RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 URI1O94763 535 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 YEATS4O95619 227 aa19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 LDHCP07864 332 aa19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 MCM5P33992 734 aa19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 UVSSAQ2YD98 709 aa19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 ORC3Q9UBD5 711 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 LARP6Q9BRS8 491 aaKnown RBP19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 ZSCAN16Q9H4T2 348 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 ATP5J2-PTCD1G3V325 749 aa19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 GBP2P32456 591 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-203ENST00000504120 GDPD2Q9HCC8 539 aa19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 USO1O60763 962 aaKnown RBP19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 UQCRFS1P1P0C7P4 283 aa19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 KANK3Q6NY19 840 aa19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 ANKRD13DQ6ZTN6 518 aa19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 METAP2P50579 478 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 MFSD6Q6ZSS7 791 aa19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 NUP88Q99567 741 aaPredicted RBP19.1■□□□□ 0.65
PCDHA1-203ENST00000504120 SSR1P43307 286 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 AMPD3Q01432 767 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 TRIM21P19474 475 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 SDSP20132 328 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 PDE4BQ07343 736 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 EZRP15311 586 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 EHMT1Q9H9B1 1298 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 ANKRD44Q8N8A2 993 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 SNRKQ9NRH2 765 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 TCP11L1Q9NUJ3 509 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 TNNT1P13805 278 aa19.09■□□□□ 0.65
PCDHA1-203ENST00000504120 ANAPC15P60006 121 aa19.08■□□□□ 0.65
PCDHA1-203ENST00000504120 TSHZ3Q63HK5 1081 aa19.08■□□□□ 0.65
PCDHA1-203ENST00000504120 ZFYP08048 801 aaPredicted RBP19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 TMX3Q96JJ7 454 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 MEIS3Q99687 375 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 ALDH1L1O75891 902 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 BAG3O95817 575 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 ZNF165P49910 485 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 SPTY2D1Q68D10 685 aaPredicted RBP19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 PPP4R3AQ6IN85 833 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 CALML4Q96GE6 196 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 UBA5Q9GZZ9 404 aa19.08■□□□□ 0.64
PCDHA1-203ENST00000504120 ADCY5O95622 1261 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 PDE1AP54750 535 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 DNAI2Q9GZS0 605 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 ADAMTS2O95450 1211 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 ZSCAN22P10073 491 aaPredicted RBP19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 CCDC102BQ68D86 513 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 GOLGA6L9A6NEM1 432 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 USP8P40818 1118 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 PAFAH1B1P43034 410 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 MICU3Q86XE3 530 aa19.07■□□□□ 0.64
PCDHA1-203ENST00000504120 MRPL50Q8N5N7 158 aaKnown RBP19.06■□□□□ 0.64
PCDHA1-203ENST00000504120 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
PCDHA1-203ENST00000504120 HAND2P61296 217 aa19.06■□□□□ 0.64
PCDHA1-203ENST00000504120 KAT14Q9H8E8 782 aa19.06■□□□□ 0.64
PCDHA1-203ENST00000504120 CGNQ9P2M7 1197 aaKnown RBP19.06■□□□□ 0.64
PCDHA1-203ENST00000504120 TSPY2A6NKD2 308 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 TMC6Q7Z403 805 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 BIN1O00499 593 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 ATP8B2P98198 1209 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 CADPS2Q86UW7 1296 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 POLR3AO14802 1390 aaPredicted RBP19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 PZPP20742 1482 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 MTIF2P46199 727 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 LUZP1Q86V48 1076 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 FAM114A1Q8IWE2 563 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 CPLX3Q8WVH0 158 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
PCDHA1-203ENST00000504120 ESYT1Q9BSJ8 1104 aa19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 TDRD12Q587J7 1177 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 SLC26A6Q9BXS9 759 aa19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 UBA7P41226 1012 aa19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 TAF3Q5VWG9 929 aa19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 CCDC144CPQ8IYA2 1237 aa19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 BRF1Q92994 677 aa19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 TRMT1Q9NXH9 659 aaKnown RBP19.04■□□□□ 0.64
PCDHA1-203ENST00000504120 POTEB2H3BUK9 544 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 NEBLO76041 1014 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 PRKCSHP14314 528 aaPredicted RBP19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 ANXA1P04083 346 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 ZSCAN23Q3MJ62 389 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 C6orf229H3BNL8 230 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 CALRP27797 417 aaKnown RBP19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 C16orf45Q96MC5 204 aaPredicted RBP19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 KRT23Q9C075 422 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 LRRC27Q9C0I9 530 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 CCDC152Q4G0S7 254 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 CCDC150Q8NCX0 1101 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 PPIP5K1Q6PFW1 1433 aa19.03■□□□□ 0.64
PCDHA1-203ENST00000504120 CETN1Q12798 172 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 CRNKL1Q9BZJ0 848 aaKnown RBP19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 LRSAM1Q6UWE0 723 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 TMTC2Q8N394 836 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 SHTN1A0MZ66 631 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 BMP15O95972 392 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms