RNA–Protein interactions for RNA: ENST00000483966.3

HNRNPU-210, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-210ENST00000483966 TNFRSF25Q93038 417 aa6.88□□□□□ -1.31
HNRNPU-210ENST00000483966 TRIM11Q96F44 468 aa6.88□□□□□ -1.31
HNRNPU-210ENST00000483966 EFCC1Q9HA90 598 aa6.88□□□□□ -1.31
HNRNPU-210ENST00000483966 ZNF358Q9NW07 568 aa6.88□□□□□ -1.31
HNRNPU-210ENST00000483966 ZNF232Q9UNY5 417 aa6.88□□□□□ -1.31
HNRNPU-210ENST00000483966 ZNF608Q9ULD9 1512 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 FANCD2Q9BXW9 1451 aa6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 NCOA4Q13772 614 aa6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 KANK4Q5T7N3 995 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 C1orf53Q5VUE5 145 aa6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 VRTNQ9H8Y1 702 aa6.87□□□□□ -1.31
HNRNPU-210ENST00000483966 TMEM88BA6NKF7 163 aa6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 HIRAP54198 1017 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 PSMA6P60900 246 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 SLC9A9Q8IVB4 645 aa6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 RHPN1Q8TCX5 695 aa6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 MDFIQ99750 246 aa6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 SMARCA4P51532 1647 aa6.86□□□□□ -1.31
HNRNPU-210ENST00000483966 USP17L5A8MUK1 530 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 M0R2N6 131 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 TXLNAP40222 546 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 EPHA4P54764 986 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 ILDR2Q71H61 639 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 KRTAP9-2Q9BYQ4 174 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 SEMA6BQ9H3T3 888 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 RBM19Q9Y4C8 960 aaKnown RBP6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 USP3Q9Y6I4 520 aa6.85□□□□□ -1.31
HNRNPU-210ENST00000483966 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 KCNQ4P56696 695 aa6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 ZDHHC1Q8WTX9 485 aa6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 PARP3Q9Y6F1 533 aa6.84□□□□□ -1.31
HNRNPU-210ENST00000483966 URB2Q14146 1524 aaKnown RBP6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 M0R082 166 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 RANGAP1P46060 587 aaPredicted RBP6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 DOC2BQ14184 412 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 NPM2Q86SE8 214 aaKnown RBP6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 ZNF417Q8TAU3 575 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 ZNF587Q96SQ5 575 aaPredicted RBP6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 BRD7Q9NPI1 651 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 HCN2Q9UL51 889 aa6.83□□□□□ -1.32
HNRNPU-210ENST00000483966 FAM196BA6NMK8 535 aa6.82□□□□□ -1.32
HNRNPU-210ENST00000483966 ADH7P40394 386 aa6.82□□□□□ -1.32
HNRNPU-210ENST00000483966 CDCA8Q53HL2 280 aa6.82□□□□□ -1.32
HNRNPU-210ENST00000483966 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
HNRNPU-210ENST00000483966 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
HNRNPU-210ENST00000483966 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 C9orf172C9J069 976 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 CCDC102BQ68D86 513 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 POTEAQ6S8J7 498 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 GAS2L2Q8NHY3 880 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 CEP63Q96MT8 703 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 KCNH4Q9UQ05 1017 aa6.81□□□□□ -1.32
HNRNPU-210ENST00000483966 IFT140Q96RY7 1462 aa6.8□□□□□ -1.32
HNRNPU-210ENST00000483966 LILRB5O75023 590 aa6.8□□□□□ -1.32
HNRNPU-210ENST00000483966 MICALL1Q8N3F8 863 aa6.8□□□□□ -1.32
HNRNPU-210ENST00000483966 STAG2Q8N3U4 1231 aa6.8□□□□□ -1.32
HNRNPU-210ENST00000483966 TPCN2Q8NHX9 752 aa6.8□□□□□ -1.32
HNRNPU-210ENST00000483966 GNEQ9Y223 722 aaKnown RBP6.8□□□□□ -1.32
HNRNPU-210ENST00000483966 NRG1Q02297 640 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 SFSWAPQ12872 951 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 PCSK7Q16549 785 aa6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 TNS4Q8IZW8 715 aa6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 RGS22Q8NE09 1264 aa6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 C7orf43Q8WVR3 580 aa6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 MKRN1Q9UHC7 482 aaKnown RBP6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
HNRNPU-210ENST00000483966 SCO2A0A1W2PP80 73 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 ELNP15502 786 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 RAC1P63000 192 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 SIX5Q8N196 739 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 PHACTR1Q9C0D0 580 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 NOVA2Q9UNW9 492 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 PEG3Q9GZU2 1588 aa6.78□□□□□ -1.32
HNRNPU-210ENST00000483966 CARNS1A5YM72 827 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L10C9JJH3 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L12C9JPN9 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L21D6R901 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
HNRNPU-210ENST00000483966 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms