RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 EDEM1Q92611 657 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 CRELD1Q96HD1 420 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 NGLY1Q96IV0 654 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 FRMD6Q96NE9 622 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 CSRNP1Q96S65 589 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 RAB6BQ9NRW1 208 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 IQSEC3Q9UPP2 1182 aaPredicted RBP7.87□□□□□ -1.15
COPA-203ENST00000481040 USP3Q9Y6I4 520 aa7.87□□□□□ -1.15
COPA-203ENST00000481040 CDK2AP1O14519 115 aa7.86□□□□□ -1.15
COPA-203ENST00000481040 PPFIA3O75145 1194 aa7.86□□□□□ -1.15
COPA-203ENST00000481040 CTSHP09668 335 aa7.86□□□□□ -1.15
COPA-203ENST00000481040 Q6ZVU0 165 aa7.86□□□□□ -1.15
COPA-203ENST00000481040 ETFBKMTQ8IXQ9 262 aa7.86□□□□□ -1.15
COPA-203ENST00000481040 XAGE2Q96GT9 111 aa7.86□□□□□ -1.15
COPA-203ENST00000481040 HIRIP3Q9BW71 556 aaPredicted RBP7.86□□□□□ -1.15
COPA-203ENST00000481040 EML1O00423 815 aa7.85□□□□□ -1.15
COPA-203ENST00000481040 ZAP70P43403 619 aa7.85□□□□□ -1.15
COPA-203ENST00000481040 C11orf91Q3C1V1 193 aa7.85□□□□□ -1.15
COPA-203ENST00000481040 CCDC144BQ3MJ40 725 aa7.85□□□□□ -1.15
COPA-203ENST00000481040 ANKRD13AQ8IZ07 590 aa7.85□□□□□ -1.15
COPA-203ENST00000481040 INPP5FQ9Y2H2 1132 aa7.85□□□□□ -1.15
COPA-203ENST00000481040 SERTM1A2A2V5 107 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 IL2RAP01589 272 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
COPA-203ENST00000481040 HIRAP54198 1017 aaPredicted RBP7.84□□□□□ -1.15
COPA-203ENST00000481040 ARID5AQ03989 594 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 DGKZQ13574 1117 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 TLR1Q15399 786 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 ZNF654Q8IZM8 581 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
COPA-203ENST00000481040 ARHGEF10LQ9HCE6 1279 aa7.84□□□□□ -1.15
COPA-203ENST00000481040 DDX41Q9UJV9 622 aaKnown RBP7.84□□□□□ -1.15
COPA-203ENST00000481040 TMA7Q9Y2S6 64 aaKnown RBP7.84□□□□□ -1.15
COPA-203ENST00000481040 EIF1AYO14602 144 aaKnown RBP7.83□□□□□ -1.16
COPA-203ENST00000481040 RACK1P63244 317 aaKnown RBP7.83□□□□□ -1.16
COPA-203ENST00000481040 RBL2Q08999 1139 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 ORC1Q13415 861 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 TEAD4Q15561 434 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 RTN1Q16799 776 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 ZNF394Q53GI3 561 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 SH3PXD2AQ5TCZ1 1133 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 ZSCAN1Q8NBB4 408 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 IFT43Q96FT9 208 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 HCN4Q9Y3Q4 1203 aa7.83□□□□□ -1.16
COPA-203ENST00000481040 TLDC2A0PJX2 215 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 FIGNL2A6NMB9 653 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 SPINT1O43278 529 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 UPP2O95045 317 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 PCSK2P16519 638 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 EIF4BP23588 611 aaKnown RBP7.82□□□□□ -1.16
COPA-203ENST00000481040 NOS2P35228 1153 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 GPR161Q8N6U8 529 aaKnown RBP7.82□□□□□ -1.16
COPA-203ENST00000481040 PMFBP1Q8TBY8 1022 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 ZDHHC1Q8WTX9 485 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 KLK14Q9P0G3 267 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 ZNF232Q9UNY5 417 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 PCDHGB7Q9Y5F8 929 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 HRH3Q9Y5N1 445 aa7.82□□□□□ -1.16
COPA-203ENST00000481040 TTLL8A6PVC2 850 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 NEFLP07196 543 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 KRT76Q01546 638 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 PTPN12Q05209 780 aaKnown RBP7.81□□□□□ -1.16
COPA-203ENST00000481040 ZNF662Q6ZS27 426 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 USP48Q86UV5 1035 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 KDF1Q8NAX2 398 aaPredicted RBP7.81□□□□□ -1.16
COPA-203ENST00000481040 CNKSR1Q969H4 720 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 ESYT1Q9BSJ8 1104 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 DNAJC25Q9H1X3 360 aa7.81□□□□□ -1.16
COPA-203ENST00000481040 CTSOP43234 321 aaPredicted RBP7.8□□□□□ -1.16
COPA-203ENST00000481040 PTSQ03393 145 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 SOGA3Q5TF21 947 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 HS2ST1Q7LGA3 356 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 GPR152Q8TDT2 470 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 L3MBTL2Q969R5 705 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 NUDT16Q96DE0 195 aaKnown RBP7.8□□□□□ -1.16
COPA-203ENST00000481040 PIF1Q9H611 641 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 SRA1Q9HD15 236 aaKnown RBP7.8□□□□□ -1.16
COPA-203ENST00000481040 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
COPA-203ENST00000481040 OPLAHO14841 1288 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 RELBQ01201 579 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 VPS37DQ86XT2 251 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 TREML1Q86YW5 311 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 TTC16Q8NEE8 873 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 PHACTR1Q9C0D0 580 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 GGNBP2Q9H3C7 697 aa7.79□□□□□ -1.16
COPA-203ENST00000481040 CPNE3O75131 537 aaKnown RBP7.78□□□□□ -1.16
COPA-203ENST00000481040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.16
COPA-203ENST00000481040 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.78□□□□□ -1.16
COPA-203ENST00000481040 ZNF295-AS1Q8N0V1 137 aa7.78□□□□□ -1.16
COPA-203ENST00000481040 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
COPA-203ENST00000481040 ZSWIM4Q9H7M6 989 aa7.78□□□□□ -1.16
COPA-203ENST00000481040 GGT7Q9UJ14 662 aa7.78□□□□□ -1.16
COPA-203ENST00000481040 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
COPA-203ENST00000481040 USP31Q70CQ4 1352 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms