RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
SAMM50-203ENST00000474323 NBPF6Q5VWK0 638 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 CEP135Q66GS9 1140 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 MRVI1Q9Y6F6 885 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 DNM1Q05193 864 aaKnown RBP17.23■□□□□ 0.35
SAMM50-203ENST00000474323 TYRO3Q06418 890 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 KMT5BQ4FZB7 885 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
SAMM50-203ENST00000474323 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
SAMM50-203ENST00000474323 TULP2O00295 520 aa17.22■□□□□ 0.35
SAMM50-203ENST00000474323 CABLES1Q8TDN4 633 aa17.22■□□□□ 0.35
SAMM50-203ENST00000474323 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
SAMM50-203ENST00000474323 ZNF75DP51815 510 aa17.22■□□□□ 0.35
SAMM50-203ENST00000474323 LUZP1Q86V48 1076 aa17.22■□□□□ 0.35
SAMM50-203ENST00000474323 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
SAMM50-203ENST00000474323 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
SAMM50-203ENST00000474323 AOX1Q06278 1338 aa17.21■□□□□ 0.35
SAMM50-203ENST00000474323 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
SAMM50-203ENST00000474323 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
SAMM50-203ENST00000474323 MTMR6Q9Y217 621 aa17.21■□□□□ 0.35
SAMM50-203ENST00000474323 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.35
SAMM50-203ENST00000474323 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
SAMM50-203ENST00000474323 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.34
SAMM50-203ENST00000474323 AK2P54819 239 aa17.21■□□□□ 0.34
SAMM50-203ENST00000474323 SLAIN2Q9P270 581 aa17.21■□□□□ 0.34
SAMM50-203ENST00000474323 NRBP1Q9UHY1 535 aa17.21■□□□□ 0.34
SAMM50-203ENST00000474323 AXIN2Q9Y2T1 843 aa17.21■□□□□ 0.34
SAMM50-203ENST00000474323 GNAI2P04899 355 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 CBX8Q9HC52 389 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 PXDNQ92626 1479 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
SAMM50-203ENST00000474323 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 SNX14Q9Y5W7 946 aa17.2■□□□□ 0.34
SAMM50-203ENST00000474323 RAD50Q92878 1312 aa17.19■□□□□ 0.34
SAMM50-203ENST00000474323 TNS3Q68CZ2 1445 aa17.19■□□□□ 0.34
SAMM50-203ENST00000474323 CHL1O00533 1208 aa17.19■□□□□ 0.34
SAMM50-203ENST00000474323 NEMFO60524 1076 aa17.19■□□□□ 0.34
SAMM50-203ENST00000474323 RGPD5Q99666 1765 aa17.19■□□□□ 0.34
SAMM50-203ENST00000474323 ELP1O95163 1332 aa17.19■□□□□ 0.34
SAMM50-203ENST00000474323 CDC25BP30305 580 aa17.18■□□□□ 0.34
SAMM50-203ENST00000474323 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
SAMM50-203ENST00000474323 CACTINQ8WUQ7 758 aaKnown RBP17.18■□□□□ 0.34
SAMM50-203ENST00000474323 ZNF215Q9UL58 517 aaPredicted RBP17.18■□□□□ 0.34
SAMM50-203ENST00000474323 RBM6P78332 1123 aaKnown RBP17.18■□□□□ 0.34
SAMM50-203ENST00000474323 RNF20Q5VTR2 975 aa17.18■□□□□ 0.34
SAMM50-203ENST00000474323 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
SAMM50-203ENST00000474323 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
SAMM50-203ENST00000474323 GJB2P29033 226 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 ZNF592Q92610 1267 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 KRT85P78386 507 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 FBXO38Q6PIJ6 1188 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 IL25Q9H293 177 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 CRB1P82279 1406 aa17.17■□□□□ 0.34
SAMM50-203ENST00000474323 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
SAMM50-203ENST00000474323 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
SAMM50-203ENST00000474323 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
SAMM50-203ENST00000474323 NYAP1Q6ZVC0 841 aa17.16■□□□□ 0.34
SAMM50-203ENST00000474323 SGSM2O43147 1006 aa17.16■□□□□ 0.34
SAMM50-203ENST00000474323 CAVIN2O95810 425 aa17.16■□□□□ 0.34
SAMM50-203ENST00000474323 ZSCAN31Q96LW9 406 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-203ENST00000474323 SH2B1Q9NRF2 756 aaPredicted RBP17.16■□□□□ 0.34
SAMM50-203ENST00000474323 CYP2C19P33261 490 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
SAMM50-203ENST00000474323 TTC6Q86TZ1 520 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 LRRC8AQ8IWT6 810 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 DDX19AQ9NUU7 478 aaKnown RBP17.15■□□□□ 0.34
SAMM50-203ENST00000474323 ERICH4A6NGS2 130 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 LIG1P18858 919 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 CAMK4Q16566 473 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 SLC4A10Q6U841 1118 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 HYPKQ9NX55 129 aa17.15■□□□□ 0.34
SAMM50-203ENST00000474323 CAPN2P17655 700 aa17.14■□□□□ 0.33
SAMM50-203ENST00000474323 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
SAMM50-203ENST00000474323 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
SAMM50-203ENST00000474323 SLU7O95391 586 aaKnown RBP17.14■□□□□ 0.33
SAMM50-203ENST00000474323 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
SAMM50-203ENST00000474323 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
SAMM50-203ENST00000474323 RASEFQ8IZ41 740 aa17.14■□□□□ 0.33
SAMM50-203ENST00000474323 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
SAMM50-203ENST00000474323 GNAI3P08754 354 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 ZNF165P49910 485 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 ELF2Q15723 593 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 VPS37CA5D8V6 355 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-203ENST00000474323 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-203ENST00000474323 CCDC144BQ3MJ40 725 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms