RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 LARP6Q9BRS8 491 aaKnown RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 C9orf78Q9NZ63 289 aaPredicted RBP6.19□□□□□ -1.42
CLDND1-208ENST00000503004 PXDNLA1KZ92 1463 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 PIP4K2AP48426 406 aaPredicted RBP6.18□□□□□ -1.42
CLDND1-208ENST00000503004 KLHL40Q2TBA0 621 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 AMOTQ4VCS5 1084 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 AXDND1Q5T1B0 1012 aaPredicted RBP6.18□□□□□ -1.42
CLDND1-208ENST00000503004 CLEC17AQ6ZS10 378 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 KRT28Q7Z3Y7 464 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 PROSER2Q86WR7 435 aaPredicted RBP6.18□□□□□ -1.42
CLDND1-208ENST00000503004 MYRIPQ8NFW9 859 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 CARD10Q9BWT7 1032 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 LMBRD1Q9NUN5 540 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 SPG7Q9UQ90 795 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.18□□□□□ -1.42
CLDND1-208ENST00000503004 CACNA1FO60840 1977 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 HOXB7P09629 217 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 MCCP23508 829 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 KCNV2Q8TDN2 545 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 CABLES1Q8TDN4 633 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 CWC22Q9HCG8 908 aaKnown RBP6.18□□□□□ -1.42
CLDND1-208ENST00000503004 MED1Q15648 1581 aaPredicted RBP6.18□□□□□ -1.42
CLDND1-208ENST00000503004 USP54Q70EL1 1684 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 ERBB3P21860 1342 aa6.18□□□□□ -1.42
CLDND1-208ENST00000503004 NPHP4O75161 1426 aaPredicted RBP6.17□□□□□ -1.42
CLDND1-208ENST00000503004 RAB11FIP3O75154 756 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 MYL6BP14649 208 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 NLRP2Q9NX02 1062 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 RBM27Q9P2N5 1060 aaKnown RBP6.17□□□□□ -1.42
CLDND1-208ENST00000503004 NSFL1CQ9UNZ2 370 aaKnown RBP6.17□□□□□ -1.42
CLDND1-208ENST00000503004 CPA1P15085 419 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 CSPP1Q1MSJ5 1256 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 KSR2Q6VAB6 950 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 RASEFQ8IZ41 740 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 NFATC2IPQ8NCF5 419 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 KLHDC4Q8TBB5 520 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 GPT2Q8TD30 523 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 SIL1Q9H173 461 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 SGSM2O43147 1006 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 HSPA4P34932 840 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 CHRNA2Q15822 529 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 HS1BP3Q53T59 392 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 CLASRPQ8N2M8 674 aaKnown RBP6.17□□□□□ -1.42
CLDND1-208ENST00000503004 KAZALD1Q96I82 304 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 TIGD1Q96MW7 591 aa6.17□□□□□ -1.42
CLDND1-208ENST00000503004 TUBGCP6Q96RT7 1819 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 SLFN14P0C7P3 912 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 U2AF2P26368 475 aaKnown RBP eCLIP6.16□□□□□ -1.421e-8■■□□□ 13.8
CLDND1-208ENST00000503004 ANAPC15P60006 121 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 ZSCAN23Q3MJ62 389 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 ZNF790Q6PG37 636 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
CLDND1-208ENST00000503004 CNTROBQ8N137 903 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 DDX54Q8TDD1 881 aaKnown RBP6.16□□□□□ -1.42
CLDND1-208ENST00000503004 SUCLG2Q96I99 432 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 BICC1Q9H694 974 aaKnown RBP6.16□□□□□ -1.42
CLDND1-208ENST00000503004 GDPD2Q9HCC8 539 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 AOX1Q06278 1338 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 RAD50Q92878 1312 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 PTMAP06454 111 aaKnown RBP6.16□□□□□ -1.42
CLDND1-208ENST00000503004 PTMSP20962 102 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 CUL4AQ13619 759 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 PDIA6Q15084 440 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 RAPGEF4Q8WZA2 1011 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 ZKSCAN5Q9Y2L8 839 aa6.16□□□□□ -1.42
CLDND1-208ENST00000503004 HEG1Q9ULI3 1381 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 GRM8O00222 908 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 CSB-PGBD3P0DP91 1061 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 MTX1Q13505 466 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 RIC3Q7Z5B4 369 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 AACSQ86V21 672 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 EGFL6Q8IUX8 553 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 RNF214Q8ND24 703 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 ZNF496Q96IT1 587 aaPredicted RBP6.15□□□□□ -1.42
CLDND1-208ENST00000503004 LSG1Q9H089 658 aaKnown RBP6.15□□□□□ -1.42
CLDND1-208ENST00000503004 CCDC8Q9H0W5 538 aaPredicted RBP6.15□□□□□ -1.42
CLDND1-208ENST00000503004 C19orf44Q9H6X5 657 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 DDX21Q9NR30 783 aaKnown RBP eCLIP6.15□□□□□ -1.42
CLDND1-208ENST00000503004 TLR7Q9NYK1 1049 aaKnown RBP6.15□□□□□ -1.42
CLDND1-208ENST00000503004 TMEM63CQ9P1W3 806 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 SNX14Q9Y5W7 946 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 NPHP3Q7Z494 1330 aa6.15□□□□□ -1.42
CLDND1-208ENST00000503004 C1orf167Q5SNV9 1468 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 GLRX3O76003 335 aaKnown RBP6.15□□□□□ -1.43
CLDND1-208ENST00000503004 SASH1O94885 1247 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 BRD1O95696 1058 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 IFIT2P09913 472 aaKnown RBP6.15□□□□□ -1.43
CLDND1-208ENST00000503004 PRIM1P49642 420 aaKnown RBP6.15□□□□□ -1.43
CLDND1-208ENST00000503004 MCM2P49736 904 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 PTH1RQ03431 593 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 COL9A3Q14050 684 aaPredicted RBP6.15□□□□□ -1.43
CLDND1-208ENST00000503004 HSP90AB4PQ58FF6 505 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 COPS6Q7L5N1 327 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 C17orf53Q8N3J3 647 aaPredicted RBP6.15□□□□□ -1.43
CLDND1-208ENST00000503004 LINS1Q8NG48 757 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.43
CLDND1-208ENST00000503004 RBSNQ9H1K0 784 aa6.15□□□□□ -1.43
CLDND1-208ENST00000503004 DIAPH3Q9NSV4 1193 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms