RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LAMB2P55268 1798 aa14.14□□□□□ -0.15
CPSF7-212ENST00000489728 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
CPSF7-212ENST00000489728 A0A0G2JLW4 131 aa14.14□□□□□ -0.15
CPSF7-212ENST00000489728 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
CPSF7-212ENST00000489728 BRPF1P55201 1214 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-212ENST00000489728 FKBP5Q13451 457 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-212ENST00000489728 SLC10A5Q5PT55 438 aa14.14□□□□□ -0.15
CPSF7-212ENST00000489728 MAP3K2Q9Y2U5 619 aa14.14□□□□□ -0.15
CPSF7-212ENST00000489728 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
CPSF7-212ENST00000489728 TCERG1O14776 1098 aaKnown RBP14.13□□□□□ -0.15
CPSF7-212ENST00000489728 SRGNP10124 158 aa14.13□□□□□ -0.15
CPSF7-212ENST00000489728 GPR162Q16538 588 aa14.13□□□□□ -0.15
CPSF7-212ENST00000489728 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
CPSF7-212ENST00000489728 STYK1Q6J9G0 422 aa14.13□□□□□ -0.15
CPSF7-212ENST00000489728 G2E3Q7L622 706 aa14.13□□□□□ -0.15
CPSF7-212ENST00000489728 C2CD5Q86YS7 1000 aa14.13□□□□□ -0.15
CPSF7-212ENST00000489728 TNRC6CQ9HCJ0 1690 aaKnown RBP14.13□□□□□ -0.15
CPSF7-212ENST00000489728 ERFEQ4G0M1 354 aa14.12□□□□□ -0.15
CPSF7-212ENST00000489728 DALRD3Q5D0E6 543 aaKnown RBP14.12□□□□□ -0.15
CPSF7-212ENST00000489728 MRPL50Q8N5N7 158 aaKnown RBP14.12□□□□□ -0.15
CPSF7-212ENST00000489728 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
CPSF7-212ENST00000489728 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
CPSF7-212ENST00000489728 MYD88Q99836 296 aa14.12□□□□□ -0.15
CPSF7-212ENST00000489728 CWC25Q9NXE8 425 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-212ENST00000489728 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
CPSF7-212ENST00000489728 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
CPSF7-212ENST00000489728 FAM177BA6PVY3 158 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 NPR1P16066 1061 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 CHRNA5P30532 468 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 TTLL6Q8N841 843 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 ZBTB38Q8NAP3 1195 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-212ENST00000489728 LINS1Q8NG48 757 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 CNKSR1Q969H4 720 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 MASTLQ96GX5 879 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 SMC4Q9NTJ3 1288 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 KIF16BQ96L93 1317 aa14.11□□□□□ -0.15
CPSF7-212ENST00000489728 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
CPSF7-212ENST00000489728 ATP5J2-PTCD1G3V325 749 aa14.1□□□□□ -0.15
CPSF7-212ENST00000489728 PCCAP05165 728 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-212ENST00000489728 YBX3P16989 372 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■□□□ 12.8
CPSF7-212ENST00000489728 NLRP3Q96P20 1036 aa14.1□□□□□ -0.15
CPSF7-212ENST00000489728 NEURL1BA8MQ27 555 aa14.09□□□□□ -0.15
CPSF7-212ENST00000489728 IGKV5-2P06315 115 aa14.09□□□□□ -0.15
CPSF7-212ENST00000489728 HOXA10P31260 410 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-212ENST00000489728 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
CPSF7-212ENST00000489728 CCDC24Q8N4L8 307 aa14.09□□□□□ -0.15
CPSF7-212ENST00000489728 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
CPSF7-212ENST00000489728 CDHR2Q9BYE9 1310 aa14.09□□□□□ -0.15
CPSF7-212ENST00000489728 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
CPSF7-212ENST00000489728 SOGA3Q5TF21 947 aa14.08□□□□□ -0.16
CPSF7-212ENST00000489728 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
CPSF7-212ENST00000489728 ALDH1L1O75891 902 aa14.07□□□□□ -0.16
CPSF7-212ENST00000489728 BEND3Q5T5X7 828 aa14.07□□□□□ -0.16
CPSF7-212ENST00000489728 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
CPSF7-212ENST00000489728 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
CPSF7-212ENST00000489728 ZNF622Q969S3 477 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■□□□□ 9.3
CPSF7-212ENST00000489728 FAM89AQ96GI7 184 aa14.07□□□□□ -0.16
CPSF7-212ENST00000489728 CRAMP1Q96RY5 1269 aa14.07□□□□□ -0.16
CPSF7-212ENST00000489728 CHD4Q14839 1912 aa14.07□□□□□ -0.16
CPSF7-212ENST00000489728 IRS4O14654 1257 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-212ENST00000489728 GCKRQ14397 625 aa14.06□□□□□ -0.16
CPSF7-212ENST00000489728 SF3B3Q15393 1217 aaKnown RBP14.06□□□□□ -0.16
CPSF7-212ENST00000489728 PRPF40BQ6NWY9 871 aaKnown RBP14.06□□□□□ -0.16
CPSF7-212ENST00000489728 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
CPSF7-212ENST00000489728 API5Q9BZZ5 524 aaKnown RBP14.06□□□□□ -0.16
CPSF7-212ENST00000489728 F6X3S4 739 aa14.05□□□□□ -0.16
CPSF7-212ENST00000489728 H7C1W4 665 aa14.05□□□□□ -0.16
CPSF7-212ENST00000489728 CWF19L2Q2TBE0 894 aaKnown RBP14.05□□□□□ -0.16
CPSF7-212ENST00000489728 GRIPAP1Q4V328 841 aa14.05□□□□□ -0.16
CPSF7-212ENST00000489728 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
CPSF7-212ENST00000489728 SRCIN1Q9C0H9 1055 aa14.05□□□□□ -0.16
CPSF7-212ENST00000489728 SLX4Q8IY92 1834 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 CACNA1SQ13698 1873 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 MYH3P11055 1940 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 IPO8O15397 1037 aaKnown RBP14.04□□□□□ -0.16
CPSF7-212ENST00000489728 PDE8AO60658 829 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 HCLS1P14317 486 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-212ENST00000489728 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 TMC4Q7Z404 712 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 PLA2G12BQ9BX93 195 aa14.04□□□□□ -0.16
CPSF7-212ENST00000489728 UTRNP46939 3433 aa14.03□□□□□ -0.16
CPSF7-212ENST00000489728 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
CPSF7-212ENST00000489728 DDX46Q7L014 1031 aaKnown RBP14.03□□□□□ -0.16
CPSF7-212ENST00000489728 SYNE4Q8N205 404 aa14.03□□□□□ -0.16
CPSF7-212ENST00000489728 C7orf43Q8WVR3 580 aa14.03□□□□□ -0.16
CPSF7-212ENST00000489728 LTBP3Q9NS15 1303 aa14.03□□□□□ -0.16
CPSF7-212ENST00000489728 RTL9Q8NET4 1388 aa14.03□□□□□ -0.16
CPSF7-212ENST00000489728 FER1L6Q2WGJ9 1857 aa14.02□□□□□ -0.16
CPSF7-212ENST00000489728 UTYO14607 1347 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 GRM8O00222 908 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 BBOX1O75936 387 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 CCT4P50991 539 aaKnown RBP14.02□□□□□ -0.17
CPSF7-212ENST00000489728 CASP7P55210 303 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 CCDC152Q4G0S7 254 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 SLC4A10Q6U841 1118 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 UBE3BQ7Z3V4 1068 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
CPSF7-212ENST00000489728 NOB1Q9ULX3 412 aaKnown RBP14.02□□□□□ -0.17
CPSF7-212ENST00000489728 LRRC37AA6NMS7 1700 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms