RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CHST3Q7LGC8 479 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 FAM200AQ8TCP9 573 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 CLIP2Q9UDT6 1046 aa14.7□□□□□ -0.06
HSPG2-211ENST00000486901 DNAAF4Q8WXU2 420 aa14.69□□□□□ -0.06
HSPG2-211ENST00000486901 SEC62Q99442 399 aaKnown RBP14.69□□□□□ -0.06
HSPG2-211ENST00000486901 ST7Q9NRC1 585 aa14.69□□□□□ -0.06
HSPG2-211ENST00000486901 GOLGA6L6A8MZA4 724 aa14.69□□□□□ -0.06
HSPG2-211ENST00000486901 ZNF589Q86UQ0 364 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-211ENST00000486901 ABTB2Q8N961 1025 aa14.69□□□□□ -0.06
HSPG2-211ENST00000486901 NCBP1Q09161 790 aaKnown RBP14.69□□□□□ -0.06
HSPG2-211ENST00000486901 SPTLC3Q9NUV7 552 aa14.69□□□□□ -0.06
HSPG2-211ENST00000486901 MAP3K2Q9Y2U5 619 aa14.69□□□□□ -0.06
HSPG2-211ENST00000486901 DNAJC2Q99543 621 aaKnown RBP14.68□□□□□ -0.06
HSPG2-211ENST00000486901 H3BQV1 296 aa14.68□□□□□ -0.06
HSPG2-211ENST00000486901 LETM1O95202 739 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-211ENST00000486901 MYL6BP14649 208 aa14.68□□□□□ -0.06
HSPG2-211ENST00000486901 CCT2P78371 535 aaKnown RBP14.68□□□□□ -0.06
HSPG2-211ENST00000486901 GORABQ5T7V8 394 aa14.68□□□□□ -0.06
HSPG2-211ENST00000486901 IFFO2Q5TF58 517 aa14.68□□□□□ -0.06
HSPG2-211ENST00000486901 BLOC1S2Q6QNY1 142 aa14.68□□□□□ -0.06
HSPG2-211ENST00000486901 GLRX3O76003 335 aaKnown RBP14.67□□□□□ -0.06
HSPG2-211ENST00000486901 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
HSPG2-211ENST00000486901 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
HSPG2-211ENST00000486901 ZSCAN25Q6NSZ9 544 aa14.67□□□□□ -0.06
HSPG2-211ENST00000486901 TMEM87AQ8NBN3 555 aa14.67□□□□□ -0.06
HSPG2-211ENST00000486901 PGBD1Q96JS3 809 aa14.67□□□□□ -0.06
HSPG2-211ENST00000486901 SLC27A2O14975 620 aa14.66□□□□□ -0.06
HSPG2-211ENST00000486901 TEFQ10587 303 aa14.66□□□□□ -0.06
HSPG2-211ENST00000486901 C11orf57Q6ZUT1 292 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-211ENST00000486901 CCDC112Q8NEF3 446 aa14.66□□□□□ -0.06
HSPG2-211ENST00000486901 BRF1Q92994 677 aa14.66□□□□□ -0.06
HSPG2-211ENST00000486901 ZNF330Q9Y3S2 320 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-211ENST00000486901 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
HSPG2-211ENST00000486901 BIN1O00499 593 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 LTKP29376 864 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-211ENST00000486901 RUFY2Q8WXA3 655 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 TMX1Q9H3N1 280 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 CDC42BPGQ6DT37 1551 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 TMEM131LA2VDJ0 1609 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 BEND3Q5T5X7 828 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 OTUD7BQ6GQQ9 843 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 STK11IPQ8N1F8 1099 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 NCOA5Q9HCD5 579 aaKnown RBP14.65□□□□□ -0.06
HSPG2-211ENST00000486901 GOLGA6L19H0YKK7 550 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 VPS53Q5VIR6 699 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 ANKRD26Q9UPS8 1709 aa14.65□□□□□ -0.06
HSPG2-211ENST00000486901 A0A0G2JLW4 131 aa14.64□□□□□ -0.07
HSPG2-211ENST00000486901 ZNF75DP51815 510 aa14.64□□□□□ -0.07
HSPG2-211ENST00000486901 CEP170BQ9Y4F5 1589 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-211ENST00000486901 BTBD11A6QL63 1104 aa14.64□□□□□ -0.07
HSPG2-211ENST00000486901 BECN2A8MW95 431 aa14.64□□□□□ -0.07
HSPG2-211ENST00000486901 ZNF215Q9UL58 517 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-211ENST00000486901 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
HSPG2-211ENST00000486901 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
HSPG2-211ENST00000486901 HOXC9P31274 260 aa14.63□□□□□ -0.07
HSPG2-211ENST00000486901 G3BP1Q13283 466 aaKnown RBP eCLIP14.63□□□□□ -0.07
HSPG2-211ENST00000486901 POLA2Q14181 598 aa14.63□□□□□ -0.07
HSPG2-211ENST00000486901 HSP90AA4PQ58FG1 418 aa14.63□□□□□ -0.07
HSPG2-211ENST00000486901 BICC1Q9H694 974 aaKnown RBP14.63□□□□□ -0.07
HSPG2-211ENST00000486901 GTF2F1P35269 517 aaKnown RBP eCLIP14.63□□□□□ -0.07
HSPG2-211ENST00000486901 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
HSPG2-211ENST00000486901 AMOTL2Q9Y2J4 779 aa14.63□□□□□ -0.07
HSPG2-211ENST00000486901 FAM177A1Q8N128 213 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-211ENST00000486901 SUCLG2Q96I99 432 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 A2ML1A8K2U0 1454 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 DIP2CQ9Y2E4 1556 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 VGLL3A8MV65 326 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 SASH1O94885 1247 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 ELF2Q15723 593 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 NBPF6Q5VWK0 638 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 NBPF4Q96M43 638 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 TOB2Q14106 344 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-211ENST00000486901 CEP135Q66GS9 1140 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
HSPG2-211ENST00000486901 SKILP12757 684 aa14.61□□□□□ -0.07
HSPG2-211ENST00000486901 ZNF530Q6P9A1 599 aaPredicted RBP14.61□□□□□ -0.07
HSPG2-211ENST00000486901 Q6ZUG5 572 aa14.61□□□□□ -0.07
HSPG2-211ENST00000486901 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
HSPG2-211ENST00000486901 LRRN4CLQ8ND94 238 aa14.61□□□□□ -0.07
HSPG2-211ENST00000486901 SSH2Q76I76 1423 aa14.61□□□□□ -0.07
HSPG2-211ENST00000486901 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
HSPG2-211ENST00000486901 GPATCH3Q96I76 525 aa14.6□□□□□ -0.07
HSPG2-211ENST00000486901 SH2B1Q9NRF2 756 aaPredicted RBP14.6□□□□□ -0.07
HSPG2-211ENST00000486901 GOLGA8FQ08AF8 430 aa14.6□□□□□ -0.07
HSPG2-211ENST00000486901 GOLGA8DPQ0D2H9 430 aa14.6□□□□□ -0.07
HSPG2-211ENST00000486901 ZSCAN31Q96LW9 406 aaPredicted RBP14.6□□□□□ -0.07
HSPG2-211ENST00000486901 FLT4P35916 1363 aa14.6□□□□□ -0.07
HSPG2-211ENST00000486901 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
HSPG2-211ENST00000486901 ME1P48163 572 aa14.6□□□□□ -0.07
HSPG2-211ENST00000486901 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
HSPG2-211ENST00000486901 EID1Q9Y6B2 187 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 APOBRQ0VD83 1088 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 AOPEPQ8N6M6 819 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 ANKRD7Q92527 254 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
HSPG2-211ENST00000486901 GPHNQ9NQX3 736 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-211ENST00000486901 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms