RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 RPGRQ92834 1020 aaKnown RBP30.45■■■□□ 2.47
CALCOCO2-209ENST00000507076 TMEM88BA6NKF7 163 aa30.44■■■□□ 2.46
CALCOCO2-209ENST00000507076 SLC51AQ86UW1 340 aa30.44■■■□□ 2.46
CALCOCO2-209ENST00000507076 PSMD1Q99460 953 aa30.44■■■□□ 2.46
CALCOCO2-209ENST00000507076 RIC1Q4ADV7 1423 aa30.44■■■□□ 2.46
CALCOCO2-209ENST00000507076 IBTKQ9P2D0 1353 aaPredicted RBP30.43■■■□□ 2.46
CALCOCO2-209ENST00000507076 SUSD4Q5VX71 490 aa30.43■■■□□ 2.46
CALCOCO2-209ENST00000507076 GPC2Q8N158 579 aa30.43■■■□□ 2.46
CALCOCO2-209ENST00000507076 JDP2Q8WYK2 163 aa30.43■■■□□ 2.46
CALCOCO2-209ENST00000507076 ANKRD36CQ5JPF3 1778 aa30.42■■■□□ 2.46
CALCOCO2-209ENST00000507076 FOXN1O15353 648 aa30.42■■■□□ 2.46
CALCOCO2-209ENST00000507076 MAP1SQ66K74 1059 aaPredicted RBP30.42■■■□□ 2.46
CALCOCO2-209ENST00000507076 LAMB2P55268 1798 aa30.41■■■□□ 2.46
CALCOCO2-209ENST00000507076 VEGFBP49765 207 aa30.41■■■□□ 2.46
CALCOCO2-209ENST00000507076 PNMA8AQ86V59 439 aaPredicted RBP30.41■■■□□ 2.46
CALCOCO2-209ENST00000507076 GJA3Q9Y6H8 435 aa30.41■■■□□ 2.46
CALCOCO2-209ENST00000507076 MAPK8IP3Q9UPT6 1336 aa30.41■■■□□ 2.46
CALCOCO2-209ENST00000507076 TCERG1O14776 1098 aaKnown RBP30.39■■■□□ 2.46
CALCOCO2-209ENST00000507076 HOXA10P31260 410 aaPredicted RBP30.39■■■□□ 2.46
CALCOCO2-209ENST00000507076 CC2D2BQ6DHV5 1058 aa30.39■■■□□ 2.46
CALCOCO2-209ENST00000507076 CNTROBQ8N137 903 aa30.39■■■□□ 2.46
CALCOCO2-209ENST00000507076 NTSR2O95665 410 aa30.38■■■□□ 2.45
CALCOCO2-209ENST00000507076 EIF6P56537 245 aaKnown RBP30.38■■■□□ 2.45
CALCOCO2-209ENST00000507076 C3orf67Q6ZVT6 689 aa30.38■■■□□ 2.45
CALCOCO2-209ENST00000507076 ZNF34Q8IZ26 560 aa30.38■■■□□ 2.45
CALCOCO2-209ENST00000507076 PPEF1O14829 653 aaPredicted RBP30.37■■■□□ 2.45
CALCOCO2-209ENST00000507076 RBM17Q96I25 401 aaKnown RBP30.37■■■□□ 2.45
CALCOCO2-209ENST00000507076 TRPM7Q96QT4 1865 aa30.37■■■□□ 2.45
CALCOCO2-209ENST00000507076 GIGYF2Q6Y7W6 1299 aaKnown RBP30.36■■■□□ 2.45
CALCOCO2-209ENST00000507076 LARGE2Q8N3Y3 721 aa30.36■■■□□ 2.45
CALCOCO2-209ENST00000507076 AIDAQ96BJ3 306 aa30.35■■■□□ 2.45
CALCOCO2-209ENST00000507076 CRAMP1Q96RY5 1269 aa30.35■■■□□ 2.45
CALCOCO2-209ENST00000507076 TSPYL4Q9UJ04 414 aa30.35■■■□□ 2.45
CALCOCO2-209ENST00000507076 ERBB4Q15303 1308 aa30.35■■■□□ 2.45
CALCOCO2-209ENST00000507076 LMOD1P29536 600 aaPredicted RBP30.34■■■□□ 2.45
CALCOCO2-209ENST00000507076 PNNQ9H307 717 aaKnown RBP30.33■■■□□ 2.45
CALCOCO2-209ENST00000507076 TAF1P21675 1872 aa30.32■■■□□ 2.44
CALCOCO2-209ENST00000507076 EIF2S2P20042 333 aaKnown RBP30.32■■■□□ 2.44
CALCOCO2-209ENST00000507076 PPP1R42Q7Z4L9 355 aa30.32■■■□□ 2.44
CALCOCO2-209ENST00000507076 RASSF10A6NK89 507 aa30.31■■■□□ 2.44
CALCOCO2-209ENST00000507076 ANXA1P04083 346 aa30.31■■■□□ 2.44
CALCOCO2-209ENST00000507076 SCNN1DP51172 638 aa30.31■■■□□ 2.44
CALCOCO2-209ENST00000507076 GRIPAP1Q4V328 841 aa30.31■■■□□ 2.44
CALCOCO2-209ENST00000507076 EPS15P42566 896 aa30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 CTCFP49711 727 aaPredicted RBP30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 PROSER3Q2NL68 480 aa30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 DEFB115Q30KQ5 88 aa30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 PARP10Q53GL7 1025 aa30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 LRP10Q7Z4F1 713 aa30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 PRDM10Q9NQV6 1147 aa30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 ABT1Q9ULW3 272 aaKnown RBP30.3■■■□□ 2.44
CALCOCO2-209ENST00000507076 PDIA6Q15084 440 aa30.29■■■□□ 2.44
CALCOCO2-209ENST00000507076 NIM1KQ8IY84 436 aa30.29■■■□□ 2.44
CALCOCO2-209ENST00000507076 NLRP3Q96P20 1036 aa30.29■■■□□ 2.44
CALCOCO2-209ENST00000507076 PPIP5K2O43314 1243 aa30.28■■■□□ 2.44
CALCOCO2-209ENST00000507076 FMR1Q06787 632 aaKnown RBP eCLIP30.28■■■□□ 2.44
CALCOCO2-209ENST00000507076 WBP1LQ9NX94 342 aa30.28■■■□□ 2.44
CALCOCO2-209ENST00000507076 RIPK4P57078 832 aa30.27■■■□□ 2.44
CALCOCO2-209ENST00000507076 AOC3Q16853 763 aa30.27■■■□□ 2.44
CALCOCO2-209ENST00000507076 UTP14AQ9BVJ6 771 aaKnown RBP30.27■■■□□ 2.44
CALCOCO2-209ENST00000507076 DDX21Q9NR30 783 aaKnown RBP eCLIP30.27■■■□□ 2.44
CALCOCO2-209ENST00000507076 NECTIN2Q92692 538 aa30.26■■■□□ 2.43
CALCOCO2-209ENST00000507076 THSD7BQ9C0I4 1608 aa30.25■■■□□ 2.43
CALCOCO2-209ENST00000507076 ABCC4O15439 1325 aa30.25■■■□□ 2.43
CALCOCO2-209ENST00000507076 WDR33Q9C0J8 1336 aaKnown RBP30.25■■■□□ 2.43
CALCOCO2-209ENST00000507076 LBX1P52954 281 aa30.25■■■□□ 2.43
CALCOCO2-209ENST00000507076 TMX4Q9H1E5 349 aaPredicted RBP30.25■■■□□ 2.43
CALCOCO2-209ENST00000507076 ATP6V0A2Q9Y487 856 aa30.25■■■□□ 2.43
CALCOCO2-209ENST00000507076 SLC10A5Q5PT55 438 aa30.23■■■□□ 2.43
CALCOCO2-209ENST00000507076 AIMP1Q12904 312 aaKnown RBP30.22■■■□□ 2.43
CALCOCO2-209ENST00000507076 DDX60Q8IY21 1712 aaKnown RBP30.22■■■□□ 2.43
CALCOCO2-209ENST00000507076 TRAF5O00463 557 aa30.21■■■□□ 2.43
CALCOCO2-209ENST00000507076 PAXIP1Q6ZW49 1069 aaPredicted RBP30.21■■■□□ 2.43
CALCOCO2-209ENST00000507076 USP50Q70EL3 339 aaPredicted RBP30.21■■■□□ 2.43
CALCOCO2-209ENST00000507076 HCLS1P14317 486 aaPredicted RBP30.2■■■□□ 2.43
CALCOCO2-209ENST00000507076 COPS6Q7L5N1 327 aa30.2■■■□□ 2.43
CALCOCO2-209ENST00000507076 XAGE3Q8WTP9 111 aa30.2■■■□□ 2.43
CALCOCO2-209ENST00000507076 HSPA8P11142 646 aaKnown RBP30.19■■■□□ 2.42
CALCOCO2-209ENST00000507076 TMPOP42166 694 aaKnown RBP30.19■■■□□ 2.42
CALCOCO2-209ENST00000507076 NLRP10Q86W26 655 aa30.19■■■□□ 2.42
CALCOCO2-209ENST00000507076 GPRC5DQ9NZD1 345 aa30.19■■■□□ 2.42
CALCOCO2-209ENST00000507076 CXCL9Q07325 125 aa30.18■■■□□ 2.42
CALCOCO2-209ENST00000507076 GRM1Q13255 1194 aa30.18■■■□□ 2.42
CALCOCO2-209ENST00000507076 SUPT20HQ8NEM7 779 aa30.18■■■□□ 2.42
CALCOCO2-209ENST00000507076 ZNF428Q96B54 188 aa30.18■■■□□ 2.42
CALCOCO2-209ENST00000507076 BABAM1Q9NWV8 329 aa30.18■■■□□ 2.42
CALCOCO2-209ENST00000507076 LRRC37AA6NMS7 1700 aa30.18■■■□□ 2.42
CALCOCO2-209ENST00000507076 MAP2K1Q02750 393 aaPredicted RBP30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 LMOD3Q0VAK6 560 aa30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 KRT24Q2M2I5 525 aa30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 HSP90AB3PQ58FF7 597 aa30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 DPP8Q6V1X1 898 aaPredicted RBP30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 CAPNS2Q96L46 248 aa30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 VPS33BQ9H267 617 aa30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 ZNRF3Q9ULT6 936 aa30.17■■■□□ 2.42
CALCOCO2-209ENST00000507076 RTFDC1Q9BY42 306 aaPredicted RBP30.16■■■□□ 2.42
CALCOCO2-209ENST00000507076 ADARB2Q9NS39 739 aaKnown RBP30.16■■■□□ 2.42
CALCOCO2-209ENST00000507076 DUOX1Q9NRD9 1551 aa30.15■■■□□ 2.42
CALCOCO2-209ENST00000507076 GMPSP49915 693 aaPredicted RBP30.15■■■□□ 2.42
CALCOCO2-209ENST00000507076 NEUROD2Q15784 382 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms