RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TRPA1O75762 1119 aa14.02□□□□□ -0.17
CDHR3-209ENST00000472116 PKN2Q16513 984 aaKnown RBP14.02□□□□□ -0.17
CDHR3-209ENST00000472116 CDC37L1Q7L3B6 337 aa14.02□□□□□ -0.17
CDHR3-209ENST00000472116 NIM1KQ8IY84 436 aa14.02□□□□□ -0.17
CDHR3-209ENST00000472116 RNMTO43148 476 aaKnown RBP14.01□□□□□ -0.17
CDHR3-209ENST00000472116 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
CDHR3-209ENST00000472116 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
CDHR3-209ENST00000472116 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
CDHR3-209ENST00000472116 LGR6Q9HBX8 967 aa14.01□□□□□ -0.17
CDHR3-209ENST00000472116 GPRC5DQ9NZD1 345 aa14.01□□□□□ -0.17
CDHR3-209ENST00000472116 HDAC9Q9UKV0 1011 aa14.01□□□□□ -0.17
CDHR3-209ENST00000472116 POLR2AP24928 1970 aaKnown RBP14.01□□□□□ -0.17
CDHR3-209ENST00000472116 CAMTA2O94983 1202 aa14□□□□□ -0.17
CDHR3-209ENST00000472116 GTF2E1P29083 439 aaPredicted RBP14□□□□□ -0.17
CDHR3-209ENST00000472116 RGMBQ6NW40 437 aa14□□□□□ -0.17
CDHR3-209ENST00000472116 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
CDHR3-209ENST00000472116 ZIC5Q96T25 663 aa14□□□□□ -0.17
CDHR3-209ENST00000472116 RNF186Q9NXI6 227 aa14□□□□□ -0.17
CDHR3-209ENST00000472116 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
CDHR3-209ENST00000472116 KIF23Q02241 960 aaPredicted RBP13.99□□□□□ -0.17
CDHR3-209ENST00000472116 ZC3H15Q8WU90 426 aaKnown RBP13.99□□□□□ -0.17
CDHR3-209ENST00000472116 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
CDHR3-209ENST00000472116 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
CDHR3-209ENST00000472116 COL4A5P29400 1685 aa13.98□□□□□ -0.17
CDHR3-209ENST00000472116 HEG1Q9ULI3 1381 aa13.97□□□□□ -0.17
CDHR3-209ENST00000472116 ZNF157P51786 506 aaPredicted RBP13.97□□□□□ -0.17
CDHR3-209ENST00000472116 CLEC4GQ6UXB4 293 aa13.97□□□□□ -0.17
CDHR3-209ENST00000472116 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
CDHR3-209ENST00000472116 BCL2L13Q9BXK5 485 aa13.97□□□□□ -0.17
CDHR3-209ENST00000472116 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
CDHR3-209ENST00000472116 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
CDHR3-209ENST00000472116 DLL1O00548 723 aa13.96□□□□□ -0.17
CDHR3-209ENST00000472116 PPIP5K2O43314 1243 aa13.96□□□□□ -0.17
CDHR3-209ENST00000472116 FXR1P51114 621 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDHR3-209ENST00000472116 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
CDHR3-209ENST00000472116 RPGRQ92834 1020 aaKnown RBP13.95□□□□□ -0.18
CDHR3-209ENST00000472116 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
CDHR3-209ENST00000472116 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDHR3-209ENST00000472116 NPC1L1Q9UHC9 1359 aa13.95□□□□□ -0.18
CDHR3-209ENST00000472116 FAM155AB1AL88 458 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-209ENST00000472116 A1BGP04217 495 aa13.94□□□□□ -0.18
CDHR3-209ENST00000472116 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-209ENST00000472116 TEFQ10587 303 aa13.94□□□□□ -0.18
CDHR3-209ENST00000472116 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-209ENST00000472116 GBA2Q9HCG7 927 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-209ENST00000472116 SNED1Q8TER0 1413 aa13.93□□□□□ -0.18
CDHR3-209ENST00000472116 ABCB7O75027 752 aa13.93□□□□□ -0.18
CDHR3-209ENST00000472116 USP48Q86UV5 1035 aa13.93□□□□□ -0.18
CDHR3-209ENST00000472116 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
CDHR3-209ENST00000472116 H7C1D1 291 aa13.92□□□□□ -0.18
CDHR3-209ENST00000472116 ZNF790Q6PG37 636 aa13.92□□□□□ -0.18
CDHR3-209ENST00000472116 FBXO46Q6PJ61 603 aaPredicted RBP13.92□□□□□ -0.18
CDHR3-209ENST00000472116 VPS33BQ9H267 617 aa13.92□□□□□ -0.18
CDHR3-209ENST00000472116 ZNRF3Q9ULT6 936 aa13.92□□□□□ -0.18
CDHR3-209ENST00000472116 SIPA1L3O60292 1781 aaPredicted RBP13.91□□□□□ -0.18
CDHR3-209ENST00000472116 KIAA0100Q14667 2235 aaKnown RBP13.91□□□□□ -0.18
CDHR3-209ENST00000472116 CXCL9Q07325 125 aa13.91□□□□□ -0.18
CDHR3-209ENST00000472116 TNIP1Q15025 636 aa13.91□□□□□ -0.18
CDHR3-209ENST00000472116 AOC3Q16853 763 aa13.91□□□□□ -0.18
CDHR3-209ENST00000472116 SUPT20HQ8NEM7 779 aa13.91□□□□□ -0.18
CDHR3-209ENST00000472116 CSRNP1Q96S65 589 aa13.91□□□□□ -0.18
CDHR3-209ENST00000472116 NYXQ9GZU5 481 aa13.91□□□□□ -0.18
CDHR3-209ENST00000472116 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
CDHR3-209ENST00000472116 PPEF1O14829 653 aaPredicted RBP13.9□□□□□ -0.18
CDHR3-209ENST00000472116 SLC10A3P09131 477 aa13.9□□□□□ -0.18
CDHR3-209ENST00000472116 KRT26Q7Z3Y9 468 aa13.9□□□□□ -0.18
CDHR3-209ENST00000472116 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
CDHR3-209ENST00000472116 RBBP6Q7Z6E9 1792 aaKnown RBP13.89□□□□□ -0.19
CDHR3-209ENST00000472116 RGL2O15211 777 aa13.89□□□□□ -0.19
CDHR3-209ENST00000472116 SLC17A8Q8NDX2 589 aa13.89□□□□□ -0.19
CDHR3-209ENST00000472116 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
CDHR3-209ENST00000472116 ZNF296Q8WUU4 475 aaPredicted RBP13.89□□□□□ -0.19
CDHR3-209ENST00000472116 DCPSQ96C86 337 aaKnown RBP13.89□□□□□ -0.19
CDHR3-209ENST00000472116 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
CDHR3-209ENST00000472116 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
CDHR3-209ENST00000472116 NUP98P52948 1817 aa13.88□□□□□ -0.19
CDHR3-209ENST00000472116 IL13P35225 146 aa13.88□□□□□ -0.19
CDHR3-209ENST00000472116 HIRAP54198 1017 aaPredicted RBP13.88□□□□□ -0.19
CDHR3-209ENST00000472116 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
CDHR3-209ENST00000472116 CRY2Q49AN0 593 aa13.88□□□□□ -0.19
CDHR3-209ENST00000472116 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
CDHR3-209ENST00000472116 TRIOBPQ9H2D6 2365 aa13.88□□□□□ -0.19
CDHR3-209ENST00000472116 HMOX1P09601 288 aa13.87□□□□□ -0.19
CDHR3-209ENST00000472116 INTS3Q68E01 1043 aaKnown RBP13.87□□□□□ -0.19
CDHR3-209ENST00000472116 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
CDHR3-209ENST00000472116 PAPPA2Q9BXP8 1791 aa13.86□□□□□ -0.19
CDHR3-209ENST00000472116 RAD17O75943 681 aa13.86□□□□□ -0.19
CDHR3-209ENST00000472116 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
CDHR3-209ENST00000472116 CRAMP1Q96RY5 1269 aa13.86□□□□□ -0.19
CDHR3-209ENST00000472116 RIC1Q4ADV7 1423 aa13.85□□□□□ -0.19
CDHR3-209ENST00000472116 HOXA10P31260 410 aaPredicted RBP13.85□□□□□ -0.19
CDHR3-209ENST00000472116 MICALL2Q8IY33 904 aa13.85□□□□□ -0.19
CDHR3-209ENST00000472116 CEP290O15078 2479 aa13.85□□□□□ -0.19
CDHR3-209ENST00000472116 ABCC12Q96J65 1359 aa13.84□□□□□ -0.19
CDHR3-209ENST00000472116 TBC1D8O95759 1140 aa13.84□□□□□ -0.19
CDHR3-209ENST00000472116 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
CDHR3-209ENST00000472116 SULF1Q8IWU6 871 aa13.84□□□□□ -0.19
CDHR3-209ENST00000472116 GNAT3A8MTJ3 354 aa13.83□□□□□ -0.2
CDHR3-209ENST00000472116 ADM5C9JUS6 153 aa13.83□□□□□ -0.2
CDHR3-209ENST00000472116 GPR25O00155 361 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms