RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 TTLL6Q8N841 843 aa5.94□□□□□ -1.46
MATR3-202ENST00000502422 ABHD8Q96I13 439 aa5.94□□□□□ -1.46
MATR3-202ENST00000502422 USP42Q9H9J4 1324 aaKnown RBP5.93□□□□□ -1.46
MATR3-202ENST00000502422 KDRP35968 1356 aa5.93□□□□□ -1.46
MATR3-202ENST00000502422 TONSLQ96HA7 1378 aa5.93□□□□□ -1.46
MATR3-202ENST00000502422 H0YIN7 160 aa5.93□□□□□ -1.46
MATR3-202ENST00000502422 ERFEQ4G0M1 354 aa5.93□□□□□ -1.46
MATR3-202ENST00000502422 ZC3H15Q8WU90 426 aaKnown RBP5.93□□□□□ -1.46
MATR3-202ENST00000502422 TESK2Q96S53 571 aa5.93□□□□□ -1.46
MATR3-202ENST00000502422 PPP4R2Q9NY27 417 aa5.93□□□□□ -1.46
MATR3-202ENST00000502422 POLRMTO00411 1230 aaKnown RBP5.92□□□□□ -1.46
MATR3-202ENST00000502422 MTHFSP49914 203 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 PLEKHO1Q53GL0 409 aaPredicted RBP5.92□□□□□ -1.46
MATR3-202ENST00000502422 CDCA8Q53HL2 280 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 USPL1Q5W0Q7 1092 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 THSD7BQ9C0I4 1608 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 MYH14Q7Z406 1995 aaKnown RBP5.92□□□□□ -1.46
MATR3-202ENST00000502422 PITPNM2Q9BZ72 1349 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 KIF20BQ96Q89 1820 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 COL5A3P25940 1745 aaPredicted RBP5.92□□□□□ -1.46
MATR3-202ENST00000502422 TM4SF1P30408 202 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 LBX1P52954 281 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
MATR3-202ENST00000502422 C1orf141Q5JVX7 400 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 IPO9Q96P70 1041 aaKnown RBP5.92□□□□□ -1.46
MATR3-202ENST00000502422 ZNF831Q5JPB2 1677 aa5.92□□□□□ -1.46
MATR3-202ENST00000502422 POTECB2RU33 542 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 SERPINB2P05120 415 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 ZNF530Q6P9A1 599 aaPredicted RBP5.91□□□□□ -1.46
MATR3-202ENST00000502422 C2CD5Q86YS7 1000 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 NFATC2IPQ8NCF5 419 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 ZNF622Q969S3 477 aaKnown RBP eCLIP5.91□□□□□ -1.462e-13■□□□□ 9.5
MATR3-202ENST00000502422 CCDC85CA6NKD9 419 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 KDM6AO15550 1401 aaPredicted RBP5.91□□□□□ -1.46
MATR3-202ENST00000502422 CA12O43570 354 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 PDIA6Q15084 440 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 AMOTQ4VCS5 1084 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 TIAM2Q8IVF5 1701 aa5.91□□□□□ -1.46
MATR3-202ENST00000502422 CNTNAP1P78357 1384 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 NCAPD2Q15021 1401 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 IQCA1LA6NCM1 817 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 TMEM88BA6NKF7 163 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 NFKBIEO00221 500 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 NPHP1O15259 732 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 DDNO94850 711 aaPredicted RBP5.9□□□□□ -1.46
MATR3-202ENST00000502422 TNNT2P45379 298 aaPredicted RBP5.9□□□□□ -1.46
MATR3-202ENST00000502422 VEGFBP49765 207 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 NFIXQ14938 502 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 RBM26Q5T8P6 1007 aaKnown RBP5.9□□□□□ -1.46
MATR3-202ENST00000502422 BEGAINQ9BUH8 593 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 BRPF3Q9ULD4 1205 aa5.9□□□□□ -1.46
MATR3-202ENST00000502422 C21orf2O43822 256 aa5.9□□□□□ -1.47
MATR3-202ENST00000502422 EIF4A2Q14240 407 aaKnown RBP5.9□□□□□ -1.47
MATR3-202ENST00000502422 SMYD5Q6GMV2 418 aa5.9□□□□□ -1.47
MATR3-202ENST00000502422 BICDL1Q6ZP65 573 aa5.9□□□□□ -1.47
MATR3-202ENST00000502422 POLKQ9UBT6 870 aa5.9□□□□□ -1.47
MATR3-202ENST00000502422 NARFQ9UHQ1 456 aa5.9□□□□□ -1.47
MATR3-202ENST00000502422 SPDYE16A6NNV3 312 aaPredicted RBP5.89□□□□□ -1.47
MATR3-202ENST00000502422 PDE6BP35913 854 aa5.89□□□□□ -1.47
MATR3-202ENST00000502422 MAP2K1Q02750 393 aaPredicted RBP5.89□□□□□ -1.47
MATR3-202ENST00000502422 DEFB115Q30KQ5 88 aa5.89□□□□□ -1.47
MATR3-202ENST00000502422 EAPPQ56P03 285 aaPredicted RBP5.89□□□□□ -1.47
MATR3-202ENST00000502422 INTS5Q6P9B9 1019 aaKnown RBP5.89□□□□□ -1.47
MATR3-202ENST00000502422 LDHDQ86WU2 507 aa5.89□□□□□ -1.47
MATR3-202ENST00000502422 TAOK3Q9H2K8 898 aa5.89□□□□□ -1.47
MATR3-202ENST00000502422 WBP1LQ9NX94 342 aa5.89□□□□□ -1.47
MATR3-202ENST00000502422 PDZRN3Q9UPQ7 1066 aa5.89□□□□□ -1.47
MATR3-202ENST00000502422 AFDNP55196 1824 aaKnown RBP5.88□□□□□ -1.47
MATR3-202ENST00000502422 B4GALNT3Q6L9W6 998 aa5.88□□□□□ -1.47
MATR3-202ENST00000502422 DNAJC10Q8IXB1 793 aa5.88□□□□□ -1.47
MATR3-202ENST00000502422 CARD14Q9BXL6 1004 aa5.88□□□□□ -1.47
MATR3-202ENST00000502422 VIRMAQ69YN4 1812 aaKnown RBP5.88□□□□□ -1.47
MATR3-202ENST00000502422 DICER1Q9UPY3 1922 aaKnown RBP5.88□□□□□ -1.47
MATR3-202ENST00000502422 OXER1Q8TDS5 423 aa5.88□□□□□ -1.47
MATR3-202ENST00000502422 COL15A1P39059 1388 aa5.88□□□□□ -1.47
MATR3-202ENST00000502422 MAP3K9P80192 1104 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 POLR3GLQ9BT43 218 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 ZMYND15Q9H091 742 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 ABT1Q9ULW3 272 aaKnown RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 SOS1Q07889 1333 aaPredicted RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 PASKQ96RG2 1323 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 DLEC1Q9Y238 1755 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 ANP32CO43423 234 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 ZMYND10O75800 440 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 HSPA8P11142 646 aaKnown RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 CYP19A1P11511 503 aaPredicted RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 CANXP27824 592 aaKnown RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 GRM1Q13255 1194 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 CNKSR1Q969H4 720 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 BRIP1Q9BX63 1249 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 TAF1DQ9H5J8 278 aaPredicted RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 ZBTB1Q9Y2K1 713 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 ZNF330Q9Y3S2 320 aaPredicted RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 WDR33Q9C0J8 1336 aaKnown RBP5.87□□□□□ -1.47
MATR3-202ENST00000502422 ANKRD26Q9UPS8 1709 aa5.87□□□□□ -1.47
MATR3-202ENST00000502422 C3orf67Q6ZVT6 689 aa5.86□□□□□ -1.47
MATR3-202ENST00000502422 PNMA8AQ86V59 439 aaPredicted RBP5.86□□□□□ -1.47
MATR3-202ENST00000502422 CCDC24Q8N4L8 307 aa5.86□□□□□ -1.47
MATR3-202ENST00000502422 RSPH6AQ9H0K4 717 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms