RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PI4KAP2A4QPH2 592 aa26.17■■□□□ 1.78
VARS-224ENST00000479051 ATP5J2-PTCD1G3V325 749 aa26.17■■□□□ 1.78
VARS-224ENST00000479051 CT47B1P0C2W7 299 aaPredicted RBP26.17■■□□□ 1.78
VARS-224ENST00000479051 NEXNQ0ZGT2 675 aa26.17■■□□□ 1.78
VARS-224ENST00000479051 PI4KAP1Q8N8J0 262 aa26.17■■□□□ 1.78
VARS-224ENST00000479051 ZNF622Q969S3 477 aaKnown RBP eCLIP26.17■■□□□ 1.78
VARS-224ENST00000479051 MYD88Q99836 296 aa26.17■■□□□ 1.78
VARS-224ENST00000479051 METTL22Q9BUU2 404 aaPredicted RBP26.17■■□□□ 1.78
VARS-224ENST00000479051 TRMT112Q9UI30 125 aaKnown RBP26.17■■□□□ 1.78
VARS-224ENST00000479051 RIC1Q4ADV7 1423 aa26.16■■□□□ 1.78
VARS-224ENST00000479051 TRIM28Q13263 835 aaKnown RBP26.16■■□□□ 1.78
VARS-224ENST00000479051 BRCA1P38398 1863 aaKnown RBP26.16■■□□□ 1.78
VARS-224ENST00000479051 SH3TC1Q8TE82 1336 aa26.15■■□□□ 1.78
VARS-224ENST00000479051 DLEC1Q9Y238 1755 aa26.15■■□□□ 1.78
VARS-224ENST00000479051 TTLL6Q8N841 843 aa26.15■■□□□ 1.78
VARS-224ENST00000479051 MASTLQ96GX5 879 aa26.15■■□□□ 1.78
VARS-224ENST00000479051 ABCC12Q96J65 1359 aa26.15■■□□□ 1.78
VARS-224ENST00000479051 ZBED9Q6R2W3 1325 aa26.14■■□□□ 1.78
VARS-224ENST00000479051 SRGNP10124 158 aa26.14■■□□□ 1.78
VARS-224ENST00000479051 STYK1Q6J9G0 422 aa26.14■■□□□ 1.78
VARS-224ENST00000479051 CNKSR1Q969H4 720 aa26.14■■□□□ 1.78
VARS-224ENST00000479051 ADCY9O60503 1353 aa26.14■■□□□ 1.78
VARS-224ENST00000479051 KLRG2A4D1S0 409 aaPredicted RBP26.13■■□□□ 1.77
VARS-224ENST00000479051 NPR1P16066 1061 aa26.13■■□□□ 1.77
VARS-224ENST00000479051 CCDC191Q8NCU4 936 aa26.13■■□□□ 1.77
VARS-224ENST00000479051 NLRP3Q96P20 1036 aa26.12■■□□□ 1.77
VARS-224ENST00000479051 ALDH1L2Q3SY69 923 aa26.11■■□□□ 1.77
VARS-224ENST00000479051 SLC10A5Q5PT55 438 aa26.11■■□□□ 1.77
VARS-224ENST00000479051 DNAAF4Q8WXU2 420 aa26.11■■□□□ 1.77
VARS-224ENST00000479051 CWC25Q9NXE8 425 aaPredicted RBP26.11■■□□□ 1.77
VARS-224ENST00000479051 COL11A2P13942 1736 aaPredicted RBP26.11■■□□□ 1.77
VARS-224ENST00000479051 HSP90B1P14625 803 aaKnown RBP26.1■■□□□ 1.77
VARS-224ENST00000479051 RPGRQ92834 1020 aaKnown RBP26.1■■□□□ 1.77
VARS-224ENST00000479051 ARFGEF1Q9Y6D6 1849 aa26.09■■□□□ 1.77
VARS-224ENST00000479051 ALDH1B1P30837 517 aa26.08■■□□□ 1.77
VARS-224ENST00000479051 CRY2Q49AN0 593 aa26.08■■□□□ 1.77
VARS-224ENST00000479051 MRPL50Q8N5N7 158 aaKnown RBP26.08■■□□□ 1.77
VARS-224ENST00000479051 ZBTB38Q8NAP3 1195 aaPredicted RBP26.08■■□□□ 1.77
VARS-224ENST00000479051 SSH1Q8WYL5 1049 aa26.08■■□□□ 1.77
VARS-224ENST00000479051 TNRC6CQ9HCJ0 1690 aaKnown RBP26.08■■□□□ 1.77
VARS-224ENST00000479051 ARHGAP27Q6ZUM4 889 aa26.07■■□□□ 1.76
VARS-224ENST00000479051 FAM89AQ96GI7 184 aa26.07■■□□□ 1.76
VARS-224ENST00000479051 SMC4Q9NTJ3 1288 aa26.07■■□□□ 1.76
VARS-224ENST00000479051 HCLS1P14317 486 aaPredicted RBP26.06■■□□□ 1.76
VARS-224ENST00000479051 PTPRCP08575 1304 aa26.06■■□□□ 1.76
VARS-224ENST00000479051 PCCAP05165 728 aaPredicted RBP26.05■■□□□ 1.76
VARS-224ENST00000479051 IGKV5-2P06315 115 aa26.05■■□□□ 1.76
VARS-224ENST00000479051 PRPF40BQ6NWY9 871 aaKnown RBP26.05■■□□□ 1.76
VARS-224ENST00000479051 LINS1Q8NG48 757 aa26.05■■□□□ 1.76
VARS-224ENST00000479051 RBM17Q96I25 401 aaKnown RBP26.05■■□□□ 1.76
VARS-224ENST00000479051 CHD4Q14839 1912 aa26.05■■□□□ 1.76
VARS-224ENST00000479051 NEURL1BA8MQ27 555 aa26.04■■□□□ 1.76
VARS-224ENST00000479051 IRS4O14654 1257 aaPredicted RBP26.04■■□□□ 1.76
VARS-224ENST00000479051 RTL5Q5HYW3 569 aaPredicted RBP26.04■■□□□ 1.76
VARS-224ENST00000479051 SYNE4Q8N205 404 aa26.04■■□□□ 1.76
VARS-224ENST00000479051 BCL2L13Q9BXK5 485 aa26.04■■□□□ 1.76
VARS-224ENST00000479051 HOXA10P31260 410 aaPredicted RBP26.03■■□□□ 1.76
VARS-224ENST00000479051 CWF19L2Q2TBE0 894 aaKnown RBP26.03■■□□□ 1.76
VARS-224ENST00000479051 SOGA3Q5TF21 947 aa26.03■■□□□ 1.76
VARS-224ENST00000479051 F6X3S4 739 aa26.02■■□□□ 1.76
VARS-224ENST00000479051 YY1P25490 414 aa26.01■■□□□ 1.75
VARS-224ENST00000479051 GOLGB1Q14789 3259 aaKnown RBP26.01■■□□□ 1.75
VARS-224ENST00000479051 C3orf67Q6ZVT6 689 aa26.01■■□□□ 1.75
VARS-224ENST00000479051 CRAMP1Q96RY5 1269 aa26.01■■□□□ 1.75
VARS-224ENST00000479051 C21orf2O43822 256 aa26■■□□□ 1.75
VARS-224ENST00000479051 GCKRQ14397 625 aa26■■□□□ 1.75
VARS-224ENST00000479051 SLC4A10Q6U841 1118 aa26■■□□□ 1.75
VARS-224ENST00000479051 ZNF219Q9P2Y4 722 aaPredicted RBP26■■□□□ 1.75
VARS-224ENST00000479051 CDHR2Q9BYE9 1310 aa25.99■■□□□ 1.75
VARS-224ENST00000479051 DDX46Q7L014 1031 aaKnown RBP25.99■■□□□ 1.75
VARS-224ENST00000479051 CACNA1SQ13698 1873 aa25.99■■□□□ 1.75
VARS-224ENST00000479051 SLX4Q8IY92 1834 aa25.98■■□□□ 1.75
VARS-224ENST00000479051 LAMB2P55268 1798 aa25.98■■□□□ 1.75
VARS-224ENST00000479051 DDX60Q8IY21 1712 aaKnown RBP25.98■■□□□ 1.75
VARS-224ENST00000479051 RARSP54136 660 aaKnown RBP25.98■■□□□ 1.75
VARS-224ENST00000479051 BEND3Q5T5X7 828 aa25.98■■□□□ 1.75
VARS-224ENST00000479051 PDE8AO60658 829 aa25.97■■□□□ 1.75
VARS-224ENST00000479051 ALDH1L1O75891 902 aa25.97■■□□□ 1.75
VARS-224ENST00000479051 BRPF1P55201 1214 aaPredicted RBP25.97■■□□□ 1.75
VARS-224ENST00000479051 SF3B3Q15393 1217 aaKnown RBP25.97■■□□□ 1.75
VARS-224ENST00000479051 TMX4Q9H1E5 349 aaPredicted RBP25.97■■□□□ 1.75
VARS-224ENST00000479051 KIF16BQ96L93 1317 aa25.96■■□□□ 1.75
VARS-224ENST00000479051 CCDC93Q567U6 631 aa25.96■■□□□ 1.75
VARS-224ENST00000479051 UBE3BQ7Z3V4 1068 aa25.96■■□□□ 1.75
VARS-224ENST00000479051 SRCIN1Q9C0H9 1055 aa25.96■■□□□ 1.75
VARS-224ENST00000479051 ABCC4O15439 1325 aa25.95■■□□□ 1.75
VARS-224ENST00000479051 H7C1W4 665 aa25.95■■□□□ 1.74
VARS-224ENST00000479051 CC2D2BQ6DHV5 1058 aa25.95■■□□□ 1.74
VARS-224ENST00000479051 JARID2Q92833 1246 aaPredicted RBP25.95■■□□□ 1.74
VARS-224ENST00000479051 PPEF1O14829 653 aaPredicted RBP25.94■■□□□ 1.74
VARS-224ENST00000479051 CCDC152Q4G0S7 254 aa25.94■■□□□ 1.74
VARS-224ENST00000479051 API5Q9BZZ5 524 aaKnown RBP25.94■■□□□ 1.74
VARS-224ENST00000479051 BBOX1O75936 387 aa25.93■■□□□ 1.74
VARS-224ENST00000479051 RTKN2Q8IZC4 609 aa25.93■■□□□ 1.74
VARS-224ENST00000479051 C7orf43Q8WVR3 580 aa25.93■■□□□ 1.74
VARS-224ENST00000479051 NOB1Q9ULX3 412 aaKnown RBP25.93■■□□□ 1.74
VARS-224ENST00000479051 GRAPQ13588 217 aa25.92■■□□□ 1.74
VARS-224ENST00000479051 GRIPAP1Q4V328 841 aa25.92■■□□□ 1.74
VARS-224ENST00000479051 GRAPLQ8TC17 118 aaPredicted RBP25.92■■□□□ 1.74
VARS-224ENST00000479051 TAOK3Q9H2K8 898 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms