RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SRGNP10124 158 aa8.28□□□□□ -1.08
GYPB-204ENST00000504951 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
GYPB-204ENST00000504951 MASTLQ96GX5 879 aa8.28□□□□□ -1.08
GYPB-204ENST00000504951 HHIPL1Q96JK4 782 aa8.28□□□□□ -1.08
GYPB-204ENST00000504951 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
GYPB-204ENST00000504951 THSD7BQ9C0I4 1608 aa8.28□□□□□ -1.08
GYPB-204ENST00000504951 STARD3NLO95772 234 aa8.27□□□□□ -1.09
GYPB-204ENST00000504951 EPHX2P34913 555 aa8.27□□□□□ -1.09
GYPB-204ENST00000504951 PRR5LQ6MZQ0 368 aa8.27□□□□□ -1.09
GYPB-204ENST00000504951 IFNLR1Q8IU57 520 aaPredicted RBP8.27□□□□□ -1.09
GYPB-204ENST00000504951 ZNF622Q969S3 477 aaKnown RBP eCLIP8.27□□□□□ -1.09
GYPB-204ENST00000504951 HS3ST6Q96QI5 342 aa8.27□□□□□ -1.09
GYPB-204ENST00000504951 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
GYPB-204ENST00000504951 DDX21Q9NR30 783 aaKnown RBP eCLIP8.27□□□□□ -1.09
GYPB-204ENST00000504951 ZBTB1Q9Y2K1 713 aa8.27□□□□□ -1.09
GYPB-204ENST00000504951 CARMIL3Q8ND23 1372 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 CCDC85CA6NKD9 419 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 IL6STP40189 918 aaPredicted RBP8.26□□□□□ -1.09
GYPB-204ENST00000504951 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 CLEC4GQ6UXB4 293 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 RTKN2Q8IZC4 609 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 GPC2Q8N158 579 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 GPR101Q96P66 508 aaPredicted RBP8.26□□□□□ -1.09
GYPB-204ENST00000504951 PDE4DIPQ5VU43 2346 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 MRC1P22897 1456 aa8.26□□□□□ -1.09
GYPB-204ENST00000504951 SCN11AQ9UI33 1791 aa8.25□□□□□ -1.09
GYPB-204ENST00000504951 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
GYPB-204ENST00000504951 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
GYPB-204ENST00000504951 CCDC93Q567U6 631 aa8.25□□□□□ -1.09
GYPB-204ENST00000504951 TBC1D9BQ66K14 1250 aa8.25□□□□□ -1.09
GYPB-204ENST00000504951 PRPF40BQ6NWY9 871 aaKnown RBP8.25□□□□□ -1.09
GYPB-204ENST00000504951 ANKRD31Q8N7Z5 1873 aa8.25□□□□□ -1.09
GYPB-204ENST00000504951 RNMTO43148 476 aaKnown RBP8.24□□□□□ -1.09
GYPB-204ENST00000504951 NPR1P16066 1061 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 DOK7Q18PE1 504 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 CAPNS2Q96L46 248 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 PSMD1Q99460 953 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 ARFGEF2Q9Y6D5 1785 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 SLX4Q8IY92 1834 aa8.24□□□□□ -1.09
GYPB-204ENST00000504951 ALDH1B1P30837 517 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 IL13P35225 146 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 BRPF1P55201 1214 aaPredicted RBP8.23□□□□□ -1.09
GYPB-204ENST00000504951 ST5P78524 1137 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 CST9Q5W186 159 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 MAP1SQ66K74 1059 aaPredicted RBP8.23□□□□□ -1.09
GYPB-204ENST00000504951 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
GYPB-204ENST00000504951 CNBD1Q8NA66 436 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 MCOLN1Q9GZU1 580 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 LGR6Q9HBX8 967 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 PGAP2Q9UHJ9 254 aa8.23□□□□□ -1.09
GYPB-204ENST00000504951 RIMBP2O15034 1052 aa8.22□□□□□ -1.09
GYPB-204ENST00000504951 CAMTA2O94983 1202 aa8.22□□□□□ -1.09
GYPB-204ENST00000504951 EAPPQ56P03 285 aaPredicted RBP8.22□□□□□ -1.09
GYPB-204ENST00000504951 SULT6B1Q6IMI4 303 aa8.22□□□□□ -1.09
GYPB-204ENST00000504951 AEBP1Q8IUX7 1158 aa8.22□□□□□ -1.09
GYPB-204ENST00000504951 VPS33BQ9H267 617 aa8.22□□□□□ -1.09
GYPB-204ENST00000504951 ABT1Q9ULW3 272 aaKnown RBP8.22□□□□□ -1.09
GYPB-204ENST00000504951 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
GYPB-204ENST00000504951 SNED1Q8TER0 1413 aa8.21□□□□□ -1.09
GYPB-204ENST00000504951 CANXP27824 592 aaKnown RBP8.21□□□□□ -1.1
GYPB-204ENST00000504951 IARSP41252 1262 aaKnown RBP8.21□□□□□ -1.1
GYPB-204ENST00000504951 SLC39A6Q13433 755 aa8.21□□□□□ -1.1
GYPB-204ENST00000504951 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
GYPB-204ENST00000504951 SAPCD2Q86UD0 394 aa8.21□□□□□ -1.1
GYPB-204ENST00000504951 COL11A2P13942 1736 aaPredicted RBP8.2□□□□□ -1.1
GYPB-204ENST00000504951 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
GYPB-204ENST00000504951 ZNF790Q6PG37 636 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 TPTE2Q6XPS3 522 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 SYNE4Q8N205 404 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
GYPB-204ENST00000504951 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 SAGE1Q9NXZ1 904 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 RNF123Q5XPI4 1314 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 HEG1Q9ULI3 1381 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 UBR2Q8IWV8 1755 aa8.2□□□□□ -1.1
GYPB-204ENST00000504951 TNRC18O15417 2968 aaPredicted RBP8.19□□□□□ -1.1
GYPB-204ENST00000504951 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
GYPB-204ENST00000504951 SCNN1DP51172 638 aa8.19□□□□□ -1.1
GYPB-204ENST00000504951 EIF6P56537 245 aaKnown RBP8.19□□□□□ -1.1
GYPB-204ENST00000504951 CRY2Q49AN0 593 aa8.19□□□□□ -1.1
GYPB-204ENST00000504951 CYP4F22Q6NT55 531 aa8.19□□□□□ -1.1
GYPB-204ENST00000504951 ZNF277Q9NRM2 450 aaPredicted RBP8.19□□□□□ -1.1
GYPB-204ENST00000504951 TIMELESSQ9UNS1 1208 aa8.19□□□□□ -1.1
GYPB-204ENST00000504951 TRPM7Q96QT4 1865 aa8.19□□□□□ -1.1
GYPB-204ENST00000504951 SCN7AQ01118 1682 aa8.18□□□□□ -1.1
GYPB-204ENST00000504951 LTBP1Q14766 1721 aa8.18□□□□□ -1.1
GYPB-204ENST00000504951 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
GYPB-204ENST00000504951 HOXA10P31260 410 aaPredicted RBP8.18□□□□□ -1.1
GYPB-204ENST00000504951 NOGQ13253 232 aa8.18□□□□□ -1.1
GYPB-204ENST00000504951 TTC5Q8N0Z6 440 aa8.18□□□□□ -1.1
GYPB-204ENST00000504951 ZNF496Q96IT1 587 aaPredicted RBP8.18□□□□□ -1.1
GYPB-204ENST00000504951 TBC1D2BQ9UPU7 963 aa8.18□□□□□ -1.1
GYPB-204ENST00000504951 ZNF652Q9Y2D9 606 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms