RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ELP1O95163 1332 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 TACC1O75410 805 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 OAS2P29728 719 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 TMEM132EQ6IEE7 984 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 SPATS2Q86XZ4 545 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 GOLGA5Q8TBA6 731 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 UBAC1Q9BSL1 405 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 LMBRD1Q9NUN5 540 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 ATP8B1O43520 1251 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 KRT86O43790 486 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 NUP133Q8WUM0 1156 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 N4BP3O15049 544 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 PPP1R12BO60237 982 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 ATP2C2O75185 946 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 STAMBPO95630 424 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 ZNF75DP51815 510 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 LACTBP83111 547 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 RMND1Q9NWS8 449 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 VAV2P52735 878 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 LMNTD2Q8IXW0 634 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 KLHL34Q8N239 644 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 RBM42Q9BTD8 480 aaKnown RBP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 ECHDC1Q9NTX5 307 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 TDRD12Q587J7 1177 aaKnown RBP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 NEK1Q96PY6 1258 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 TROQ12816 1431 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 CAMSAP2Q08AD1 1489 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 KIF4AO95239 1232 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 BRD3Q15059 726 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 CPLX4Q7Z7G2 160 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 RAPGEF4Q8WZA2 1011 aa8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 SEPT11Q9NVA2 429 aaKnown RBP8.37□□□□□ -1.07
UBE2D3-224ENST00000508474 GSTTP1A0A1W2PQM5 241 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 GPR161Q8N6U8 529 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 IFT74Q96LB3 600 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 RTL1A6NKG5 1358 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 ANKRD36BQ8N2N9 1353 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 NDUFAB1O14561 156 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 PHACTR2O75167 634 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 PDE1AP54750 535 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 DAAM2Q86T65 1068 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 ZGPATQ8N5A5 531 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 ANKRD44Q8N8A2 993 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 SAMD15Q9P1V8 674 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 BMP15O95972 392 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 SELENOOQ9BVL4 669 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 SWAP70Q9UH65 585 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 TMCO5BA8MYB1 307 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 MATR3P43243 847 aaKnown RBP eCLIP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 GUCY1B3Q02153 619 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 SSRP1Q08945 709 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 IFNKQ9P0W0 207 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 SPG7Q9UQ90 795 aa8.36□□□□□ -1.07
UBE2D3-224ENST00000508474 RAD21O60216 631 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 SH3BGRP55822 239 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 ZNF569Q5MCW4 686 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 CFAP58Q5T655 872 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 LRCH2Q5VUJ6 765 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 CTDP1Q9Y5B0 961 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 FYB1O15117 783 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 ZEB2O60315 1214 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 RHOXF2BP0C7M4 288 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 CNGA4Q8IV77 575 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 BAG1Q99933 345 aaPredicted RBP8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 RHOXF2Q9BQY4 288 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 PUF60Q9UHX1 559 aaKnown RBP8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 ARHGAP5Q13017 1502 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 ASXL1Q8IXJ9 1541 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 GOLGA6CA6NDK9 693 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 GOLGA6DP0CG33 693 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 PPFIBP2Q8ND30 876 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 GOLGA6AQ9NYA3 693 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 CEP126Q9P2H0 1117 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 RASAL2Q9UJF2 1139 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 RAD50Q92878 1312 aa8.35□□□□□ -1.07
UBE2D3-224ENST00000508474 GOLGA8BA8MQT2 603 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 AKR1B10O60218 316 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 AMPD3Q01432 767 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 SCAF11Q99590 1463 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 MYO1BO43795 1136 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 ATP11AP98196 1134 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 KIF5AQ12840 1032 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 SEPT6Q14141 434 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 DDX46Q7L014 1031 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 UTP14AQ9BVJ6 771 aaKnown RBP8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 CLSTN2Q9H4D0 955 aa8.34□□□□□ -1.07
UBE2D3-224ENST00000508474 ORC3Q9UBD5 711 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms