RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
COL1A1-208ENST00000494334 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
COL1A1-208ENST00000494334 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
COL1A1-208ENST00000494334 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
COL1A1-208ENST00000494334 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
COL1A1-208ENST00000494334 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
COL1A1-208ENST00000494334 DNAAF4Q8WXU2 420 aa17.29■□□□□ 0.36
COL1A1-208ENST00000494334 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
COL1A1-208ENST00000494334 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
COL1A1-208ENST00000494334 IGKV5-2P06315 115 aa17.28■□□□□ 0.36
COL1A1-208ENST00000494334 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
COL1A1-208ENST00000494334 SYNE4Q8N205 404 aa17.28■□□□□ 0.36
COL1A1-208ENST00000494334 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
COL1A1-208ENST00000494334 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-208ENST00000494334 SH3TC1Q8TE82 1336 aa17.27■□□□□ 0.36
COL1A1-208ENST00000494334 F6X3S4 739 aa17.27■□□□□ 0.36
COL1A1-208ENST00000494334 SRGNP10124 158 aa17.27■□□□□ 0.36
COL1A1-208ENST00000494334 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.36
COL1A1-208ENST00000494334 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
COL1A1-208ENST00000494334 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
COL1A1-208ENST00000494334 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
COL1A1-208ENST00000494334 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.35
COL1A1-208ENST00000494334 CWF19L2Q2TBE0 894 aaKnown RBP17.26■□□□□ 0.35
COL1A1-208ENST00000494334 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL1A1-208ENST00000494334 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
COL1A1-208ENST00000494334 MASTLQ96GX5 879 aa17.26■□□□□ 0.35
COL1A1-208ENST00000494334 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
COL1A1-208ENST00000494334 ANKRD31Q8N7Z5 1873 aa17.26■□□□□ 0.35
COL1A1-208ENST00000494334 UTRNP46939 3433 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 RIC1Q4ADV7 1423 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 NEURL1BA8MQ27 555 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-208ENST00000494334 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
COL1A1-208ENST00000494334 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-208ENST00000494334 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
COL1A1-208ENST00000494334 PTPRCP08575 1304 aa17.24■□□□□ 0.35
COL1A1-208ENST00000494334 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
COL1A1-208ENST00000494334 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-208ENST00000494334 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-208ENST00000494334 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
COL1A1-208ENST00000494334 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-208ENST00000494334 BEND3Q5T5X7 828 aa17.24■□□□□ 0.35
COL1A1-208ENST00000494334 STYK1Q6J9G0 422 aa17.24■□□□□ 0.35
COL1A1-208ENST00000494334 LINS1Q8NG48 757 aa17.24■□□□□ 0.35
COL1A1-208ENST00000494334 NPR1P16066 1061 aa17.23■□□□□ 0.35
COL1A1-208ENST00000494334 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-208ENST00000494334 GOLGB1Q14789 3259 aaKnown RBP17.22■□□□□ 0.35
COL1A1-208ENST00000494334 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-208ENST00000494334 GCKRQ14397 625 aa17.22■□□□□ 0.35
COL1A1-208ENST00000494334 CNKSR1Q969H4 720 aa17.22■□□□□ 0.35
COL1A1-208ENST00000494334 NOB1Q9ULX3 412 aaKnown RBP17.22■□□□□ 0.35
COL1A1-208ENST00000494334 SLC4A10Q6U841 1118 aa17.21■□□□□ 0.35
COL1A1-208ENST00000494334 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
COL1A1-208ENST00000494334 H7C1W4 665 aa17.2■□□□□ 0.34
COL1A1-208ENST00000494334 BCAR3O75815 825 aa17.2■□□□□ 0.34
COL1A1-208ENST00000494334 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
COL1A1-208ENST00000494334 HOXA10P31260 410 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-208ENST00000494334 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
COL1A1-208ENST00000494334 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
COL1A1-208ENST00000494334 BRCA1P38398 1863 aaKnown RBP17.2■□□□□ 0.34
COL1A1-208ENST00000494334 COL11A2P13942 1736 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-208ENST00000494334 SF3B3Q15393 1217 aaKnown RBP17.19■□□□□ 0.34
COL1A1-208ENST00000494334 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
COL1A1-208ENST00000494334 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
COL1A1-208ENST00000494334 SRCIN1Q9C0H9 1055 aa17.19■□□□□ 0.34
COL1A1-208ENST00000494334 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
COL1A1-208ENST00000494334 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
COL1A1-208ENST00000494334 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
COL1A1-208ENST00000494334 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-208ENST00000494334 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 C21orf2O43822 256 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 PDE8AO60658 829 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 HSP90B1P14625 803 aaKnown RBP17.17■□□□□ 0.34
COL1A1-208ENST00000494334 CASP7P55210 303 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 ARHGAP27Q6ZUM4 889 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 API5Q9BZZ5 524 aaKnown RBP17.17■□□□□ 0.34
COL1A1-208ENST00000494334 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
COL1A1-208ENST00000494334 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
COL1A1-208ENST00000494334 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-208ENST00000494334 ABCC4O15439 1325 aa17.15■□□□□ 0.34
COL1A1-208ENST00000494334 GRM8O00222 908 aa17.14■□□□□ 0.33
COL1A1-208ENST00000494334 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
COL1A1-208ENST00000494334 PLA2G12BQ9BX93 195 aa17.14■□□□□ 0.33
COL1A1-208ENST00000494334 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-208ENST00000494334 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
COL1A1-208ENST00000494334 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
COL1A1-208ENST00000494334 CTSWP56202 376 aa17.13■□□□□ 0.33
COL1A1-208ENST00000494334 GRAPQ13588 217 aa17.13■□□□□ 0.33
COL1A1-208ENST00000494334 OLFM4Q6UX06 510 aa17.13■□□□□ 0.33
COL1A1-208ENST00000494334 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
COL1A1-208ENST00000494334 TTLL11Q8NHH1 800 aa17.13■□□□□ 0.33
COL1A1-208ENST00000494334 GRAPLQ8TC17 118 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-208ENST00000494334 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms