RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ERFEQ4G0M1 354 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 STYK1Q6J9G0 422 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 ZNF428Q96B54 188 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 MASTLQ96GX5 879 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 ISCA1Q9BUE6 129 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 WWC3Q9ULE0 1092 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 ARFGEF1Q9Y6D6 1849 aa18.94■□□□□ 0.62
TMEM39A-205ENST00000468676 NUTM1Q86Y26 1132 aa18.93■□□□□ 0.62
TMEM39A-205ENST00000468676 CNKSR1Q969H4 720 aa18.93■□□□□ 0.62
TMEM39A-205ENST00000468676 ZNF622Q969S3 477 aaKnown RBP eCLIP18.93■□□□□ 0.62
TMEM39A-205ENST00000468676 CDCA7LQ96GN5 454 aa18.93■□□□□ 0.62
TMEM39A-205ENST00000468676 NPR1P16066 1061 aa18.92■□□□□ 0.62
TMEM39A-205ENST00000468676 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
TMEM39A-205ENST00000468676 FLIIQ13045 1269 aa18.92■□□□□ 0.62
TMEM39A-205ENST00000468676 SLC10A5Q5PT55 438 aa18.92■□□□□ 0.62
TMEM39A-205ENST00000468676 METTL22Q9BUU2 404 aaPredicted RBP18.92■□□□□ 0.62
TMEM39A-205ENST00000468676 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
TMEM39A-205ENST00000468676 PI4KAP2A4QPH2 592 aa18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 NEXNQ0ZGT2 675 aa18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 PI4KAP1Q8N8J0 262 aa18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 CCDC191Q8NCU4 936 aa18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 MAP3K2Q9Y2U5 619 aa18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 SH3TC1Q8TE82 1336 aa18.91■□□□□ 0.62
TMEM39A-205ENST00000468676 ATP5J2-PTCD1G3V325 749 aa18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 FKBP5Q13451 457 aaPredicted RBP18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 CRY2Q49AN0 593 aa18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 G2E3Q7L622 706 aa18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 NLRP3Q96P20 1036 aa18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 MYD88Q99836 296 aa18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 ABCC12Q96J65 1359 aa18.9■□□□□ 0.62
TMEM39A-205ENST00000468676 COL11A2P13942 1736 aaPredicted RBP18.89■□□□□ 0.61
TMEM39A-205ENST00000468676 HSP90B1P14625 803 aaKnown RBP18.89■□□□□ 0.61
TMEM39A-205ENST00000468676 ALDH1B1P30837 517 aa18.89■□□□□ 0.61
TMEM39A-205ENST00000468676 YY1P25490 414 aa18.88■□□□□ 0.61
TMEM39A-205ENST00000468676 ARHGAP27Q6ZUM4 889 aa18.88■□□□□ 0.61
TMEM39A-205ENST00000468676 RPGRQ92834 1020 aaKnown RBP18.88■□□□□ 0.61
TMEM39A-205ENST00000468676 CWC25Q9NXE8 425 aaPredicted RBP18.88■□□□□ 0.61
TMEM39A-205ENST00000468676 ADCY9O60503 1353 aa18.88■□□□□ 0.61
TMEM39A-205ENST00000468676 HOXA10P31260 410 aaPredicted RBP18.87■□□□□ 0.61
TMEM39A-205ENST00000468676 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
TMEM39A-205ENST00000468676 ZBTB38Q8NAP3 1195 aaPredicted RBP18.87■□□□□ 0.61
TMEM39A-205ENST00000468676 ALDH1L2Q3SY69 923 aa18.86■□□□□ 0.61
TMEM39A-205ENST00000468676 PRPF40BQ6NWY9 871 aaKnown RBP18.86■□□□□ 0.61
TMEM39A-205ENST00000468676 DNAAF4Q8WXU2 420 aa18.86■□□□□ 0.61
TMEM39A-205ENST00000468676 RBM17Q96I25 401 aaKnown RBP18.86■□□□□ 0.61
TMEM39A-205ENST00000468676 FAM89AQ96GI7 184 aa18.85■□□□□ 0.61
TMEM39A-205ENST00000468676 CRAMP1Q96RY5 1269 aa18.85■□□□□ 0.61
TMEM39A-205ENST00000468676 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
TMEM39A-205ENST00000468676 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
TMEM39A-205ENST00000468676 ZBED9Q6R2W3 1325 aa18.84■□□□□ 0.61
TMEM39A-205ENST00000468676 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
TMEM39A-205ENST00000468676 HCLS1P14317 486 aaPredicted RBP18.84■□□□□ 0.61
TMEM39A-205ENST00000468676 C21orf2O43822 256 aa18.83■□□□□ 0.6
TMEM39A-205ENST00000468676 IGKV5-2P06315 115 aa18.83■□□□□ 0.6
TMEM39A-205ENST00000468676 SYNE4Q8N205 404 aa18.83■□□□□ 0.6
TMEM39A-205ENST00000468676 MRPL50Q8N5N7 158 aaKnown RBP18.83■□□□□ 0.6
TMEM39A-205ENST00000468676 LINS1Q8NG48 757 aa18.83■□□□□ 0.6
TMEM39A-205ENST00000468676 SSH1Q8WYL5 1049 aa18.83■□□□□ 0.6
TMEM39A-205ENST00000468676 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
TMEM39A-205ENST00000468676 PTPRCP08575 1304 aa18.82■□□□□ 0.6
TMEM39A-205ENST00000468676 NEURL1BA8MQ27 555 aa18.82■□□□□ 0.6
TMEM39A-205ENST00000468676 IRS4O14654 1257 aaPredicted RBP18.82■□□□□ 0.6
TMEM39A-205ENST00000468676 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
TMEM39A-205ENST00000468676 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
TMEM39A-205ENST00000468676 C7orf43Q8WVR3 580 aa18.81■□□□□ 0.6
TMEM39A-205ENST00000468676 GCKRQ14397 625 aa18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 SF3B3Q15393 1217 aaKnown RBP18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 CWF19L2Q2TBE0 894 aaKnown RBP18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 RTL5Q5HYW3 569 aaPredicted RBP18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 DDX46Q7L014 1031 aaKnown RBP18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 SMC4Q9NTJ3 1288 aa18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 LAMB2P55268 1798 aa18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 DDX60Q8IY21 1712 aaKnown RBP18.8■□□□□ 0.6
TMEM39A-205ENST00000468676 CDHR2Q9BYE9 1310 aa18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 F6X3S4 739 aa18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 PDE8AO60658 829 aa18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 BBOX1O75936 387 aa18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 BRPF1P55201 1214 aaPredicted RBP18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 CCDC93Q567U6 631 aa18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 RTKN2Q8IZC4 609 aa18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 TMX4Q9H1E5 349 aaPredicted RBP18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
TMEM39A-205ENST00000468676 LTBP3Q9NS15 1303 aa18.78■□□□□ 0.6
TMEM39A-205ENST00000468676 H7C1W4 665 aa18.78■□□□□ 0.6
TMEM39A-205ENST00000468676 BEND3Q5T5X7 828 aa18.78■□□□□ 0.6
TMEM39A-205ENST00000468676 SBF1O95248 1867 aa18.77■□□□□ 0.6
TMEM39A-205ENST00000468676 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
TMEM39A-205ENST00000468676 ALDH1L1O75891 902 aa18.77■□□□□ 0.6
TMEM39A-205ENST00000468676 LMNB1P20700 586 aa18.77■□□□□ 0.6
TMEM39A-205ENST00000468676 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
TMEM39A-205ENST00000468676 ABCC4O15439 1325 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 NFKBIEO00221 500 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 PPEF1O14829 653 aaPredicted RBP18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 GRAPQ13588 217 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 CCDC152Q4G0S7 254 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 C9orf131Q5VYM1 1079 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms