RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-208ENST00000473820 MRC1P22897 1456 aa12.96□□□□□ -0.34
PPP2R1A-208ENST00000473820 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 ZNF541Q9H0D2 1346 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 RASSF10A6NK89 507 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 HSPA8P11142 646 aaKnown RBP12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 ALDH1B1P30837 517 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 FAM9BQ8IZU0 186 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 SCN4AP35499 1836 aa12.95□□□□□ -0.34
PPP2R1A-208ENST00000473820 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
PPP2R1A-208ENST00000473820 CACNA1SQ13698 1873 aa12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 VIRMAQ69YN4 1812 aaKnown RBP12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 SLC34A2O95436 690 aa12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 ECE1P42892 770 aa12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 MLLT1Q03111 559 aaPredicted RBP12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 OLFM4Q6UX06 510 aa12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 GPC2Q8N158 579 aa12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
PPP2R1A-208ENST00000473820 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
PPP2R1A-208ENST00000473820 FZD9O00144 591 aa12.92□□□□□ -0.34
PPP2R1A-208ENST00000473820 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
PPP2R1A-208ENST00000473820 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
PPP2R1A-208ENST00000473820 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
PPP2R1A-208ENST00000473820 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
PPP2R1A-208ENST00000473820 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
PPP2R1A-208ENST00000473820 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
PPP2R1A-208ENST00000473820 UBR2Q8IWV8 1755 aa12.9□□□□□ -0.34
PPP2R1A-208ENST00000473820 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
PPP2R1A-208ENST00000473820 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
PPP2R1A-208ENST00000473820 KLRG2A4D1S0 409 aaPredicted RBP12.89□□□□□ -0.35
PPP2R1A-208ENST00000473820 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
PPP2R1A-208ENST00000473820 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
PPP2R1A-208ENST00000473820 TCERG1O14776 1098 aaKnown RBP12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 NGEFQ8N5V2 710 aa12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 RPGRQ92834 1020 aaKnown RBP12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 PSMD1Q99460 953 aa12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 SCN7AQ01118 1682 aa12.88□□□□□ -0.35
PPP2R1A-208ENST00000473820 CHL1O00533 1208 aa12.87□□□□□ -0.35
PPP2R1A-208ENST00000473820 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■■□□□ 14.4
PPP2R1A-208ENST00000473820 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
PPP2R1A-208ENST00000473820 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
PPP2R1A-208ENST00000473820 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
PPP2R1A-208ENST00000473820 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
PPP2R1A-208ENST00000473820 MAP2K2P36507 400 aa12.86□□□□□ -0.35
PPP2R1A-208ENST00000473820 EPS15P42566 896 aa12.86□□□□□ -0.35
PPP2R1A-208ENST00000473820 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
PPP2R1A-208ENST00000473820 HLFQ16534 295 aa12.86□□□□□ -0.35
PPP2R1A-208ENST00000473820 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
PPP2R1A-208ENST00000473820 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
PPP2R1A-208ENST00000473820 TRAF5O00463 557 aa12.85□□□□□ -0.35
PPP2R1A-208ENST00000473820 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
PPP2R1A-208ENST00000473820 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
PPP2R1A-208ENST00000473820 NIM1KQ8IY84 436 aa12.85□□□□□ -0.35
PPP2R1A-208ENST00000473820 RBM17Q96I25 401 aaKnown RBP12.85□□□□□ -0.35
PPP2R1A-208ENST00000473820 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 RGL2O15211 777 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 AOC2O75106 756 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 RGS19P49795 217 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 GNAI1P63096 354 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 CST9Q5W186 159 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 WWC1Q8IX03 1113 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
PPP2R1A-208ENST00000473820 CA12O43570 354 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 MYL6BP14649 208 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 SCNN1DP51172 638 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 IFT57Q9NWB7 429 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
PPP2R1A-208ENST00000473820 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 PPIP5K2O43314 1243 aa12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 ZNF408Q9H9D4 720 aa12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 ADARB2Q9NS39 739 aaKnown RBP12.82□□□□□ -0.36
PPP2R1A-208ENST00000473820 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
PPP2R1A-208ENST00000473820 GPTP24298 496 aa12.81□□□□□ -0.36
PPP2R1A-208ENST00000473820 DGKZQ13574 1117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms