RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.02
VAMP3-202ENST00000470357 GOLGB1Q14789 3259 aaKnown RBP8.7□□□□□ -1.02
VAMP3-202ENST00000470357 ZBTB7AO95365 584 aa8.7□□□□□ -1.02
VAMP3-202ENST00000470357 ATP6V1AP38606 617 aa8.7□□□□□ -1.02
VAMP3-202ENST00000470357 C1QTNF8P60827 252 aa8.7□□□□□ -1.02
VAMP3-202ENST00000470357 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
VAMP3-202ENST00000470357 SYT17Q9BSW7 474 aa8.7□□□□□ -1.02
VAMP3-202ENST00000470357 RGPD5Q99666 1765 aa8.7□□□□□ -1.02
VAMP3-202ENST00000470357 PARP4Q9UKK3 1724 aaKnown RBP8.69□□□□□ -1.02
VAMP3-202ENST00000470357 RGPD3A6NKT7 1758 aaPredicted RBP8.69□□□□□ -1.02
VAMP3-202ENST00000470357 COL18A1P39060 1754 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 RGPD4Q7Z3J3 1758 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 KDM4AO75164 1064 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 ZPR1O75312 459 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 FBLN1P23142 703 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
VAMP3-202ENST00000470357 HSP90AB2PQ58FF8 381 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 SCUBE3Q8IX30 993 aa8.69□□□□□ -1.02
VAMP3-202ENST00000470357 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
VAMP3-202ENST00000470357 SENP3-EIF4A1A0A087X0R7 540 aa8.68□□□□□ -1.02
VAMP3-202ENST00000470357 NR1I2O75469 434 aa8.68□□□□□ -1.02
VAMP3-202ENST00000470357 MS4A1P11836 297 aa8.68□□□□□ -1.02
VAMP3-202ENST00000470357 FHDC1Q9C0D6 1143 aaPredicted RBP8.68□□□□□ -1.02
VAMP3-202ENST00000470357 KDRP35968 1356 aa8.68□□□□□ -1.02
VAMP3-202ENST00000470357 OVOS2A0A0G2JMS6 1433 aa8.68□□□□□ -1.02
VAMP3-202ENST00000470357 BCL9O00512 1426 aa8.68□□□□□ -1.02
VAMP3-202ENST00000470357 APAF1O14727 1248 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 LMOD3Q0VAK6 560 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 CCDC27Q2M243 656 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 MORN1Q5T089 497 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 SBF2Q86WG5 1849 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 IGSF1Q8N6C5 1336 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 MARCH10Q8NA82 808 aaPredicted RBP8.67□□□□□ -1.02
VAMP3-202ENST00000470357 DLG5Q8TDM6 1919 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 RSPH6AQ9H0K4 717 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 PLEKHG2Q9H7P9 1386 aa8.67□□□□□ -1.02
VAMP3-202ENST00000470357 RGPD2P0DJD1 1756 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 CRB1P82279 1406 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 CCDC146Q8IYE0 955 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 PLEKHF1Q96S99 279 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 SLC27A5Q9Y2P5 690 aa8.66□□□□□ -1.02
VAMP3-202ENST00000470357 NCAPD2Q15021 1401 aa8.65□□□□□ -1.02
VAMP3-202ENST00000470357 TLL1O43897 1013 aa8.65□□□□□ -1.02
VAMP3-202ENST00000470357 CALD1Q05682 793 aaKnown RBP8.65□□□□□ -1.02
VAMP3-202ENST00000470357 DDB1Q16531 1140 aa8.65□□□□□ -1.02
VAMP3-202ENST00000470357 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
VAMP3-202ENST00000470357 HLA-CQ95604 372 aa8.65□□□□□ -1.02
VAMP3-202ENST00000470357 LRRC37A3O60309 1634 aa8.65□□□□□ -1.03
VAMP3-202ENST00000470357 HMOX1P09601 288 aa8.64□□□□□ -1.03
VAMP3-202ENST00000470357 TMPOP42166 694 aaKnown RBP8.64□□□□□ -1.03
VAMP3-202ENST00000470357 NFE2L2Q16236 605 aa8.64□□□□□ -1.03
VAMP3-202ENST00000470357 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
VAMP3-202ENST00000470357 ANKRD24Q8TF21 1146 aa8.64□□□□□ -1.03
VAMP3-202ENST00000470357 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
VAMP3-202ENST00000470357 LTV1Q96GA3 475 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-202ENST00000470357 MTFR1LQ9H019 292 aa8.64□□□□□ -1.03
VAMP3-202ENST00000470357 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
VAMP3-202ENST00000470357 MAP3K5Q99683 1374 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 IL16Q14005 1332 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 ZNF521Q96K83 1311 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 CSB-PGBD3P0DP91 1061 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 USP46P62068 366 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 WWC1Q8IX03 1113 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 GAS2L2Q8NHY3 880 aa8.63□□□□□ -1.03
VAMP3-202ENST00000470357 CHD4Q14839 1912 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 E9PSI1 815 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 HOXA2O43364 376 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 HTATSF1O43719 755 aaKnown RBP8.62□□□□□ -1.03
VAMP3-202ENST00000470357 RIPK4P57078 832 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 GUCA2AQ02747 115 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 STK32BQ9NY57 414 aa8.62□□□□□ -1.03
VAMP3-202ENST00000470357 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
VAMP3-202ENST00000470357 WDR17Q8IZU2 1322 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 NDUFV2P19404 249 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 NEUROD2Q15784 382 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 AEBP1Q8IUX7 1158 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 RAPGEF4Q8WZA2 1011 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 ARXQ96QS3 562 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 SPSB2Q99619 263 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 KDM4CQ9H3R0 1056 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
VAMP3-202ENST00000470357 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
VAMP3-202ENST00000470357 PLEKHO1Q53GL0 409 aaPredicted RBP8.6□□□□□ -1.03
VAMP3-202ENST00000470357 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 RTF1Q92541 710 aaKnown RBP8.6□□□□□ -1.03
VAMP3-202ENST00000470357 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 PHACTR3Q96KR7 559 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms