RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
FDPS-219ENST00000495308 PPP1R42Q7Z4L9 355 aa17.39■□□□□ 0.37
FDPS-219ENST00000495308 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
FDPS-219ENST00000495308 ISCA1Q9BUE6 129 aa17.39■□□□□ 0.37
FDPS-219ENST00000495308 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
FDPS-219ENST00000495308 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
FDPS-219ENST00000495308 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
FDPS-219ENST00000495308 CHD4Q14839 1912 aa17.37■□□□□ 0.37
FDPS-219ENST00000495308 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
FDPS-219ENST00000495308 PDE6BP35913 854 aa17.37■□□□□ 0.37
FDPS-219ENST00000495308 SSH1Q8WYL5 1049 aa17.37■□□□□ 0.37
FDPS-219ENST00000495308 METTL22Q9BUU2 404 aaPredicted RBP17.37■□□□□ 0.37
FDPS-219ENST00000495308 SLX4Q8IY92 1834 aa17.36■□□□□ 0.37
FDPS-219ENST00000495308 H0YIN7 160 aa17.36■□□□□ 0.37
FDPS-219ENST00000495308 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
FDPS-219ENST00000495308 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
FDPS-219ENST00000495308 TRMT112Q9UI30 125 aaKnown RBP17.36■□□□□ 0.37
FDPS-219ENST00000495308 RIC1Q4ADV7 1423 aa17.36■□□□□ 0.37
FDPS-219ENST00000495308 TAF1P21675 1872 aa17.35■□□□□ 0.37
FDPS-219ENST00000495308 PIM2Q9P1W9 311 aa17.35■□□□□ 0.37
FDPS-219ENST00000495308 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
FDPS-219ENST00000495308 F6X3S4 739 aa17.34■□□□□ 0.37
FDPS-219ENST00000495308 IGKV5-2P06315 115 aa17.34■□□□□ 0.37
FDPS-219ENST00000495308 MYH3P11055 1940 aa17.34■□□□□ 0.37
FDPS-219ENST00000495308 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
FDPS-219ENST00000495308 C3orf67Q6ZVT6 689 aa17.34■□□□□ 0.37
FDPS-219ENST00000495308 SH3TC1Q8TE82 1336 aa17.34■□□□□ 0.37
FDPS-219ENST00000495308 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
FDPS-219ENST00000495308 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.37
FDPS-219ENST00000495308 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
FDPS-219ENST00000495308 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
FDPS-219ENST00000495308 SRGNP10124 158 aa17.33■□□□□ 0.36
FDPS-219ENST00000495308 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.36
FDPS-219ENST00000495308 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.36
FDPS-219ENST00000495308 CWF19L2Q2TBE0 894 aaKnown RBP17.33■□□□□ 0.36
FDPS-219ENST00000495308 ALDH1L2Q3SY69 923 aa17.33■□□□□ 0.36
FDPS-219ENST00000495308 FAM89AQ96GI7 184 aa17.33■□□□□ 0.36
FDPS-219ENST00000495308 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
FDPS-219ENST00000495308 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
FDPS-219ENST00000495308 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
FDPS-219ENST00000495308 DALRD3Q5D0E6 543 aaKnown RBP17.32■□□□□ 0.36
FDPS-219ENST00000495308 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
FDPS-219ENST00000495308 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
FDPS-219ENST00000495308 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
FDPS-219ENST00000495308 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
FDPS-219ENST00000495308 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
FDPS-219ENST00000495308 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
FDPS-219ENST00000495308 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
FDPS-219ENST00000495308 NPR1P16066 1061 aa17.3■□□□□ 0.36
FDPS-219ENST00000495308 RARSP54136 660 aaKnown RBP17.3■□□□□ 0.36
FDPS-219ENST00000495308 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
FDPS-219ENST00000495308 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
FDPS-219ENST00000495308 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
FDPS-219ENST00000495308 CCDC88AQ3V6T2 1871 aa17.3■□□□□ 0.36
FDPS-219ENST00000495308 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
FDPS-219ENST00000495308 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
FDPS-219ENST00000495308 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
FDPS-219ENST00000495308 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
FDPS-219ENST00000495308 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
FDPS-219ENST00000495308 SBF1O95248 1867 aa17.29■□□□□ 0.36
FDPS-219ENST00000495308 FER1L6Q2WGJ9 1857 aa17.29■□□□□ 0.36
FDPS-219ENST00000495308 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
FDPS-219ENST00000495308 PTPRCP08575 1304 aa17.28■□□□□ 0.36
FDPS-219ENST00000495308 GRIN3BO60391 1043 aa17.28■□□□□ 0.36
FDPS-219ENST00000495308 PCCAP05165 728 aaPredicted RBP17.28■□□□□ 0.36
FDPS-219ENST00000495308 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
FDPS-219ENST00000495308 LINS1Q8NG48 757 aa17.28■□□□□ 0.36
FDPS-219ENST00000495308 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
FDPS-219ENST00000495308 COL4A1P02462 1669 aa17.27■□□□□ 0.36
FDPS-219ENST00000495308 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
FDPS-219ENST00000495308 GCKRQ14397 625 aa17.27■□□□□ 0.36
FDPS-219ENST00000495308 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
FDPS-219ENST00000495308 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
FDPS-219ENST00000495308 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
FDPS-219ENST00000495308 C21orf2O43822 256 aa17.25■□□□□ 0.35
FDPS-219ENST00000495308 BCAR3O75815 825 aa17.25■□□□□ 0.35
FDPS-219ENST00000495308 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
FDPS-219ENST00000495308 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
FDPS-219ENST00000495308 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
FDPS-219ENST00000495308 ABCC4O15439 1325 aa17.24■□□□□ 0.35
FDPS-219ENST00000495308 CDHR2Q9BYE9 1310 aa17.24■□□□□ 0.35
FDPS-219ENST00000495308 HOXA10P31260 410 aaPredicted RBP17.24■□□□□ 0.35
FDPS-219ENST00000495308 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
FDPS-219ENST00000495308 H7C1W4 665 aa17.23■□□□□ 0.35
FDPS-219ENST00000495308 ALDH1B1P30837 517 aa17.23■□□□□ 0.35
FDPS-219ENST00000495308 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
FDPS-219ENST00000495308 OLFM4Q6UX06 510 aa17.23■□□□□ 0.35
FDPS-219ENST00000495308 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
FDPS-219ENST00000495308 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
FDPS-219ENST00000495308 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
FDPS-219ENST00000495308 TIAM2Q8IVF5 1701 aa17.22■□□□□ 0.35
FDPS-219ENST00000495308 PDE8AO60658 829 aa17.22■□□□□ 0.35
FDPS-219ENST00000495308 CASP7P55210 303 aa17.22■□□□□ 0.35
FDPS-219ENST00000495308 RASSF7Q02833 373 aa17.22■□□□□ 0.35
FDPS-219ENST00000495308 FRAT1Q92837 279 aaPredicted RBP17.22■□□□□ 0.35
FDPS-219ENST00000495308 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
FDPS-219ENST00000495308 DICER1Q9UPY3 1922 aaKnown RBP17.21■□□□□ 0.35
FDPS-219ENST00000495308 ALDH1L1O75891 902 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms