RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	INPP5B	P32019	993 aa		5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ARSD	P51689	593 aa		5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	FMR1	Q06787	632 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	COL19A1	Q14993	1142 aa		5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	CMTR1	Q8N1G2	835 aa	Known RBP	5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	CEP63	Q96MT8	703 aa		5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	DYRK1B	Q9Y463	629 aa		5.2	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	SENP3-EIF4A1	A0A087X0R7	540 aa		5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	RPLP1	P05386	114 aa	Known RBP	5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	LDHB	P07195	334 aa	Known RBP	5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	LAPTM4A	Q15012	233 aa		5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	RIPOR1	Q6ZS17	1223 aa		5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ALKBH8	Q96BT7	664 aa	Known RBP	5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	CRISPLD1	Q9H336	500 aa		5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	RTCB	Q9Y3I0	505 aa	Known RBP	5.19	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	PNMA6F	A0A0J9YX94	578 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	UBAP1L	F5GYI3	381 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	TYRO3	Q06418	890 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ORC1	Q13415	861 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	EFHC2	Q5JST6	749 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	SETDB2	Q96T68	719 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	WWC3	Q9ULE0	1092 aa		5.18	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	EPB42	P16452	691 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ATP2B2	Q01814	1243 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	PTS	Q03393	145 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	TRIP4	Q15650	581 aa	Predicted RBP	5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ENOX2	Q16206	610 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ZNF438	Q7Z4V0	828 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	NLRP8	Q86W28	1048 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	CSRNP1	Q96S65	589 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	DUSP9	Q99956	384 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	BCL11A	Q9H165	835 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	BRD7	Q9NPI1	651 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	KCNMB2	Q9Y691	235 aa		5.17	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	SLC35F4	A4IF30	521 aa		5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	ATXN7	O15265	892 aa	Predicted RBP	5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	XYLB	O75191	536 aa		5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	PRPF40A	O75400	957 aa	Known RBP	5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	GRN	P28799	593 aa	Known RBP	5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	XPC	Q01831	940 aa	Predicted RBP	5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	FAM161B	Q96MY7	647 aa		5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	SENP2	Q9HC62	589 aa		5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	RNF19A	Q9NV58	838 aa		5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.16	□□□□□ -1.58
CALCOCO2-216	ENST00000509784	EIF1AY	O14602	144 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	KHNYN	O15037	678 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	TNFRSF21	O75509	655 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	NEFL	P07196	543 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	FGD1	P98174	961 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	SAMD5	Q5TGI4	173 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	FIGNL1	Q6PIW4	674 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	CCDC155	Q8N6L0	562 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	KIFC2	Q96AC6	838 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	IRX2	Q9BZI1	471 aa	Predicted RBP	5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	NUCKS1	Q9H1E3	243 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	ELP3	Q9H9T3	547 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	TMEM63C	Q9P1W3	806 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	GMPR2	Q9P2T1	348 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	PARP2	Q9UGN5	583 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	KCNH4	Q9UQ05	1017 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	PCDHGC4	Q9Y5F7	938 aa		5.15	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	DCDC2B	A2VCK2	349 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	CPNE3	O75131	537 aa	Known RBP	5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	THBS1	P07996	1170 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	SFSWAP	Q12872	951 aa	Known RBP	5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	PSMD2	Q13200	908 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	LBR	Q14739	615 aa	Known RBP	5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	DBN1	Q16643	649 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	USPL1	Q5W0Q7	1092 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	ALG1L	Q6GMV1	187 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	PDE12	Q6L8Q7	609 aa	Known RBP	5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	XKR5	Q6UX68	686 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	KRT25	Q7Z3Z0	450 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	MRS2	Q9HD23	443 aa		5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.14	□□□□□ -1.59
CALCOCO2-216	ENST00000509784		H7C1W4	665 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	PHACTR2	O75167	634 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	SASH3	O75995	380 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	FAM157B	P0CG42	384 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	SNRPB	P14678	240 aa	Known RBP	5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	TSNAXIP1	Q2TAA8	658 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	TRIM22	Q8IYM9	498 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	SNX29	Q8TEQ0	813 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	TRIM47	Q96LD4	638 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	CFHR5	Q9BXR6	569 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	DNAJC25	Q9H1X3	360 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	ZFYVE28	Q9HCC9	887 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	STRN4	Q9NRL3	753 aa		5.13	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	EFS	O43281	561 aa		5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	BNIP3L	O60238	219 aa		5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	EGFR	P00533	1210 aa		5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	POLR3D	P05423	398 aa	Predicted RBP	5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	MAPT	P10636	758 aa	Known RBP	5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	VAMP1	P23763	118 aa		5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	TARS	P26639	723 aa	Known RBP	5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	KCNQ4	P56696	695 aa		5.12	□□□□□ -1.59
CALCOCO2-216	ENST00000509784	DAB2	P98082	770 aa		5.12	□□□□□ -1.59

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