RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 ZPR1O75312 459 aa24.39■■□□□ 1.49
CHMP2B-204ENST00000472024 PCCAP05165 728 aaPredicted RBP24.39■■□□□ 1.49
CHMP2B-204ENST00000472024 RFC4P35249 363 aa24.39■■□□□ 1.49
CHMP2B-204ENST00000472024 MTX1Q13505 466 aa24.39■■□□□ 1.49
CHMP2B-204ENST00000472024 ANKRD44Q8N8A2 993 aa24.39■■□□□ 1.49
CHMP2B-204ENST00000472024 USPL1Q5W0Q7 1092 aa24.38■■□□□ 1.49
CHMP2B-204ENST00000472024 CEP85Q6P2H3 762 aa24.38■■□□□ 1.49
CHMP2B-204ENST00000472024 SMIM5Q71RC9 77 aa24.38■■□□□ 1.49
CHMP2B-204ENST00000472024 UPF1Q92900 1129 aaKnown RBP eCLIP24.38■■□□□ 1.49
CHMP2B-204ENST00000472024 ARXQ96QS3 562 aa24.38■■□□□ 1.49
CHMP2B-204ENST00000472024 KDM2BQ8NHM5 1336 aa24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 CDHR2Q9BYE9 1310 aa24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 SLC15A2Q16348 729 aa24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 ZBTB38Q8NAP3 1195 aaPredicted RBP24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 KAZALD1Q96I82 304 aa24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 CCDC136Q96JN2 1154 aa24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 ANO8Q9HCE9 1232 aaPredicted RBP24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 SRP68Q9UHB9 627 aaKnown RBP24.37■■□□□ 1.49
CHMP2B-204ENST00000472024 SIRT2Q8IXJ6 389 aa24.36■■□□□ 1.49
CHMP2B-204ENST00000472024 PLA2G12BQ9BX93 195 aa24.36■■□□□ 1.49
CHMP2B-204ENST00000472024 C1orf115Q9H7X2 142 aa24.36■■□□□ 1.49
CHMP2B-204ENST00000472024 TFCP2L1Q9NZI6 479 aa24.36■■□□□ 1.49
CHMP2B-204ENST00000472024 LRRFIP2Q9Y608 721 aaKnown RBP24.36■■□□□ 1.49
CHMP2B-204ENST00000472024 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
CHMP2B-204ENST00000472024 PHF14O94880 888 aa24.35■■□□□ 1.49
CHMP2B-204ENST00000472024 GYS1P13807 737 aa24.34■■□□□ 1.49
CHMP2B-204ENST00000472024 RABL6Q3YEC7 729 aaPredicted RBP24.34■■□□□ 1.49
CHMP2B-204ENST00000472024 B4GALNT3Q6L9W6 998 aa24.34■■□□□ 1.49
CHMP2B-204ENST00000472024 SUCLG2Q96I99 432 aa24.34■■□□□ 1.49
CHMP2B-204ENST00000472024 STK32BQ9NY57 414 aa24.34■■□□□ 1.49
CHMP2B-204ENST00000472024 NIP7Q9Y221 180 aaKnown RBP eCLIP24.34■■□□□ 1.49
CHMP2B-204ENST00000472024 GPTP24298 496 aa24.33■■□□□ 1.49
CHMP2B-204ENST00000472024 ATP8B2P98198 1209 aa24.33■■□□□ 1.49
CHMP2B-204ENST00000472024 UBE3BQ7Z3V4 1068 aa24.33■■□□□ 1.49
CHMP2B-204ENST00000472024 COL23A1Q86Y22 540 aaPredicted RBP24.33■■□□□ 1.49
CHMP2B-204ENST00000472024 RWDD1Q9H446 243 aaPredicted RBP24.33■■□□□ 1.49
CHMP2B-204ENST00000472024 NTSR2O95665 410 aa24.32■■□□□ 1.48
CHMP2B-204ENST00000472024 TBC1D9BQ66K14 1250 aa24.32■■□□□ 1.48
CHMP2B-204ENST00000472024 IGHDP01880 384 aa24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 SUSD4Q5VX71 490 aa24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 CENPQQ7L2Z9 268 aaPredicted RBP24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 PPP1R42Q7Z4L9 355 aa24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 SSH3Q8TE77 659 aa24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 UTP14AQ9BVJ6 771 aaKnown RBP24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 LAMB2P55268 1798 aa24.31■■□□□ 1.48
CHMP2B-204ENST00000472024 POLA2Q14181 598 aa24.3■■□□□ 1.48
CHMP2B-204ENST00000472024 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
CHMP2B-204ENST00000472024 TM4SF1P30408 202 aa24.29■■□□□ 1.48
CHMP2B-204ENST00000472024 FOXO4P98177 505 aa24.29■■□□□ 1.48
CHMP2B-204ENST00000472024 BICC1Q9H694 974 aaKnown RBP24.29■■□□□ 1.48
CHMP2B-204ENST00000472024 SH3TC1Q8TE82 1336 aa24.29■■□□□ 1.48
CHMP2B-204ENST00000472024 RIC1Q4ADV7 1423 aa24.28■■□□□ 1.48
CHMP2B-204ENST00000472024 HMMRO75330 724 aa24.28■■□□□ 1.48
CHMP2B-204ENST00000472024 EPHA10Q5JZY3 1008 aa24.28■■□□□ 1.48
CHMP2B-204ENST00000472024 SMC5Q8IY18 1101 aa24.28■■□□□ 1.48
CHMP2B-204ENST00000472024 SETDB2Q96T68 719 aa24.28■■□□□ 1.48
CHMP2B-204ENST00000472024 TRMT112Q9UI30 125 aaKnown RBP24.28■■□□□ 1.48
CHMP2B-204ENST00000472024 NFIXQ14938 502 aa24.27■■□□□ 1.48
CHMP2B-204ENST00000472024 SLC10A5Q5PT55 438 aa24.27■■□□□ 1.48
CHMP2B-204ENST00000472024 FAM89AQ96GI7 184 aa24.27■■□□□ 1.48
CHMP2B-204ENST00000472024 NYXQ9GZU5 481 aa24.27■■□□□ 1.48
CHMP2B-204ENST00000472024 PNMA6EA0A0J9YXQ4 647 aa24.26■■□□□ 1.47
CHMP2B-204ENST00000472024 CSF1RP07333 972 aa24.26■■□□□ 1.47
CHMP2B-204ENST00000472024 HSP90B1P14625 803 aaKnown RBP24.26■■□□□ 1.47
CHMP2B-204ENST00000472024 NLGN1Q8N2Q7 840 aa24.26■■□□□ 1.47
CHMP2B-204ENST00000472024 DCTPP1Q9H773 170 aa24.26■■□□□ 1.47
CHMP2B-204ENST00000472024 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
CHMP2B-204ENST00000472024 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
CHMP2B-204ENST00000472024 IRS4O14654 1257 aaPredicted RBP24.24■■□□□ 1.47
CHMP2B-204ENST00000472024 GCC1Q96CN9 775 aa24.24■■□□□ 1.47
CHMP2B-204ENST00000472024 PDE8AO60658 829 aa24.23■■□□□ 1.47
CHMP2B-204ENST00000472024 JARID2Q92833 1246 aaPredicted RBP24.23■■□□□ 1.47
CHMP2B-204ENST00000472024 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
CHMP2B-204ENST00000472024 MYH3P11055 1940 aa24.22■■□□□ 1.47
CHMP2B-204ENST00000472024 SRGAP3O43295 1099 aa24.22■■□□□ 1.47
CHMP2B-204ENST00000472024 SYNE4Q8N205 404 aa24.22■■□□□ 1.47
CHMP2B-204ENST00000472024 NOP58Q9Y2X3 529 aaKnown RBP24.22■■□□□ 1.47
CHMP2B-204ENST00000472024 POLRMTO00411 1230 aaKnown RBP24.21■■□□□ 1.47
CHMP2B-204ENST00000472024 RFX5P48382 616 aaPredicted RBP24.21■■□□□ 1.47
CHMP2B-204ENST00000472024 TPTE2Q6XPS3 522 aa24.21■■□□□ 1.47
CHMP2B-204ENST00000472024 SLC16A10Q8TF71 515 aa24.21■■□□□ 1.47
CHMP2B-204ENST00000472024 CTSWP56202 376 aa24.2■■□□□ 1.46
CHMP2B-204ENST00000472024 DDR1Q08345 913 aa24.2■■□□□ 1.46
CHMP2B-204ENST00000472024 LMBR1LQ6UX01 489 aa24.2■■□□□ 1.46
CHMP2B-204ENST00000472024 NBPF5PQ86XG9 351 aaPredicted RBP24.2■■□□□ 1.46
CHMP2B-204ENST00000472024 ABCC12Q96J65 1359 aa24.19■■□□□ 1.46
CHMP2B-204ENST00000472024 BICDL1Q6ZP65 573 aa24.19■■□□□ 1.46
CHMP2B-204ENST00000472024 TTLL11Q8NHH1 800 aa24.19■■□□□ 1.46
CHMP2B-204ENST00000472024 COPRSQ9NQ92 184 aa24.19■■□□□ 1.46
CHMP2B-204ENST00000472024 CASZ1Q86V15 1759 aa24.19■■□□□ 1.46
CHMP2B-204ENST00000472024 ERFEQ4G0M1 354 aa24.18■■□□□ 1.46
CHMP2B-204ENST00000472024 RTL5Q5HYW3 569 aaPredicted RBP24.18■■□□□ 1.46
CHMP2B-204ENST00000472024 SF3B3Q15393 1217 aaKnown RBP24.17■■□□□ 1.46
CHMP2B-204ENST00000472024 NUTM1Q86Y26 1132 aa24.17■■□□□ 1.46
CHMP2B-204ENST00000472024 SERPINB2P05120 415 aa24.16■■□□□ 1.46
CHMP2B-204ENST00000472024 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
CHMP2B-204ENST00000472024 LRP5O75197 1615 aa24.16■■□□□ 1.46
CHMP2B-204ENST00000472024 HCLS1P14317 486 aaPredicted RBP24.15■■□□□ 1.46
CHMP2B-204ENST00000472024 PTPN12Q05209 780 aaKnown RBP24.15■■□□□ 1.46
CHMP2B-204ENST00000472024 CNBD1Q8NA66 436 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms