RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 ISCA1Q9BUE6 129 aa20.64■□□□□ 0.89
COL1A2-212ENST00000497316 UTP14AQ9BVJ6 771 aaKnown RBP20.64■□□□□ 0.89
COL1A2-212ENST00000497316 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
COL1A2-212ENST00000497316 ERFEQ4G0M1 354 aa20.63■□□□□ 0.89
COL1A2-212ENST00000497316 SLC10A5Q5PT55 438 aa20.63■□□□□ 0.89
COL1A2-212ENST00000497316 RIC3Q7Z5B4 369 aa20.63■□□□□ 0.89
COL1A2-212ENST00000497316 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
COL1A2-212ENST00000497316 CNKSR1Q969H4 720 aa20.63■□□□□ 0.89
COL1A2-212ENST00000497316 ABCC12Q96J65 1359 aa20.62■□□□□ 0.89
COL1A2-212ENST00000497316 SLC4A2P04920 1241 aa20.62■□□□□ 0.89
COL1A2-212ENST00000497316 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL1A2-212ENST00000497316 NPR1P16066 1061 aa20.61■□□□□ 0.89
COL1A2-212ENST00000497316 CRY2Q49AN0 593 aa20.61■□□□□ 0.89
COL1A2-212ENST00000497316 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
COL1A2-212ENST00000497316 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
COL1A2-212ENST00000497316 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
COL1A2-212ENST00000497316 GPBP1L1Q9HC44 474 aaPredicted RBP20.6■□□□□ 0.89
COL1A2-212ENST00000497316 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
COL1A2-212ENST00000497316 ARHGAP27Q6ZUM4 889 aa20.59■□□□□ 0.89
COL1A2-212ENST00000497316 METTL22Q9BUU2 404 aaPredicted RBP20.59■□□□□ 0.89
COL1A2-212ENST00000497316 TRMT112Q9UI30 125 aaKnown RBP20.59■□□□□ 0.89
COL1A2-212ENST00000497316 SH3TC1Q8TE82 1336 aa20.58■□□□□ 0.89
COL1A2-212ENST00000497316 ATP5J2-PTCD1G3V325 749 aa20.58■□□□□ 0.89
COL1A2-212ENST00000497316 FLIIQ13045 1269 aa20.58■□□□□ 0.89
COL1A2-212ENST00000497316 G2E3Q7L622 706 aa20.58■□□□□ 0.89
COL1A2-212ENST00000497316 ALDH1B1P30837 517 aa20.57■□□□□ 0.88
COL1A2-212ENST00000497316 HOXA10P31260 410 aaPredicted RBP20.57■□□□□ 0.88
COL1A2-212ENST00000497316 CCDC191Q8NCU4 936 aa20.57■□□□□ 0.88
COL1A2-212ENST00000497316 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
COL1A2-212ENST00000497316 NLRP3Q96P20 1036 aa20.57■□□□□ 0.88
COL1A2-212ENST00000497316 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
COL1A2-212ENST00000497316 ADCY9O60503 1353 aa20.57■□□□□ 0.88
COL1A2-212ENST00000497316 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
COL1A2-212ENST00000497316 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
COL1A2-212ENST00000497316 CDCA7LQ96GN5 454 aa20.56■□□□□ 0.88
COL1A2-212ENST00000497316 MYD88Q99836 296 aa20.56■□□□□ 0.88
COL1A2-212ENST00000497316 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
COL1A2-212ENST00000497316 SOGA3Q5TF21 947 aa20.55■□□□□ 0.88
COL1A2-212ENST00000497316 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
COL1A2-212ENST00000497316 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
COL1A2-212ENST00000497316 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
COL1A2-212ENST00000497316 C7orf43Q8WVR3 580 aa20.54■□□□□ 0.88
COL1A2-212ENST00000497316 RPGRQ92834 1020 aaKnown RBP20.54■□□□□ 0.88
COL1A2-212ENST00000497316 CRAMP1Q96RY5 1269 aa20.54■□□□□ 0.88
COL1A2-212ENST00000497316 C21orf2O43822 256 aa20.53■□□□□ 0.88
COL1A2-212ENST00000497316 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
COL1A2-212ENST00000497316 FKBP5Q13451 457 aaPredicted RBP20.53■□□□□ 0.88
COL1A2-212ENST00000497316 SYNE4Q8N205 404 aa20.53■□□□□ 0.88
COL1A2-212ENST00000497316 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
COL1A2-212ENST00000497316 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
COL1A2-212ENST00000497316 CACNA1SQ13698 1873 aa20.52■□□□□ 0.88
COL1A2-212ENST00000497316 C3orf67Q6ZVT6 689 aa20.52■□□□□ 0.88
COL1A2-212ENST00000497316 FAM89AQ96GI7 184 aa20.52■□□□□ 0.88
COL1A2-212ENST00000497316 RBM17Q96I25 401 aaKnown RBP20.52■□□□□ 0.88
COL1A2-212ENST00000497316 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
COL1A2-212ENST00000497316 IGKV5-2P06315 115 aa20.51■□□□□ 0.87
COL1A2-212ENST00000497316 HCLS1P14317 486 aaPredicted RBP20.51■□□□□ 0.87
COL1A2-212ENST00000497316 HSP90B1P14625 803 aaKnown RBP20.51■□□□□ 0.87
COL1A2-212ENST00000497316 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
COL1A2-212ENST00000497316 LAMB2P55268 1798 aa20.51■□□□□ 0.87
COL1A2-212ENST00000497316 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
COL1A2-212ENST00000497316 SBF1O95248 1867 aa20.5■□□□□ 0.87
COL1A2-212ENST00000497316 FER1L6Q2WGJ9 1857 aa20.5■□□□□ 0.87
COL1A2-212ENST00000497316 LTBP3Q9NS15 1303 aa20.5■□□□□ 0.87
COL1A2-212ENST00000497316 NFKBIEO00221 500 aa20.49■□□□□ 0.87
COL1A2-212ENST00000497316 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL1A2-212ENST00000497316 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
COL1A2-212ENST00000497316 ALDH1L2Q3SY69 923 aa20.49■□□□□ 0.87
COL1A2-212ENST00000497316 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
COL1A2-212ENST00000497316 NEURL1BA8MQ27 555 aa20.48■□□□□ 0.87
COL1A2-212ENST00000497316 IRS4O14654 1257 aaPredicted RBP20.48■□□□□ 0.87
COL1A2-212ENST00000497316 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
COL1A2-212ENST00000497316 MRPL50Q8N5N7 158 aaKnown RBP20.48■□□□□ 0.87
COL1A2-212ENST00000497316 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
COL1A2-212ENST00000497316 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
COL1A2-212ENST00000497316 CDHR2Q9BYE9 1310 aa20.48■□□□□ 0.87
COL1A2-212ENST00000497316 LMNB1P20700 586 aa20.47■□□□□ 0.87
COL1A2-212ENST00000497316 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
COL1A2-212ENST00000497316 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
COL1A2-212ENST00000497316 RASSF7Q02833 373 aa20.46■□□□□ 0.87
COL1A2-212ENST00000497316 CWF19L2Q2TBE0 894 aaKnown RBP20.46■□□□□ 0.87
COL1A2-212ENST00000497316 DDX46Q7L014 1031 aaKnown RBP20.46■□□□□ 0.87
COL1A2-212ENST00000497316 RTKN2Q8IZC4 609 aa20.46■□□□□ 0.87
COL1A2-212ENST00000497316 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
COL1A2-212ENST00000497316 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
COL1A2-212ENST00000497316 BBOX1O75936 387 aa20.45■□□□□ 0.86
COL1A2-212ENST00000497316 RTL5Q5HYW3 569 aaPredicted RBP20.45■□□□□ 0.86
COL1A2-212ENST00000497316 RNF181Q9P0P0 153 aa20.45■□□□□ 0.86
COL1A2-212ENST00000497316 ABCC4O15439 1325 aa20.45■□□□□ 0.86
COL1A2-212ENST00000497316 ZC3H4Q9UPT8 1303 aaKnown RBP20.45■□□□□ 0.86
COL1A2-212ENST00000497316 SNED1Q8TER0 1413 aa20.44■□□□□ 0.86
COL1A2-212ENST00000497316 H7C1W4 665 aa20.44■□□□□ 0.86
COL1A2-212ENST00000497316 PPEF1O14829 653 aaPredicted RBP20.44■□□□□ 0.86
COL1A2-212ENST00000497316 PDE8AO60658 829 aa20.44■□□□□ 0.86
COL1A2-212ENST00000497316 GCKRQ14397 625 aa20.44■□□□□ 0.86
COL1A2-212ENST00000497316 BEND3Q5T5X7 828 aa20.44■□□□□ 0.86
COL1A2-212ENST00000497316 PTPRCP08575 1304 aa20.44■□□□□ 0.86
COL1A2-212ENST00000497316 F6X3S4 739 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 PRELPP51888 382 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 BRPF1P55201 1214 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms