
PFDN1-204ENST00000512707 AMIGO3Q86WK7 504 aa13.57□□□□□ -0.24
PFDN1-204ENST00000512707 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-204ENST00000512707 RPAP2Q8IXW5 612 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-204ENST00000512707 RWDD1Q9H446 243 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-204ENST00000512707 QSER1Q2KHR3 1735 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 H7C1W4 665 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 GYS1P13807 737 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
PFDN1-204ENST00000512707 LRRFIP2Q9Y608 721 aaKnown RBP13.56□□□□□ -0.24
PFDN1-204ENST00000512707 UBN2Q6ZU65 1347 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 CHD4Q14839 1912 aa13.56□□□□□ -0.24
PFDN1-204ENST00000512707 TPTE2Q6XPS3 522 aa13.55□□□□□ -0.24
PFDN1-204ENST00000512707 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
PFDN1-204ENST00000512707 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
PFDN1-204ENST00000512707 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
PFDN1-204ENST00000512707 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
PFDN1-204ENST00000512707 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
PFDN1-204ENST00000512707 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
PFDN1-204ENST00000512707 ANKRD44Q8N8A2 993 aa13.54□□□□□ -0.24
PFDN1-204ENST00000512707 SLC16A10Q8TF71 515 aa13.54□□□□□ -0.24
PFDN1-204ENST00000512707 FAM89AQ96GI7 184 aa13.54□□□□□ -0.24
PFDN1-204ENST00000512707 TUBGCP6Q96RT7 1819 aa13.54□□□□□ -0.24
PFDN1-204ENST00000512707 IRS4O14654 1257 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-204ENST00000512707 NFIXQ14938 502 aa13.53□□□□□ -0.24
PFDN1-204ENST00000512707 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
PFDN1-204ENST00000512707 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
PFDN1-204ENST00000512707 SUCLG2Q96I99 432 aa13.53□□□□□ -0.24
PFDN1-204ENST00000512707 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-204ENST00000512707 PCDHB15Q9Y5E8 787 aa13.53□□□□□ -0.24
PFDN1-204ENST00000512707 PDE8AO60658 829 aa13.52□□□□□ -0.25
PFDN1-204ENST00000512707 NTSR2O95665 410 aa13.52□□□□□ -0.25
PFDN1-204ENST00000512707 PTGER2P43116 358 aa13.52□□□□□ -0.25
PFDN1-204ENST00000512707 ST5P78524 1137 aa13.52□□□□□ -0.25
PFDN1-204ENST00000512707 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-204ENST00000512707 CENPQQ7L2Z9 268 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-204ENST00000512707 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
PFDN1-204ENST00000512707 PARP3Q9Y6F1 533 aa13.52□□□□□ -0.25
PFDN1-204ENST00000512707 COL24A1Q17RW2 1714 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 SRGAP3O43295 1099 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 ZBTB7AO95365 584 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 CASP7P55210 303 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 ATP8B2P98198 1209 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 MTX1Q13505 466 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
PFDN1-204ENST00000512707 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
PFDN1-204ENST00000512707 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
PFDN1-204ENST00000512707 SERPINB2P05120 415 aa13.5□□□□□ -0.25
PFDN1-204ENST00000512707 TM4SF1P30408 202 aa13.5□□□□□ -0.25
PFDN1-204ENST00000512707 CTSWP56202 376 aa13.5□□□□□ -0.25
PFDN1-204ENST00000512707 UTRNP46939 3433 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms