RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 A0A0G2JS52 829 aa13.58□□□□□ -0.24
COPS4-206ENST00000509093 PNMA6EA0A0J9YXQ4 647 aa13.58□□□□□ -0.24
COPS4-206ENST00000509093 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
COPS4-206ENST00000509093 TBC1D9Q6ZT07 1266 aa13.58□□□□□ -0.24
COPS4-206ENST00000509093 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
COPS4-206ENST00000509093 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
COPS4-206ENST00000509093 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
COPS4-206ENST00000509093 LAMB4A4D0S4 1761 aa13.57□□□□□ -0.24
COPS4-206ENST00000509093 APBB1O00213 710 aa13.57□□□□□ -0.24
COPS4-206ENST00000509093 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
COPS4-206ENST00000509093 IGKV5-2P06315 115 aa13.57□□□□□ -0.24
COPS4-206ENST00000509093 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
COPS4-206ENST00000509093 KAT6BQ8WYB5 2073 aa13.57□□□□□ -0.24
COPS4-206ENST00000509093 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 RABEP1Q15276 862 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 TTLL7Q6ZT98 887 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 ANKRD13DQ6ZTN6 518 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 MYD88Q99836 296 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 PRDM10Q9NQV6 1147 aa13.56□□□□□ -0.24
COPS4-206ENST00000509093 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
COPS4-206ENST00000509093 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
COPS4-206ENST00000509093 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
COPS4-206ENST00000509093 LINS1Q8NG48 757 aa13.55□□□□□ -0.24
COPS4-206ENST00000509093 ARID3AQ99856 593 aa13.55□□□□□ -0.24
COPS4-206ENST00000509093 KCNQ2O43526 872 aa13.55□□□□□ -0.24
COPS4-206ENST00000509093 ZSCAN20P17040 1043 aaPredicted RBP13.55□□□□□ -0.24
COPS4-206ENST00000509093 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
COPS4-206ENST00000509093 MYRIPQ8NFW9 859 aa13.55□□□□□ -0.24
COPS4-206ENST00000509093 METTL22Q9BUU2 404 aaPredicted RBP13.55□□□□□ -0.24
COPS4-206ENST00000509093 AFF2P51816 1311 aa13.54□□□□□ -0.24
COPS4-206ENST00000509093 CDC45O75419 566 aa13.54□□□□□ -0.24
COPS4-206ENST00000509093 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
COPS4-206ENST00000509093 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 ATP5J2-PTCD1G3V325 749 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 KIAA2012Q0VF49 1180 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 CWC22Q9HCG8 908 aaKnown RBP13.53□□□□□ -0.24
COPS4-206ENST00000509093 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
COPS4-206ENST00000509093 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 HMMRO75330 724 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 FAM182BQ5T319 152 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
COPS4-206ENST00000509093 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
COPS4-206ENST00000509093 PTF1AQ7RTS3 328 aa13.52□□□□□ -0.24
COPS4-206ENST00000509093 PLBD2Q8NHP8 589 aa13.52□□□□□ -0.24
COPS4-206ENST00000509093 KAZALD1Q96I82 304 aa13.52□□□□□ -0.24
COPS4-206ENST00000509093 GTPBP4Q9BZE4 634 aaKnown RBP13.52□□□□□ -0.24
COPS4-206ENST00000509093 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.24
COPS4-206ENST00000509093 RBM27Q9P2N5 1060 aaKnown RBP13.52□□□□□ -0.24
COPS4-206ENST00000509093 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.24
COPS4-206ENST00000509093 GRM8O00222 908 aa13.52□□□□□ -0.25
COPS4-206ENST00000509093 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
COPS4-206ENST00000509093 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.25
COPS4-206ENST00000509093 CYP19A1P11511 503 aaPredicted RBP13.51□□□□□ -0.25
COPS4-206ENST00000509093 GCKRQ14397 625 aa13.51□□□□□ -0.25
COPS4-206ENST00000509093 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
COPS4-206ENST00000509093 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
COPS4-206ENST00000509093 FGD1P98174 961 aa13.51□□□□□ -0.25
COPS4-206ENST00000509093 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
COPS4-206ENST00000509093 POLA2Q14181 598 aa13.51□□□□□ -0.25
COPS4-206ENST00000509093 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
COPS4-206ENST00000509093 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
COPS4-206ENST00000509093 AK9Q5TCS8 1911 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 UTYO14607 1347 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 KIF20AO95235 890 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
COPS4-206ENST00000509093 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
COPS4-206ENST00000509093 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 SYCE3A1L190 88 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 STARD3NLO95772 234 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 MBD3O95983 291 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 PLEKHM2Q8IWE5 1019 aa13.5□□□□□ -0.25
COPS4-206ENST00000509093 ARFGEF2Q9Y6D5 1785 aa13.49□□□□□ -0.25
COPS4-206ENST00000509093 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.49□□□□□ -0.25
COPS4-206ENST00000509093 PKP1Q13835 747 aa13.49□□□□□ -0.25
COPS4-206ENST00000509093 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
COPS4-206ENST00000509093 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
COPS4-206ENST00000509093 ZBTB1Q9Y2K1 713 aa13.49□□□□□ -0.25
COPS4-206ENST00000509093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
COPS4-206ENST00000509093 PTMAP06454 111 aaKnown RBP13.48□□□□□ -0.25
COPS4-206ENST00000509093 ZNF710Q8N1W2 664 aa13.48□□□□□ -0.25
COPS4-206ENST00000509093 TJP1Q07157 1748 aa13.48□□□□□ -0.25
COPS4-206ENST00000509093 ITPK1Q13572 414 aa13.48□□□□□ -0.25
COPS4-206ENST00000509093 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
COPS4-206ENST00000509093 SIK1P57059 783 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 PALLDQ8WX93 1383 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 ATRNO75882 1429 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 SURF6O75683 361 aaKnown RBP13.47□□□□□ -0.25
COPS4-206ENST00000509093 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 KCNQ4P56696 695 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
COPS4-206ENST00000509093 NUP188Q5SRE5 1749 aa13.47□□□□□ -0.25
COPS4-206ENST00000509093 A0A087WZG4 1122 aa13.46□□□□□ -0.25
COPS4-206ENST00000509093 MTX1Q13505 466 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms