RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 RBM8AQ9Y5S9 174 aaKnown RBP18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 AK7Q96M32 723 aa18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 SYCE3A1L190 88 aa18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 RBM5P52756 815 aaKnown RBP eCLIP18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 USP5P45974 858 aa18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 C8orf37Q96NL8 207 aa18.23■□□□□ 0.51
PPFIA4-205ENST00000486360 ZFYP08048 801 aaPredicted RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 HAND2P61296 217 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 CCDC43Q96MW1 224 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 ABCC4O15439 1325 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 BAG4O95429 457 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 C8orf76Q96K31 380 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 FAM13BQ9NYF5 915 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 CCDC196A0A1B0GTZ2 297 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 STX6O43752 255 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 SMC2O95347 1197 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 CCT2P78371 535 aaKnown RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 SOGA3Q5TF21 947 aa18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
PPFIA4-205ENST00000486360 GOLGA8BA8MQT2 603 aa18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 GJB2P29033 226 aa18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 CHMLP26374 656 aa18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 NBPF5PQ86XG9 351 aaPredicted RBP18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 NIP7Q9Y221 180 aaKnown RBP eCLIP18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 LMTK3Q96Q04 1460 aa18.21■□□□□ 0.51
PPFIA4-205ENST00000486360 IFIT3O14879 490 aaKnown RBP18.21■□□□□ 0.5
PPFIA4-205ENST00000486360 ZSCAN29Q8IWY8 852 aaPredicted RBP18.21■□□□□ 0.5
PPFIA4-205ENST00000486360 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.5
PPFIA4-205ENST00000486360 RFC4P35249 363 aa18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 MAP3K11Q16584 847 aa18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 IQCA1Q86XH1 822 aa18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 GUCY1B3Q02153 619 aa18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 NPHP4O75161 1426 aaPredicted RBP18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 RANBP6O60518 1105 aaKnown RBP18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
PPFIA4-205ENST00000486360 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 CDK5RAP3Q96JB5 506 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 TFCP2Q12800 502 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 TMEM94Q12767 1356 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 POLR3DP05423 398 aaPredicted RBP18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 PDILTQ8N807 584 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 PIBF1Q8WXW3 757 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 TCEANC2Q96MN5 208 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 E9PCH4 1651 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 SPC24Q8NBT2 197 aa18.19■□□□□ 0.5
PPFIA4-205ENST00000486360 KIF24Q5T7B8 1368 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 ANKRD18AQ8IVF6 992 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 BRF1Q92994 677 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 MADDQ8WXG6 1647 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 CEP57L1Q8IYX8 460 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 NCOA7Q8NI08 942 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 CEP89Q96ST8 783 aa18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 UTP14AQ9BVJ6 771 aaKnown RBP18.18■□□□□ 0.5
PPFIA4-205ENST00000486360 CCDC82Q8N4S0 544 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 USP26Q9BXU7 913 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 CTCFLQ8NI51 663 aaPredicted RBP18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 KCNQ3O43525 872 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 A1BGP04217 495 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 CCDC183Q5T5S1 534 aa18.17■□□□□ 0.5
PPFIA4-205ENST00000486360 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 ARHGEF25Q86VW2 580 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 ADGRB3O60242 1522 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 FILIP1LQ4L180 1135 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 MPNDQ8N594 471 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 CDCA7Q9BWT1 371 aaPredicted RBP18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 GLI2P10070 1586 aa18.16■□□□□ 0.5
PPFIA4-205ENST00000486360 CAMK4Q16566 473 aa18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 LMTK2Q8IWU2 1503 aa18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 MCM5P33992 734 aa18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 TFIP11Q9UBB9 837 aaKnown RBP18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 TMEM67Q5HYA8 995 aa18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 CCDC191Q8NCU4 936 aa18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 DACH1Q9UI36 760 aa18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 CDK12Q9NYV4 1490 aaPredicted RBP18.15■□□□□ 0.5
PPFIA4-205ENST00000486360 SERPINC1P01008 464 aa18.14■□□□□ 0.49
PPFIA4-205ENST00000486360 PHKG2P15735 406 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms