RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 TRIM28Q13263 835 aaKnown RBP33.47■■■□□ 2.95
SURF1-203ENST00000463965 CNKSR1Q969H4 720 aa33.47■■■□□ 2.95
SURF1-203ENST00000463965 ANKRD36CQ5JPF3 1778 aa33.47■■■□□ 2.95
SURF1-203ENST00000463965 KLRG2A4D1S0 409 aaPredicted RBP33.46■■■□□ 2.95
SURF1-203ENST00000463965 PI4KAP2A4QPH2 592 aa33.46■■■□□ 2.95
SURF1-203ENST00000463965 NPR1P16066 1061 aa33.46■■■□□ 2.95
SURF1-203ENST00000463965 G2E3Q7L622 706 aa33.46■■■□□ 2.95
SURF1-203ENST00000463965 PI4KAP1Q8N8J0 262 aa33.46■■■□□ 2.95
SURF1-203ENST00000463965 MYD88Q99836 296 aa33.46■■■□□ 2.95
SURF1-203ENST00000463965 METTL22Q9BUU2 404 aaPredicted RBP33.46■■■□□ 2.95
SURF1-203ENST00000463965 MAP3K2Q9Y2U5 619 aa33.46■■■□□ 2.95
SURF1-203ENST00000463965 BRCA1P38398 1863 aaKnown RBP33.46■■■□□ 2.95
SURF1-203ENST00000463965 CACNA1FO60840 1977 aa33.45■■■□□ 2.94
SURF1-203ENST00000463965 NEXNQ0ZGT2 675 aa33.44■■■□□ 2.94
SURF1-203ENST00000463965 FKBP5Q13451 457 aaPredicted RBP33.44■■■□□ 2.94
SURF1-203ENST00000463965 ARHGAP27Q6ZUM4 889 aa33.44■■■□□ 2.94
SURF1-203ENST00000463965 TRMT2AQ8IZ69 625 aaKnown RBP33.44■■■□□ 2.94
SURF1-203ENST00000463965 SH3TC1Q8TE82 1336 aa33.44■■■□□ 2.94
SURF1-203ENST00000463965 ABCC12Q96J65 1359 aa33.44■■■□□ 2.94
SURF1-203ENST00000463965 YY1P25490 414 aa33.43■■■□□ 2.94
SURF1-203ENST00000463965 NLRP3Q96P20 1036 aa33.43■■■□□ 2.94
SURF1-203ENST00000463965 UTRNP46939 3433 aa33.43■■■□□ 2.94
SURF1-203ENST00000463965 ARFGEF2Q9Y6D5 1785 aa33.42■■■□□ 2.94
SURF1-203ENST00000463965 SLC10A5Q5PT55 438 aa33.42■■■□□ 2.94
SURF1-203ENST00000463965 ZNF428Q96B54 188 aa33.42■■■□□ 2.94
SURF1-203ENST00000463965 RIC1Q4ADV7 1423 aa33.42■■■□□ 2.94
SURF1-203ENST00000463965 DLEC1Q9Y238 1755 aa33.42■■■□□ 2.94
SURF1-203ENST00000463965 CCDC191Q8NCU4 936 aa33.41■■■□□ 2.94
SURF1-203ENST00000463965 RPGRQ92834 1020 aaKnown RBP33.4■■■□□ 2.94
SURF1-203ENST00000463965 ALDH1B1P30837 517 aa33.39■■■□□ 2.94
SURF1-203ENST00000463965 CWC25Q9NXE8 425 aaPredicted RBP33.39■■■□□ 2.94
SURF1-203ENST00000463965 CHD4Q14839 1912 aa33.39■■■□□ 2.94
SURF1-203ENST00000463965 ADCY9O60503 1353 aa33.38■■■□□ 2.93
SURF1-203ENST00000463965 CT47B1P0C2W7 299 aaPredicted RBP33.38■■■□□ 2.93
SURF1-203ENST00000463965 CRY2Q49AN0 593 aa33.38■■■□□ 2.93
SURF1-203ENST00000463965 ARFGEF1Q9Y6D6 1849 aa33.37■■■□□ 2.93
SURF1-203ENST00000463965 HSP90B1P14625 803 aaKnown RBP33.37■■■□□ 2.93
SURF1-203ENST00000463965 COL11A2P13942 1736 aaPredicted RBP33.36■■■□□ 2.93
SURF1-203ENST00000463965 HCLS1P14317 486 aaPredicted RBP33.36■■■□□ 2.93
SURF1-203ENST00000463965 PRPF40BQ6NWY9 871 aaKnown RBP33.36■■■□□ 2.93
SURF1-203ENST00000463965 DNAAF4Q8WXU2 420 aa33.36■■■□□ 2.93
SURF1-203ENST00000463965 FAM89AQ96GI7 184 aa33.36■■■□□ 2.93
SURF1-203ENST00000463965 ZBTB38Q8NAP3 1195 aaPredicted RBP33.35■■■□□ 2.93
SURF1-203ENST00000463965 RBM17Q96I25 401 aaKnown RBP33.35■■■□□ 2.93
SURF1-203ENST00000463965 SYNE4Q8N205 404 aa33.34■■■□□ 2.93
SURF1-203ENST00000463965 SOGA3Q5TF21 947 aa33.33■■■□□ 2.93
SURF1-203ENST00000463965 ZNF219Q9P2Y4 722 aaPredicted RBP33.33■■■□□ 2.93
SURF1-203ENST00000463965 C21orf2O43822 256 aa33.32■■■□□ 2.92
SURF1-203ENST00000463965 HOXA10P31260 410 aaPredicted RBP33.32■■■□□ 2.92
SURF1-203ENST00000463965 ALDH1L2Q3SY69 923 aa33.32■■■□□ 2.92
SURF1-203ENST00000463965 RTL5Q5HYW3 569 aaPredicted RBP33.32■■■□□ 2.92
SURF1-203ENST00000463965 IRS4O14654 1257 aaPredicted RBP33.31■■■□□ 2.92
SURF1-203ENST00000463965 PCCAP05165 728 aaPredicted RBP33.31■■■□□ 2.92
SURF1-203ENST00000463965 TNRC6CQ9HCJ0 1690 aaKnown RBP33.31■■■□□ 2.92
SURF1-203ENST00000463965 ZBED9Q6R2W3 1325 aa33.3■■■□□ 2.92
SURF1-203ENST00000463965 IGKV5-2P06315 115 aa33.3■■■□□ 2.92
SURF1-203ENST00000463965 MRPL50Q8N5N7 158 aaKnown RBP33.3■■■□□ 2.92
SURF1-203ENST00000463965 SSH1Q8WYL5 1049 aa33.3■■■□□ 2.92
SURF1-203ENST00000463965 CRAMP1Q96RY5 1269 aa33.3■■■□□ 2.92
SURF1-203ENST00000463965 NEURL1BA8MQ27 555 aa33.29■■■□□ 2.92
SURF1-203ENST00000463965 C3orf67Q6ZVT6 689 aa33.29■■■□□ 2.92
SURF1-203ENST00000463965 LINS1Q8NG48 757 aa33.28■■■□□ 2.92
SURF1-203ENST00000463965 CWF19L2Q2TBE0 894 aaKnown RBP33.27■■■□□ 2.92
SURF1-203ENST00000463965 DDX46Q7L014 1031 aaKnown RBP33.27■■■□□ 2.92
SURF1-203ENST00000463965 SMC4Q9NTJ3 1288 aa33.27■■■□□ 2.92
SURF1-203ENST00000463965 F6X3S4 739 aa33.26■■■□□ 2.91
SURF1-203ENST00000463965 BCL2L13Q9BXK5 485 aa33.25■■■□□ 2.91
SURF1-203ENST00000463965 SLX4Q8IY92 1834 aa33.25■■■□□ 2.91
SURF1-203ENST00000463965 PTPRCP08575 1304 aa33.25■■■□□ 2.91
SURF1-203ENST00000463965 CCDC93Q567U6 631 aa33.24■■■□□ 2.91
SURF1-203ENST00000463965 TMX4Q9H1E5 349 aaPredicted RBP33.24■■■□□ 2.91
SURF1-203ENST00000463965 SF3B3Q15393 1217 aaKnown RBP33.23■■■□□ 2.91
SURF1-203ENST00000463965 C7orf43Q8WVR3 580 aa33.23■■■□□ 2.91
SURF1-203ENST00000463965 PDE8AO60658 829 aa33.22■■■□□ 2.91
SURF1-203ENST00000463965 GCKRQ14397 625 aa33.22■■■□□ 2.91
SURF1-203ENST00000463965 CDHR2Q9BYE9 1310 aa33.22■■■□□ 2.91
SURF1-203ENST00000463965 CACNA1SQ13698 1873 aa33.21■■■□□ 2.91
SURF1-203ENST00000463965 CC2D2BQ6DHV5 1058 aa33.21■■■□□ 2.91
SURF1-203ENST00000463965 SLC4A10Q6U841 1118 aa33.21■■■□□ 2.91
SURF1-203ENST00000463965 JARID2Q92833 1246 aaPredicted RBP33.21■■■□□ 2.91
SURF1-203ENST00000463965 PPEF1O14829 653 aaPredicted RBP33.2■■■□□ 2.91
SURF1-203ENST00000463965 BBOX1O75936 387 aa33.2■■■□□ 2.91
SURF1-203ENST00000463965 RASSF7Q02833 373 aa33.2■■■□□ 2.91
SURF1-203ENST00000463965 BEND3Q5T5X7 828 aa33.2■■■□□ 2.91
SURF1-203ENST00000463965 C9orf131Q5VYM1 1079 aa33.2■■■□□ 2.91
SURF1-203ENST00000463965 RTKN2Q8IZC4 609 aa33.2■■■□□ 2.91
SURF1-203ENST00000463965 ABCC4O15439 1325 aa33.2■■■□□ 2.91
SURF1-203ENST00000463965 LMNB1P20700 586 aa33.19■■■□□ 2.9
SURF1-203ENST00000463965 TAOK3Q9H2K8 898 aa33.19■■■□□ 2.9
SURF1-203ENST00000463965 RNF181Q9P0P0 153 aa33.19■■■□□ 2.9
SURF1-203ENST00000463965 H7C1W4 665 aa33.18■■■□□ 2.9
SURF1-203ENST00000463965 NFKBIEO00221 500 aa33.18■■■□□ 2.9
SURF1-203ENST00000463965 GRAPQ13588 217 aa33.18■■■□□ 2.9
SURF1-203ENST00000463965 CCDC152Q4G0S7 254 aa33.18■■■□□ 2.9
SURF1-203ENST00000463965 GRIPAP1Q4V328 841 aa33.18■■■□□ 2.9
SURF1-203ENST00000463965 UBE3BQ7Z3V4 1068 aa33.18■■■□□ 2.9
SURF1-203ENST00000463965 GRAPLQ8TC17 118 aaPredicted RBP33.18■■■□□ 2.9
SURF1-203ENST00000463965 RARSP54136 660 aaKnown RBP33.17■■■□□ 2.9
SURF1-203ENST00000463965 SRCIN1Q9C0H9 1055 aa33.17■■■□□ 2.9
SURF1-203ENST00000463965 LTBP3Q9NS15 1303 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms