RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, human

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-209	ENST00000467908	TBC1D2B	Q9UPU7	963 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	SLC3A2	P08195	630 aa	Known RBP	13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	UBE4A	Q14139	1066 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	PPL	O60437	1756 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	TMEM131L	A2VDJ0	1609 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	C3	P01024	1663 aa		13.2	□□□□□ -0.3
PDXK-209	ENST00000467908	ATP2B3	Q16720	1220 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	DHX8	Q14562	1220 aa	Known RBP	13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	UBA5	Q9GZZ9	404 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	SPATA31D1	Q6ZQQ2	1576 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	TRAK2	O60296	914 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	PCDH11X	Q9BZA7	1347 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	PCDH11Y	Q9BZA8	1340 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	SNRPA1	P09661	255 aa	Known RBP	13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	KRT24	Q2M2I5	525 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	MAP3K5	Q99683	1374 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	MACROD2	A1Z1Q3	448 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	ADGRL3	Q9HAR2	1447 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	SH3BP5	O60239	455 aa		13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	DBF4	Q9UBU7	674 aa	Predicted RBP	13.19	□□□□□ -0.3
PDXK-209	ENST00000467908	ZWINT	O95229	277 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	RUFY2	Q8WXA3	655 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	PDE3A	Q14432	1141 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	MPND	Q8N594	471 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	LGR6	Q9HBX8	967 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	CHPF2	Q9P2E5	772 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	ZNF652	Q9Y2D9	606 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	FSD1	Q9BTV5	496 aa		13.18	□□□□□ -0.3
PDXK-209	ENST00000467908	ATP5J2-PTCD1	G3V325	749 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	ERLIN2	O94905	339 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	DNA2	P51530	1060 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	MVP	Q14764	893 aa	Known RBP	13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	LRSAM1	Q6UWE0	723 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	SETBP1	Q9Y6X0	1596 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	RNMT	O43148	476 aa	Known RBP	13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	CCDC57	Q2TAC2	916 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	SMC3	Q9UQE7	1217 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	SPC24	Q8NBT2	197 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	TRIM5	Q9C035	493 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	HYPK	Q9NX55	129 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	EIF3J	O75822	258 aa	Known RBP	13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	C8orf58	Q8NAV2	365 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	JARID2	Q92833	1246 aa	Predicted RBP	13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	MAP3K2	Q9Y2U5	619 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	C20orf194	Q5TEA3	1177 aa		13.17	□□□□□ -0.3
PDXK-209	ENST00000467908	NOP2	P46087	812 aa	Known RBP	13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	DCAF5	Q96JK2	942 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	GOPC	Q9HD26	462 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	NPC1L1	Q9UHC9	1359 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	BIRC2	Q13490	618 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	SOGA3	Q5TF21	947 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	ATP2C2	O75185	946 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	ABCF2	Q9UG63	623 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	MROH1	Q8NDA8	1641 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	RFC4	P35249	363 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	FLII	Q13045	1269 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	SRGAP3	O43295	1099 aa		13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	CAVIN1	Q6NZI2	390 aa	Known RBP	13.16	□□□□□ -0.3
PDXK-209	ENST00000467908	CCDC102A	Q96A19	550 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	QTRT2	Q9H974	415 aa	Known RBP	13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	KIF20A	O95235	890 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	PRIM1	P49642	420 aa	Known RBP	13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	OTUD6B	Q8N6M0	293 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	SSX2IP	Q9Y2D8	614 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	CDC42BPG	Q6DT37	1551 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	DPH6	Q7L8W6	267 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	ADAMTS13	Q76LX8	1427 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	RAI14	Q9P0K7	980 aa		13.15	□□□□□ -0.3
PDXK-209	ENST00000467908	PI4KAP2	A4QPH2	592 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	PI4KAP1	Q8N8J0	262 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	CERK	Q8TCT0	537 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	FERMT2	Q96AC1	680 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	PUF60	Q9UHX1	559 aa	Known RBP	13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	TXLNA	P40222	546 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	ALDH1L2	Q3SY69	923 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	RBM26	Q5T8P6	1007 aa	Known RBP	13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	ARHGEF25	Q86VW2	580 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	CCDC73	Q6ZRK6	1079 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	PPP4R3A	Q6IN85	833 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	GNL3L	Q9NVN8	582 aa	Known RBP	13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	TRMT112	Q9UI30	125 aa	Known RBP	13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	ESPN	B1AK53	854 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	PPP4R4	Q6NUP7	873 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	SDF4	Q9BRK5	362 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	FAM182B	Q5T319	152 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	DNAAF4	Q8WXU2	420 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	VWDE	Q8N2E2	1590 aa		13.14	□□□□□ -0.31
PDXK-209	ENST00000467908	RNF20	Q5VTR2	975 aa		13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	NOP9	Q86U38	636 aa	Known RBP	13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	TSPYL6	Q8N831	410 aa		13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	LRRFIP2	Q9Y608	721 aa	Known RBP	13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	SPATA31A3	Q5VYP0	1347 aa		13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	ANKAR	Q7Z5J8	1434 aa		13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	ZNF408	Q9H9D4	720 aa		13.13	□□□□□ -0.31
PDXK-209	ENST00000467908	MMRN2	Q9H8L6	949 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms