RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NBPF15Q8N660 670 aa19.38■□□□□ 0.69
USP11-207ENST00000478596 PGAP2Q9UHJ9 254 aa19.38■□□□□ 0.69
USP11-207ENST00000478596 TPTE2Q6XPS3 522 aa19.36■□□□□ 0.69
USP11-207ENST00000478596 DZIP3Q86Y13 1208 aaKnown RBP19.36■□□□□ 0.69
USP11-207ENST00000478596 GLIS2Q9BZE0 524 aaPredicted RBP19.36■□□□□ 0.69
USP11-207ENST00000478596 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
USP11-207ENST00000478596 A1BGP04217 495 aa19.35■□□□□ 0.69
USP11-207ENST00000478596 GRIPAP1Q4V328 841 aa19.35■□□□□ 0.69
USP11-207ENST00000478596 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
USP11-207ENST00000478596 HABP4Q5JVS0 413 aaKnown RBP19.34■□□□□ 0.69
USP11-207ENST00000478596 CTU1Q7Z7A3 348 aaKnown RBP19.34■□□□□ 0.69
USP11-207ENST00000478596 MORC1Q86VD1 984 aa19.34■□□□□ 0.69
USP11-207ENST00000478596 LARGE2Q8N3Y3 721 aa19.34■□□□□ 0.69
USP11-207ENST00000478596 ZC3H15Q8WU90 426 aaKnown RBP19.34■□□□□ 0.69
USP11-207ENST00000478596 ZNF652Q9Y2D9 606 aa19.34■□□□□ 0.69
USP11-207ENST00000478596 RGL2O15211 777 aa19.33■□□□□ 0.68
USP11-207ENST00000478596 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.68
USP11-207ENST00000478596 ANP32CO43423 234 aa19.32■□□□□ 0.68
USP11-207ENST00000478596 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
USP11-207ENST00000478596 CRY2Q49AN0 593 aa19.32■□□□□ 0.68
USP11-207ENST00000478596 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
USP11-207ENST00000478596 ZNF408Q9H9D4 720 aa19.32■□□□□ 0.68
USP11-207ENST00000478596 FAM155AB1AL88 458 aaPredicted RBP19.31■□□□□ 0.68
USP11-207ENST00000478596 HUNKP57058 714 aa19.31■□□□□ 0.68
USP11-207ENST00000478596 CDC37L1Q7L3B6 337 aa19.31■□□□□ 0.68
USP11-207ENST00000478596 RNF186Q9NXI6 227 aa19.31■□□□□ 0.68
USP11-207ENST00000478596 HPS5Q9UPZ3 1129 aa19.31■□□□□ 0.68
USP11-207ENST00000478596 NPC1L1Q9UHC9 1359 aa19.31■□□□□ 0.68
USP11-207ENST00000478596 PER1O15534 1290 aaPredicted RBP19.3■□□□□ 0.68
USP11-207ENST00000478596 NIM1KQ8IY84 436 aa19.3■□□□□ 0.68
USP11-207ENST00000478596 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
USP11-207ENST00000478596 TRPA1O75762 1119 aa19.29■□□□□ 0.68
USP11-207ENST00000478596 NIP7Q9Y221 180 aaKnown RBP eCLIP19.29■□□□□ 0.68
USP11-207ENST00000478596 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
USP11-207ENST00000478596 RGMBQ6NW40 437 aa19.28■□□□□ 0.68
USP11-207ENST00000478596 CCDC102AQ96A19 550 aa19.28■□□□□ 0.68
USP11-207ENST00000478596 HIRAP54198 1017 aaPredicted RBP19.27■□□□□ 0.68
USP11-207ENST00000478596 KIF23Q02241 960 aaPredicted RBP19.27■□□□□ 0.68
USP11-207ENST00000478596 PKN2Q16513 984 aaKnown RBP19.27■□□□□ 0.68
USP11-207ENST00000478596 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
USP11-207ENST00000478596 HOXA10P31260 410 aaPredicted RBP19.26■□□□□ 0.67
USP11-207ENST00000478596 GMPSP49915 693 aaPredicted RBP19.26■□□□□ 0.67
USP11-207ENST00000478596 CXCL9Q07325 125 aa19.26■□□□□ 0.67
USP11-207ENST00000478596 TEFQ10587 303 aa19.26■□□□□ 0.67
USP11-207ENST00000478596 HMOX1P09601 288 aa19.25■□□□□ 0.67
USP11-207ENST00000478596 ZNRF3Q9ULT6 936 aa19.25■□□□□ 0.67
USP11-207ENST00000478596 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
USP11-207ENST00000478596 GTF2E1P29083 439 aaPredicted RBP19.24■□□□□ 0.67
USP11-207ENST00000478596 IL17REQ8NFR9 667 aa19.24■□□□□ 0.67
USP11-207ENST00000478596 FAM177BA6PVY3 158 aa19.23■□□□□ 0.67
USP11-207ENST00000478596 RALBP1Q15311 655 aa19.23■□□□□ 0.67
USP11-207ENST00000478596 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
USP11-207ENST00000478596 PIP4K2AP48426 406 aaPredicted RBP19.22■□□□□ 0.67
USP11-207ENST00000478596 AOC3Q16853 763 aa19.22■□□□□ 0.67
USP11-207ENST00000478596 USP48Q86UV5 1035 aa19.22■□□□□ 0.67
USP11-207ENST00000478596 TRPM4Q8TD43 1214 aa19.22■□□□□ 0.67
USP11-207ENST00000478596 CSRNP1Q96S65 589 aa19.22■□□□□ 0.67
USP11-207ENST00000478596 RIC1Q4ADV7 1423 aa19.22■□□□□ 0.67
USP11-207ENST00000478596 ABCC12Q96J65 1359 aa19.21■□□□□ 0.67
USP11-207ENST00000478596 FXR1P51114 621 aaKnown RBP eCLIP19.21■□□□□ 0.67
USP11-207ENST00000478596 ZNF157P51786 506 aaPredicted RBP19.21■□□□□ 0.67
USP11-207ENST00000478596 REM2Q8IYK8 340 aaPredicted RBP19.21■□□□□ 0.67
USP11-207ENST00000478596 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
USP11-207ENST00000478596 CRAMP1Q96RY5 1269 aa19.21■□□□□ 0.67
USP11-207ENST00000478596 GBA2Q9HCG7 927 aaPredicted RBP19.21■□□□□ 0.67
USP11-207ENST00000478596 MYBBP1AQ9BQG0 1328 aaKnown RBP19.21■□□□□ 0.67
USP11-207ENST00000478596 PPEF1O14829 653 aaPredicted RBP19.2■□□□□ 0.66
USP11-207ENST00000478596 C2orf69Q8N8R5 385 aa19.2■□□□□ 0.66
USP11-207ENST00000478596 NYXQ9GZU5 481 aa19.2■□□□□ 0.66
USP11-207ENST00000478596 PRKRIP1Q9H875 184 aaPredicted RBP19.2■□□□□ 0.66
USP11-207ENST00000478596 SLC10A3P09131 477 aa19.19■□□□□ 0.66
USP11-207ENST00000478596 SLC51AQ86UW1 340 aa19.19■□□□□ 0.66
USP11-207ENST00000478596 BCL2L13Q9BXK5 485 aa19.19■□□□□ 0.66
USP11-207ENST00000478596 SIPA1L3O60292 1781 aaPredicted RBP19.19■□□□□ 0.66
USP11-207ENST00000478596 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
USP11-207ENST00000478596 KCNQ3O43525 872 aa19.18■□□□□ 0.66
USP11-207ENST00000478596 RBM17Q96I25 401 aaKnown RBP19.18■□□□□ 0.66
USP11-207ENST00000478596 RTFDC1Q9BY42 306 aaPredicted RBP19.18■□□□□ 0.66
USP11-207ENST00000478596 TNIP1Q15025 636 aa19.17■□□□□ 0.66
USP11-207ENST00000478596 HLFQ16534 295 aa19.17■□□□□ 0.66
USP11-207ENST00000478596 DLK2Q6UY11 383 aa19.17■□□□□ 0.66
USP11-207ENST00000478596 NUTM1Q86Y26 1132 aa19.17■□□□□ 0.66
USP11-207ENST00000478596 SUPT20HQ8NEM7 779 aa19.17■□□□□ 0.66
USP11-207ENST00000478596 CNOT7Q9UIV1 285 aaKnown RBP19.17■□□□□ 0.66
USP11-207ENST00000478596 MKI67P46013 3256 aaKnown RBP19.17■□□□□ 0.66
USP11-207ENST00000478596 CEMIPQ8WUJ3 1361 aa19.17■□□□□ 0.66
USP11-207ENST00000478596 NBPF26B4DH59 902 aa19.16■□□□□ 0.66
USP11-207ENST00000478596 H7C1D1 291 aa19.16■□□□□ 0.66
USP11-207ENST00000478596 PPP2R1AP30153 589 aa19.16■□□□□ 0.66
USP11-207ENST00000478596 NBPF10Q6P3W6 841 aaKnown RBP19.16■□□□□ 0.66
USP11-207ENST00000478596 KRT26Q7Z3Y9 468 aa19.16■□□□□ 0.66
USP11-207ENST00000478596 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
USP11-207ENST00000478596 HDAC9Q9UKV0 1011 aa19.16■□□□□ 0.66
USP11-207ENST00000478596 PRAMEF22A3QJZ6 481 aa19.15■□□□□ 0.66
USP11-207ENST00000478596 BTBD11A6QL63 1104 aa19.15■□□□□ 0.66
USP11-207ENST00000478596 SNRPA1P09661 255 aaKnown RBP19.15■□□□□ 0.66
USP11-207ENST00000478596 TMX4Q9H1E5 349 aaPredicted RBP19.15■□□□□ 0.66
USP11-207ENST00000478596 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
USP11-207ENST00000478596 IBTKQ9P2D0 1353 aaPredicted RBP19.15■□□□□ 0.66
USP11-207ENST00000478596 TCERG1O14776 1098 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms