RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 BECN2A8MW95 431 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 TNNT1P13805 278 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 ZNF165P49910 485 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 DNAJC2Q99543 621 aaKnown RBP16.06■□□□□ 0.16
MMP11-206ENST00000465385 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 AOX1Q06278 1338 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 RNF20Q5VTR2 975 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
MMP11-206ENST00000465385 RIMS1Q86UR5 1692 aaKnown RBP16.06■□□□□ 0.16
MMP11-206ENST00000465385 DLC1Q96QB1 1528 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 IGSF1Q8N6C5 1336 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 PLEKHG3A1L390 1219 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 JAK2O60674 1132 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 PDCP20941 246 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 PSMA5P28066 241 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 NAA30Q147X3 362 aaPredicted RBP16.05■□□□□ 0.16
MMP11-206ENST00000465385 ZNF771Q7L3S4 317 aaPredicted RBP16.05■□□□□ 0.16
MMP11-206ENST00000465385 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 PRDM4Q9UKN5 801 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 LTKP29376 864 aa16.05■□□□□ 0.16
MMP11-206ENST00000465385 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
MMP11-206ENST00000465385 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
MMP11-206ENST00000465385 MYL6BP14649 208 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
MMP11-206ENST00000465385 TAF6LQ9Y6J9 622 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 ERCC4Q92889 916 aaPredicted RBP16.04■□□□□ 0.16
MMP11-206ENST00000465385 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 BEND3Q5T5X7 828 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 EVI5LQ96CN4 794 aa16.04■□□□□ 0.16
MMP11-206ENST00000465385 TPM3P06753 285 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 PROSER3Q2NL68 480 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 SLC27A2O14975 620 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 NR1I2O75469 434 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 POLA2Q14181 598 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 ZSWIM6Q9HCJ5 1215 aa16.03■□□□□ 0.16
MMP11-206ENST00000465385 OVOS2A0A0J9YW53 1432 aa16.02■□□□□ 0.16
MMP11-206ENST00000465385 OVOS2Q6IE36 1432 aa16.02■□□□□ 0.16
MMP11-206ENST00000465385 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.16
MMP11-206ENST00000465385 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.16
MMP11-206ENST00000465385 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
MMP11-206ENST00000465385 RIC3Q7Z5B4 369 aa16.02■□□□□ 0.16
MMP11-206ENST00000465385 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.16
MMP11-206ENST00000465385 ST3GAL1Q11201 340 aa16.02■□□□□ 0.15
MMP11-206ENST00000465385 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.15
MMP11-206ENST00000465385 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
MMP11-206ENST00000465385 BRF1Q92994 677 aa16.01■□□□□ 0.15
MMP11-206ENST00000465385 SCAND2PQ9GZW5 306 aaPredicted RBP16.01■□□□□ 0.15
MMP11-206ENST00000465385 SETD1BQ9UPS6 1966 aaKnown RBP16.01■□□□□ 0.15
MMP11-206ENST00000465385 TTC41PQ6P2S7 1318 aa16.01■□□□□ 0.15
MMP11-206ENST00000465385 EAF2Q96CJ1 260 aaPredicted RBP16.01■□□□□ 0.15
MMP11-206ENST00000465385 EIF4A1P60842 406 aaKnown RBP16.01■□□□□ 0.15
MMP11-206ENST00000465385 FUCA2Q9BTY2 467 aa16.01■□□□□ 0.15
MMP11-206ENST00000465385 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
MMP11-206ENST00000465385 TTC21AQ8NDW8 1320 aa16■□□□□ 0.15
MMP11-206ENST00000465385 RICTORQ6R327 1708 aa16■□□□□ 0.15
MMP11-206ENST00000465385 ERC1Q8IUD2 1116 aa16■□□□□ 0.15
MMP11-206ENST00000465385 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
MMP11-206ENST00000465385 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
MMP11-206ENST00000465385 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
MMP11-206ENST00000465385 CHGBP05060 677 aa16■□□□□ 0.15
MMP11-206ENST00000465385 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
MMP11-206ENST00000465385 ARID5BQ14865 1188 aa16■□□□□ 0.15
MMP11-206ENST00000465385 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
MMP11-206ENST00000465385 ZNF589Q86UQ0 364 aaPredicted RBP15.99■□□□□ 0.15
MMP11-206ENST00000465385 SYTL4Q96C24 671 aaPredicted RBP15.99■□□□□ 0.15
MMP11-206ENST00000465385 DBF4Q9UBU7 674 aaPredicted RBP15.99■□□□□ 0.15
MMP11-206ENST00000465385 SUCLG2Q96I99 432 aa15.99■□□□□ 0.15
MMP11-206ENST00000465385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
MMP11-206ENST00000465385 NECTIN1Q15223 517 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 NBPF6Q5VWK0 638 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 NBPF4Q96M43 638 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 DDX19AQ9NUU7 478 aaKnown RBP15.98■□□□□ 0.15
MMP11-206ENST00000465385 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 ZSCAN20P17040 1043 aaPredicted RBP15.98■□□□□ 0.15
MMP11-206ENST00000465385 ZNF75DP51815 510 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 ANKRD1Q15327 319 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 CCDC73Q6ZRK6 1079 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 DMTNQ08495 405 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 ZSCAN25Q6NSZ9 544 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
MMP11-206ENST00000465385 ME1P48163 572 aa15.97■□□□□ 0.15
MMP11-206ENST00000465385 THEMISQ8N1K5 641 aaPredicted RBP15.97■□□□□ 0.15
MMP11-206ENST00000465385 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
MMP11-206ENST00000465385 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
MMP11-206ENST00000465385 SEC62Q99442 399 aaKnown RBP15.97■□□□□ 0.15
MMP11-206ENST00000465385 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
MMP11-206ENST00000465385 Q6ZUG5 572 aa15.97■□□□□ 0.15
MMP11-206ENST00000465385 NEUROD6Q96NK8 337 aa15.97■□□□□ 0.15
MMP11-206ENST00000465385 HIP1O00291 1037 aa15.96■□□□□ 0.15
MMP11-206ENST00000465385 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
MMP11-206ENST00000465385 CHST3Q7LGC8 479 aa15.96■□□□□ 0.15
MMP11-206ENST00000465385 KINO60870 393 aaKnown RBP15.96■□□□□ 0.15
MMP11-206ENST00000465385 GRM8O00222 908 aa15.96■□□□□ 0.14
MMP11-206ENST00000465385 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.14
MMP11-206ENST00000465385 SF3A1Q15459 793 aaKnown RBP15.96■□□□□ 0.14
MMP11-206ENST00000465385 SDF4Q9BRK5 362 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms