RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 KIF20BQ96Q89 1820 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 TONSLQ96HA7 1378 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 CNTNAP4Q9C0A0 1308 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 USP42Q9H9J4 1324 aaKnown RBP7.13□□□□□ -1.27
GYPB-202ENST00000502664 GLTPD2A6NH11 291 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 POLRMTO00411 1230 aaKnown RBP7.13□□□□□ -1.27
GYPB-202ENST00000502664 VEGFAP15692 232 aaPredicted RBP7.13□□□□□ -1.27
GYPB-202ENST00000502664 HMGB2P26583 209 aaKnown RBP7.13□□□□□ -1.27
GYPB-202ENST00000502664 TM4SF1P30408 202 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 RC3H1Q5TC82 1133 aaKnown RBP7.13□□□□□ -1.27
GYPB-202ENST00000502664 IFNL2Q8IZJ0 200 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 TIAM2Q8IVF5 1701 aa7.13□□□□□ -1.27
GYPB-202ENST00000502664 NFKBIEO00221 500 aa7.12□□□□□ -1.27
GYPB-202ENST00000502664 NRG2O14511 850 aaPredicted RBP7.12□□□□□ -1.27
GYPB-202ENST00000502664 PTCD1O75127 700 aaKnown RBP7.12□□□□□ -1.27
GYPB-202ENST00000502664 CRKLP46109 303 aaKnown RBP7.12□□□□□ -1.27
GYPB-202ENST00000502664 FAM161AQ3B820 660 aa7.12□□□□□ -1.27
GYPB-202ENST00000502664 INTS5Q6P9B9 1019 aaKnown RBP7.12□□□□□ -1.27
GYPB-202ENST00000502664 TJP1Q07157 1748 aa7.12□□□□□ -1.27
GYPB-202ENST00000502664 ZNF831Q5JPB2 1677 aa7.12□□□□□ -1.27
GYPB-202ENST00000502664 CARMIL3Q8ND23 1372 aa7.11□□□□□ -1.27
GYPB-202ENST00000502664 ANKRD26Q9UPS8 1709 aa7.11□□□□□ -1.27
GYPB-202ENST00000502664 LMNB1P20700 586 aa7.11□□□□□ -1.27
GYPB-202ENST00000502664 USPL1Q5W0Q7 1092 aa7.11□□□□□ -1.27
GYPB-202ENST00000502664 CCDC88AQ3V6T2 1871 aa7.11□□□□□ -1.27
GYPB-202ENST00000502664 KIF24Q5T7B8 1368 aa7.1□□□□□ -1.27
GYPB-202ENST00000502664 WASHC2AQ641Q2 1341 aa7.1□□□□□ -1.27
GYPB-202ENST00000502664 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
GYPB-202ENST00000502664 NFIXQ14938 502 aa7.1□□□□□ -1.27
GYPB-202ENST00000502664 ZNF787Q6DD87 383 aa7.1□□□□□ -1.27
GYPB-202ENST00000502664 PRKD2Q9BZL6 878 aa7.1□□□□□ -1.27
GYPB-202ENST00000502664 POLKQ9UBT6 870 aa7.1□□□□□ -1.27
GYPB-202ENST00000502664 SEPT9Q9UHD8 586 aaPredicted RBP7.1□□□□□ -1.27
GYPB-202ENST00000502664 TSR3Q9UJK0 312 aaKnown RBP7.1□□□□□ -1.27
GYPB-202ENST00000502664 AFDNP55196 1824 aaKnown RBP7.1□□□□□ -1.27
GYPB-202ENST00000502664 CNTNAP1P78357 1384 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 ERVV-2B6SEH9 535 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 DDNO94850 711 aaPredicted RBP7.09□□□□□ -1.27
GYPB-202ENST00000502664 PDE4AP27815 886 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 VEGFBP49765 207 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 LBX1P52954 281 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 CABP4P57796 275 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 MAP3K9P80192 1104 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 DNAJC10Q8IXB1 793 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 CCDC24Q8N4L8 307 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 NRXN2Q9P2S2 1712 aa7.09□□□□□ -1.27
GYPB-202ENST00000502664 DLEC1Q9Y238 1755 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 ZC3H4Q9UPT8 1303 aaKnown RBP7.08□□□□□ -1.28
GYPB-202ENST00000502664 TNNT2P45379 298 aaPredicted RBP7.08□□□□□ -1.28
GYPB-202ENST00000502664 C2CD5Q86YS7 1000 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 AEBP1Q8IUX7 1158 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 FBXW7Q969H0 707 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 ZNF775Q96BV0 537 aaPredicted RBP7.08□□□□□ -1.28
GYPB-202ENST00000502664 ABHD8Q96I13 439 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 HPS5Q9UPZ3 1129 aa7.08□□□□□ -1.28
GYPB-202ENST00000502664 SOS1Q07889 1333 aaPredicted RBP7.07□□□□□ -1.28
GYPB-202ENST00000502664 PASKQ96RG2 1323 aa7.07□□□□□ -1.28
GYPB-202ENST00000502664 C21orf2O43822 256 aa7.07□□□□□ -1.28
GYPB-202ENST00000502664 SERPINB2P05120 415 aa7.07□□□□□ -1.28
GYPB-202ENST00000502664 ERFEQ4G0M1 354 aa7.07□□□□□ -1.28
GYPB-202ENST00000502664 TYW1BQ6NUM6 668 aa7.07□□□□□ -1.28
GYPB-202ENST00000502664 ZNF530Q6P9A1 599 aaPredicted RBP7.07□□□□□ -1.28
GYPB-202ENST00000502664 TTLL6Q8N841 843 aa7.07□□□□□ -1.28
GYPB-202ENST00000502664 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.07□□□□□ -1.28
GYPB-202ENST00000502664 VIRMAQ69YN4 1812 aaKnown RBP7.06□□□□□ -1.28
GYPB-202ENST00000502664 HSPA8P11142 646 aaKnown RBP7.06□□□□□ -1.28
GYPB-202ENST00000502664 CTCFP49711 727 aaPredicted RBP7.06□□□□□ -1.28
GYPB-202ENST00000502664 MTHFSP49914 203 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
GYPB-202ENST00000502664 SLC39A6Q13433 755 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 BICDL1Q6ZP65 573 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 LRCH3Q96II8 777 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 EMILIN3Q9NT22 766 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 ZBTB1Q9Y2K1 713 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 COL11A2P13942 1736 aaPredicted RBP7.06□□□□□ -1.28
GYPB-202ENST00000502664 ANKRD31Q8N7Z5 1873 aa7.06□□□□□ -1.28
GYPB-202ENST00000502664 ZPR1O75312 459 aa7.05□□□□□ -1.28
GYPB-202ENST00000502664 CYP19A1P11511 503 aaPredicted RBP7.05□□□□□ -1.28
GYPB-202ENST00000502664 TJAP1Q5JTD0 557 aa7.05□□□□□ -1.28
GYPB-202ENST00000502664 ZNF622Q969S3 477 aaKnown RBP eCLIP7.05□□□□□ -1.28
GYPB-202ENST00000502664 LGR6Q9HBX8 967 aa7.05□□□□□ -1.28
GYPB-202ENST00000502664 NARFQ9UHQ1 456 aa7.05□□□□□ -1.28
GYPB-202ENST00000502664 V9GY48 417 aaPredicted RBP7.05□□□□□ -1.28
GYPB-202ENST00000502664 COL15A1P39059 1388 aa7.05□□□□□ -1.28
GYPB-202ENST00000502664 FER1L6Q2WGJ9 1857 aa7.04□□□□□ -1.28
GYPB-202ENST00000502664 TRIM6-TRIM34B2RNG4 842 aa7.04□□□□□ -1.28
GYPB-202ENST00000502664 H0YIN7 160 aa7.04□□□□□ -1.28
GYPB-202ENST00000502664 PLEKHO1Q53GL0 409 aaPredicted RBP7.04□□□□□ -1.28
GYPB-202ENST00000502664 C6orf132Q5T0Z8 1188 aa7.04□□□□□ -1.28
GYPB-202ENST00000502664 TBC1D9BQ66K14 1250 aa7.04□□□□□ -1.28
GYPB-202ENST00000502664 DDX27Q96GQ7 796 aaKnown RBP7.04□□□□□ -1.28
GYPB-202ENST00000502664 LARP6Q9BRS8 491 aaKnown RBP7.04□□□□□ -1.28
GYPB-202ENST00000502664 TAF1DQ9H5J8 278 aaPredicted RBP7.04□□□□□ -1.28
GYPB-202ENST00000502664 ZNF541Q9H0D2 1346 aa7.03□□□□□ -1.28
GYPB-202ENST00000502664 DICER1Q9UPY3 1922 aaKnown RBP7.03□□□□□ -1.28
GYPB-202ENST00000502664 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
GYPB-202ENST00000502664 TMEM88BA6NKF7 163 aa7.03□□□□□ -1.28
GYPB-202ENST00000502664 HSP90AB1P08238 724 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms