RNA–Protein interactions for RNA: ENST00000494174.5

NECAB3-215, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 859 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-215ENST00000494174 FAM177BA6PVY3 158 aa25.33■■□□□ 1.65
NECAB3-215ENST00000494174 HOXA10P31260 410 aaPredicted RBP25.33■■□□□ 1.65
NECAB3-215ENST00000494174 TWISTNBQ3B726 338 aaPredicted RBP25.33■■□□□ 1.65
NECAB3-215ENST00000494174 PRPF40BQ6NWY9 871 aaKnown RBP25.33■■□□□ 1.65
NECAB3-215ENST00000494174 LTBP3Q9NS15 1303 aa25.33■■□□□ 1.64
NECAB3-215ENST00000494174 SENP3-EIF4A1A0A087X0R7 540 aa25.32■■□□□ 1.64
NECAB3-215ENST00000494174 SOGA3Q5TF21 947 aa25.32■■□□□ 1.64
NECAB3-215ENST00000494174 CACNA1FO60840 1977 aa25.32■■□□□ 1.64
NECAB3-215ENST00000494174 ZC3H4Q9UPT8 1303 aaKnown RBP25.32■■□□□ 1.64
NECAB3-215ENST00000494174 NFKBIEO00221 500 aa25.31■■□□□ 1.64
NECAB3-215ENST00000494174 PHAXQ9H814 394 aaKnown RBP25.31■■□□□ 1.64
NECAB3-215ENST00000494174 SPINK5Q9NQ38 1064 aaPredicted RBP25.31■■□□□ 1.64
NECAB3-215ENST00000494174 ALDH1B1P30837 517 aa25.3■■□□□ 1.64
NECAB3-215ENST00000494174 C9orf131Q5VYM1 1079 aa25.3■■□□□ 1.64
NECAB3-215ENST00000494174 GOLGA2Q08379 1002 aa25.29■■□□□ 1.64
NECAB3-215ENST00000494174 MYH16Q9H6N6 1097 aa25.29■■□□□ 1.64
NECAB3-215ENST00000494174 SALL2Q9Y467 1007 aaPredicted RBP25.29■■□□□ 1.64
NECAB3-215ENST00000494174 CACNA1SQ13698 1873 aa25.29■■□□□ 1.64
NECAB3-215ENST00000494174 SNED1Q8TER0 1413 aa25.29■■□□□ 1.64
NECAB3-215ENST00000494174 C21orf2O43822 256 aa25.28■■□□□ 1.64
NECAB3-215ENST00000494174 LMNB1P20700 586 aa25.28■■□□□ 1.64
NECAB3-215ENST00000494174 VAMP4O75379 141 aa25.27■■□□□ 1.64
NECAB3-215ENST00000494174 PRELPP51888 382 aa25.27■■□□□ 1.64
NECAB3-215ENST00000494174 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
NECAB3-215ENST00000494174 STK31Q9BXU1 1019 aa25.27■■□□□ 1.64
NECAB3-215ENST00000494174 SH3TC1Q8TE82 1336 aa25.27■■□□□ 1.64
NECAB3-215ENST00000494174 DDX58O95786 925 aaKnown RBP25.26■■□□□ 1.63
NECAB3-215ENST00000494174 RASSF7Q02833 373 aa25.26■■□□□ 1.63
NECAB3-215ENST00000494174 NLRP3Q96P20 1036 aa25.26■■□□□ 1.63
NECAB3-215ENST00000494174 C3orf67Q6ZVT6 689 aa25.25■■□□□ 1.63
NECAB3-215ENST00000494174 RIC3Q7Z5B4 369 aa25.25■■□□□ 1.63
NECAB3-215ENST00000494174 RNF181Q9P0P0 153 aa25.25■■□□□ 1.63
NECAB3-215ENST00000494174 TRMT112Q9UI30 125 aaKnown RBP25.25■■□□□ 1.63
NECAB3-215ENST00000494174 LAMB2P55268 1798 aa25.25■■□□□ 1.63
NECAB3-215ENST00000494174 DICER1Q9UPY3 1922 aaKnown RBP25.25■■□□□ 1.63
NECAB3-215ENST00000494174 DDX60Q8IY21 1712 aaKnown RBP25.24■■□□□ 1.63
NECAB3-215ENST00000494174 EXOSC9Q06265 439 aaKnown RBP25.24■■□□□ 1.63
NECAB3-215ENST00000494174 CCDC93Q567U6 631 aa25.24■■□□□ 1.63
NECAB3-215ENST00000494174 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
NECAB3-215ENST00000494174 RPGRQ92834 1020 aaKnown RBP25.23■■□□□ 1.63
NECAB3-215ENST00000494174 METTL22Q9BUU2 404 aaPredicted RBP25.23■■□□□ 1.63
NECAB3-215ENST00000494174 CC2D2BQ6DHV5 1058 aa25.22■■□□□ 1.63
NECAB3-215ENST00000494174 CCDC191Q8NCU4 936 aa25.22■■□□□ 1.63
NECAB3-215ENST00000494174 RBM17Q96I25 401 aaKnown RBP25.22■■□□□ 1.63
NECAB3-215ENST00000494174 TAOK3Q9H2K8 898 aa25.22■■□□□ 1.63
NECAB3-215ENST00000494174 GPBP1L1Q9HC44 474 aaPredicted RBP25.22■■□□□ 1.63
NECAB3-215ENST00000494174 CCDC88AQ3V6T2 1871 aa25.21■■□□□ 1.63
NECAB3-215ENST00000494174 ATP5J2-PTCD1G3V325 749 aa25.21■■□□□ 1.63
NECAB3-215ENST00000494174 SLC4A2P04920 1241 aa25.21■■□□□ 1.63
NECAB3-215ENST00000494174 GRIPAP1Q4V328 841 aa25.21■■□□□ 1.63
NECAB3-215ENST00000494174 TIAM2Q8IVF5 1701 aa25.2■■□□□ 1.63
NECAB3-215ENST00000494174 RTKN2Q8IZC4 609 aa25.2■■□□□ 1.62
NECAB3-215ENST00000494174 SYNE4Q8N205 404 aa25.2■■□□□ 1.62
NECAB3-215ENST00000494174 E9PSI1 815 aa25.19■■□□□ 1.62
NECAB3-215ENST00000494174 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
NECAB3-215ENST00000494174 ZBTB38Q8NAP3 1195 aaPredicted RBP25.19■■□□□ 1.62
NECAB3-215ENST00000494174 PI4KAP2A4QPH2 592 aa25.18■■□□□ 1.62
NECAB3-215ENST00000494174 HCLS1P14317 486 aaPredicted RBP25.18■■□□□ 1.62
NECAB3-215ENST00000494174 FKBP4Q02790 459 aaKnown RBP eCLIP25.18■■□□□ 1.621e-6■■■■■ 28.9
NECAB3-215ENST00000494174 FLIIQ13045 1269 aa25.18■■□□□ 1.62
NECAB3-215ENST00000494174 SF3B3Q15393 1217 aaKnown RBP25.18■■□□□ 1.62
NECAB3-215ENST00000494174 G2E3Q7L622 706 aa25.18■■□□□ 1.62
NECAB3-215ENST00000494174 PI4KAP1Q8N8J0 262 aa25.18■■□□□ 1.62
NECAB3-215ENST00000494174 MYD88Q99836 296 aa25.18■■□□□ 1.62
NECAB3-215ENST00000494174 MAP3K2Q9Y2U5 619 aa25.18■■□□□ 1.62
NECAB3-215ENST00000494174 PCCAP05165 728 aaPredicted RBP25.17■■□□□ 1.62
NECAB3-215ENST00000494174 FAM89AQ96GI7 184 aa25.17■■□□□ 1.62
NECAB3-215ENST00000494174 PSMD1Q99460 953 aa25.17■■□□□ 1.62
NECAB3-215ENST00000494174 ZNF219Q9P2Y4 722 aaPredicted RBP25.17■■□□□ 1.62
NECAB3-215ENST00000494174 ABCC4O15439 1325 aa25.16■■□□□ 1.62
NECAB3-215ENST00000494174 HSP90B1P14625 803 aaKnown RBP25.16■■□□□ 1.62
NECAB3-215ENST00000494174 CWC25Q9NXE8 425 aaPredicted RBP25.16■■□□□ 1.62
NECAB3-215ENST00000494174 KIF3CO14782 793 aa25.15■■□□□ 1.62
NECAB3-215ENST00000494174 IGKV5-2P06315 115 aa25.15■■□□□ 1.62
NECAB3-215ENST00000494174 SLFN5Q08AF3 891 aa25.15■■□□□ 1.62
NECAB3-215ENST00000494174 TRMT2AQ8IZ69 625 aaKnown RBP25.15■■□□□ 1.62
NECAB3-215ENST00000494174 TCERG1O14776 1098 aaKnown RBP25.14■■□□□ 1.62
NECAB3-215ENST00000494174 PPEF1O14829 653 aaPredicted RBP25.14■■□□□ 1.62
NECAB3-215ENST00000494174 BBOX1O75936 387 aa25.14■■□□□ 1.62
NECAB3-215ENST00000494174 KDM2BQ8NHM5 1336 aa25.13■■□□□ 1.61
NECAB3-215ENST00000494174 CDHR2Q9BYE9 1310 aa25.13■■□□□ 1.61
NECAB3-215ENST00000494174 IRS4O14654 1257 aaPredicted RBP25.13■■□□□ 1.61
NECAB3-215ENST00000494174 OLFM4Q6UX06 510 aa25.13■■□□□ 1.61
NECAB3-215ENST00000494174 TMC4Q7Z404 712 aa25.13■■□□□ 1.61
NECAB3-215ENST00000494174 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
NECAB3-215ENST00000494174 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
NECAB3-215ENST00000494174 GLTPD2A6NH11 291 aa25.12■■□□□ 1.61
NECAB3-215ENST00000494174 C1QTNF8P60827 252 aa25.12■■□□□ 1.61
NECAB3-215ENST00000494174 NEXNQ0ZGT2 675 aa25.12■■□□□ 1.61
NECAB3-215ENST00000494174 GRAPQ13588 217 aa25.12■■□□□ 1.61
NECAB3-215ENST00000494174 GRAPLQ8TC17 118 aaPredicted RBP25.12■■□□□ 1.61
NECAB3-215ENST00000494174 ZNF526Q8TF50 670 aaPredicted RBP25.12■■□□□ 1.61
NECAB3-215ENST00000494174 NEURL1BA8MQ27 555 aa25.11■■□□□ 1.61
NECAB3-215ENST00000494174 DDX46Q7L014 1031 aaKnown RBP25.11■■□□□ 1.61
NECAB3-215ENST00000494174 ZNF428Q96B54 188 aa25.11■■□□□ 1.61
NECAB3-215ENST00000494174 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
NECAB3-215ENST00000494174 MIER1Q8N108 512 aa25.1■■□□□ 1.61
NECAB3-215ENST00000494174 DNAAF4Q8WXU2 420 aa25.1■■□□□ 1.61
NECAB3-215ENST00000494174 FKBP5Q13451 457 aaPredicted RBP25.09■■□□□ 1.61
NECAB3-215ENST00000494174 RTFDC1Q9BY42 306 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms