RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
USP48-206ENST00000464577 DIP2AQ14689 1571 aa8.66□□□□□ -1.02
USP48-206ENST00000464577 MED1Q15648 1581 aaPredicted RBP8.66□□□□□ -1.02
USP48-206ENST00000464577 HIP1O00291 1037 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
USP48-206ENST00000464577 ZKSCAN1P17029 563 aaPredicted RBP8.65□□□□□ -1.02
USP48-206ENST00000464577 PSMA5P28066 241 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 PTH1RQ03431 593 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 ANKRD1Q15327 319 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 TAF7Q15545 349 aaPredicted RBP8.65□□□□□ -1.02
USP48-206ENST00000464577 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 LARP1BQ659C4 914 aaKnown RBP8.65□□□□□ -1.02
USP48-206ENST00000464577 LUZP1Q86V48 1076 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 GPATCH3Q96I76 525 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.02
USP48-206ENST00000464577 USP54Q70EL1 1684 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 NEMFO60524 1076 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 HOXB7P09629 217 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 TNNT1P13805 278 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 ANO6Q4KMQ2 910 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 HDGFL1Q5TGJ6 251 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 SARM1Q6SZW1 724 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 CDC37L1Q7L3B6 337 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 EVI5LQ96CN4 794 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 ECHDC1Q9NTX5 307 aa8.65□□□□□ -1.03
USP48-206ENST00000464577 DDX41Q9UJV9 622 aaKnown RBP8.65□□□□□ -1.03
USP48-206ENST00000464577 BEND3Q5T5X7 828 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 CREB3L3Q68CJ9 461 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 ERC1Q8IUD2 1116 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 CCDC112Q8NEF3 446 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 DACT1Q9NYF0 836 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 PODXL2Q9NZ53 605 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 TPCN1Q9ULQ1 816 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 ADAMTS13Q76LX8 1427 aa8.64□□□□□ -1.03
USP48-206ENST00000464577 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 LRMPQ12912 555 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 DRC7Q8IY82 874 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 CLASRPQ8N2M8 674 aaKnown RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 NECAB1Q8N987 351 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 IL17REQ8NFR9 667 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 MAP4K1Q92918 833 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 SPATA32Q96LK8 384 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 C16orf45Q96MC5 204 aaPredicted RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 TRIM5Q9C035 493 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 RBM8AQ9Y5S9 174 aaKnown RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 MORC2Q9Y6X9 1032 aaPredicted RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 JCADQ9P266 1359 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 DIP2BQ9P265 1576 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 GOLGA6L4A6NEF3 574 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 AMPHP49418 695 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 RBM6P78332 1123 aaKnown RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 CAMK4Q16566 473 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 LEO1Q8WVC0 666 aaPredicted RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
USP48-206ENST00000464577 PHAXQ9H814 394 aaKnown RBP8.63□□□□□ -1.03
USP48-206ENST00000464577 SLC27A2O14975 620 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 NBPF7P0C2Y1 421 aaPredicted RBP8.62□□□□□ -1.03
USP48-206ENST00000464577 ZNF165P49910 485 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 FAM193AP78312 1265 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 TPD52L1Q16890 204 aaPredicted RBP8.62□□□□□ -1.03
USP48-206ENST00000464577 RNF20Q5VTR2 975 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 CKAP2LQ8IYA6 745 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 ZNF397Q8NF99 534 aaPredicted RBP8.62□□□□□ -1.03
USP48-206ENST00000464577 KIF18AQ8NI77 898 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 CACTINQ8WUQ7 758 aaKnown RBP8.62□□□□□ -1.03
USP48-206ENST00000464577 MRFAP1L1Q96HT8 127 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 KCND1Q9NSA2 647 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 CLIP2Q9UDT6 1046 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 HDAC5Q9UQL6 1122 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 CEMIPQ8WUJ3 1361 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 NPHP4O75161 1426 aaPredicted RBP8.62□□□□□ -1.03
USP48-206ENST00000464577 UBR1Q8IWV7 1749 aa8.62□□□□□ -1.03
USP48-206ENST00000464577 MED23Q9ULK4 1368 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 RPS6KB1P23443 525 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 OS9Q13438 667 aaPredicted RBP8.61□□□□□ -1.03
USP48-206ENST00000464577 TSGA10IPQ3SY00 556 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 CEP135Q66GS9 1140 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 BLOC1S2Q6QNY1 142 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 HMG20BQ9P0W2 317 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 NRBP1Q9UHY1 535 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 TAOK2Q9UL54 1235 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 SLIT1O75093 1534 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 CTAGE5O15320 804 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 IFIT2P09913 472 aaKnown RBP8.61□□□□□ -1.03
USP48-206ENST00000464577 NYAP1Q6ZVC0 841 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 FERMT3Q86UX7 667 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 CREBRFQ8IUR6 639 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 PIP4P2Q8N4L2 257 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 FAM53CQ9NYF3 392 aa8.61□□□□□ -1.03
USP48-206ENST00000464577 MARF1Q9Y4F3 1742 aaKnown RBP8.61□□□□□ -1.03
USP48-206ENST00000464577 ADCY9O60503 1353 aa8.6□□□□□ -1.03
USP48-206ENST00000464577 PLEKHG1Q9ULL1 1385 aa8.6□□□□□ -1.03
USP48-206ENST00000464577 KIF2AO00139 706 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms