RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-215	ENST00000510241	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.99	■□□□□ 0.63
APBB3-215	ENST00000510241	ZNF215	Q9UL58	517 aa	Predicted RBP	18.99	■□□□□ 0.63
APBB3-215	ENST00000510241	ZSWIM6	Q9HCJ5	1215 aa		18.99	■□□□□ 0.63
APBB3-215	ENST00000510241	CTNNA3	Q9UI47	895 aa		18.99	■□□□□ 0.63
APBB3-215	ENST00000510241	SETD1B	Q9UPS6	1966 aa	Known RBP	18.99	■□□□□ 0.63
APBB3-215	ENST00000510241	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	DLC1	Q96QB1	1528 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	SSH2	Q76I76	1423 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	CCDC129	Q6ZRS4	1044 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	CCDC112	Q8NEF3	446 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	LEO1	Q8WVC0	666 aa	Predicted RBP	18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	DIP2C	Q9Y2E4	1556 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	VPS53	Q5VIR6	699 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	LRRN4CL	Q8ND94	238 aa		18.98	■□□□□ 0.63
APBB3-215	ENST00000510241	POLA2	Q14181	598 aa		18.97	■□□□□ 0.63
APBB3-215	ENST00000510241	NECTIN1	Q15223	517 aa		18.97	■□□□□ 0.63
APBB3-215	ENST00000510241	CLASRP	Q8N2M8	674 aa	Known RBP	18.97	■□□□□ 0.63
APBB3-215	ENST00000510241	GTPBP4	Q9BZE4	634 aa	Known RBP	18.97	■□□□□ 0.63
APBB3-215	ENST00000510241	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.97	■□□□□ 0.63
APBB3-215	ENST00000510241	SLC27A2	O14975	620 aa		18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	ZKSCAN1	P17029	563 aa	Predicted RBP	18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	SEC62	Q99442	399 aa	Known RBP	18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	CCDC171	Q6TFL3	1326 aa		18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	GLRX3	O76003	335 aa	Known RBP	18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	PIP4K2A	P48426	406 aa	Predicted RBP	18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	ELF2	Q15723	593 aa		18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	DNAAF4	Q8WXU2	420 aa		18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	EAF2	Q96CJ1	260 aa	Predicted RBP	18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	FMNL2	Q96PY5	1086 aa		18.96	■□□□□ 0.63
APBB3-215	ENST00000510241	MPRIP	Q6WCQ1	1025 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	ECHDC1	Q9NTX5	307 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	PREX1	Q8TCU6	1659 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	PEAK1	Q9H792	1746 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	KMT5B	Q4FZB7	885 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	BEND3	Q5T5X7	828 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	CEP135	Q66GS9	1140 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	FSD1	Q9BTV5	496 aa		18.95	■□□□□ 0.62
APBB3-215	ENST00000510241	HSP90B1	P14625	803 aa	Known RBP	18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	TOB2	Q14106	344 aa	Predicted RBP	18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	ISM2	Q6H9L7	571 aa		18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	BRF1	Q92994	677 aa		18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	BLOC1S2	Q6QNY1	142 aa		18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	CHST3	Q7LGC8	479 aa		18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	A2ML1	A8K2U0	1454 aa		18.94	■□□□□ 0.62
APBB3-215	ENST00000510241	GORAB	Q5T7V8	394 aa		18.93	■□□□□ 0.62
APBB3-215	ENST00000510241		A0A0G2JLW4	131 aa		18.93	■□□□□ 0.62
APBB3-215	ENST00000510241	MAP3K2	Q9Y2U5	619 aa		18.93	■□□□□ 0.62
APBB3-215	ENST00000510241	SKIL	P12757	684 aa		18.92	■□□□□ 0.62
APBB3-215	ENST00000510241	PLA2G4D	Q86XP0	818 aa		18.92	■□□□□ 0.62
APBB3-215	ENST00000510241	BBX	Q8WY36	941 aa	Predicted RBP	18.92	■□□□□ 0.62
APBB3-215	ENST00000510241	CCT2	P78371	535 aa	Known RBP	18.92	■□□□□ 0.62
APBB3-215	ENST00000510241	SMTNL1	A8MU46	457 aa		18.92	■□□□□ 0.62
APBB3-215	ENST00000510241	IL17RA	Q96F46	866 aa		18.92	■□□□□ 0.62
APBB3-215	ENST00000510241	FBXO38	Q6PIJ6	1188 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	RAB11FIP4	Q86YS3	637 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	RUFY2	Q8WXA3	655 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	OGFR	Q9NZT2	677 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	TUBGCP6	Q96RT7	1819 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241		H3BQV1	296 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	SASH1	O94885	1247 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	IFFO2	Q5TF58	517 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	GOLPH3L	Q9H4A5	285 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	CLSTN2	Q9H4D0	955 aa		18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	NCOA5	Q9HCD5	579 aa	Known RBP	18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.91	■□□□□ 0.62
APBB3-215	ENST00000510241	BIN1	O00499	593 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	LRRC8A	Q8IWT6	810 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	KIF18A	Q8NI77	898 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	GOLGA6L19	H0YKK7	550 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	SLFN14	P0C7P3	912 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	OTUD7B	Q6GQQ9	843 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	GTF3C6	Q969F1	213 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	LRRC59	Q96AG4	307 aa	Known RBP	18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	TMX1	Q9H3N1	280 aa		18.9	■□□□□ 0.62
APBB3-215	ENST00000510241	KIF20A	O95235	890 aa		18.89	■□□□□ 0.61
APBB3-215	ENST00000510241	FGD1	P98174	961 aa		18.89	■□□□□ 0.61
APBB3-215	ENST00000510241	DDX41	Q9UJV9	622 aa	Known RBP	18.89	■□□□□ 0.61
APBB3-215	ENST00000510241	CCDC69	A6NI79	296 aa		18.89	■□□□□ 0.61
APBB3-215	ENST00000510241	CYB5RL	Q6IPT4	315 aa		18.89	■□□□□ 0.61
APBB3-215	ENST00000510241	MAP4K1	Q92918	833 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	AOX1	Q06278	1338 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	TTC21A	Q8NDW8	1320 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	BECN2	A8MW95	431 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	GOLGA8F	Q08AF8	430 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	GOLGA8DP	Q0D2H9	430 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	SUCLG2	Q96I99	432 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	DNAJC2	Q99543	621 aa	Known RBP	18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	EPC1	Q9H2F5	836 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	BICC1	Q9H694	974 aa	Known RBP	18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	IGSF1	Q8N6C5	1336 aa		18.88	■□□□□ 0.61
APBB3-215	ENST00000510241	OVOS2	A0A0J9YW53	1432 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	LTK	P29376	864 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	PTPN14	Q15678	1187 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	ERCC6L	Q2NKX8	1250 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	OVOS2	Q6IE36	1432 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	RPS6KB1	P23443	525 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	HOXC9	P31274	260 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241		Q6ZUG5	572 aa		18.87	■□□□□ 0.61
APBB3-215	ENST00000510241	CCAR1	Q8IX12	1150 aa	Known RBP	18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms