RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 GPC2Q8N158 579 aa14.81□□□□□ -0.04
PTPN7-204ENST00000462815 NYXQ9GZU5 481 aa14.81□□□□□ -0.04
PTPN7-204ENST00000462815 HACL1Q9UJ83 578 aa14.81□□□□□ -0.04
PTPN7-204ENST00000462815 FOXN1O15353 648 aa14.8□□□□□ -0.04
PTPN7-204ENST00000462815 NGEFQ8N5V2 710 aa14.8□□□□□ -0.04
PTPN7-204ENST00000462815 ZBTB3Q9H5J0 574 aa14.8□□□□□ -0.04
PTPN7-204ENST00000462815 RRP7AQ9Y3A4 280 aaKnown RBP14.8□□□□□ -0.04
PTPN7-204ENST00000462815 ERBB4Q15303 1308 aa14.8□□□□□ -0.04
PTPN7-204ENST00000462815 TMEM88BA6NKF7 163 aa14.79□□□□□ -0.04
PTPN7-204ENST00000462815 MYL6BP14649 208 aa14.79□□□□□ -0.04
PTPN7-204ENST00000462815 GPTP24298 496 aa14.79□□□□□ -0.04
PTPN7-204ENST00000462815 VEGFBP49765 207 aa14.79□□□□□ -0.04
PTPN7-204ENST00000462815 LAMB2P55268 1798 aa14.79□□□□□ -0.04
PTPN7-204ENST00000462815 ANKRD36CQ5JPF3 1778 aa14.79□□□□□ -0.04
PTPN7-204ENST00000462815 GIGYF2Q6Y7W6 1299 aaKnown RBP14.79□□□□□ -0.04
PTPN7-204ENST00000462815 SCNN1DP51172 638 aa14.78□□□□□ -0.04
PTPN7-204ENST00000462815 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
PTPN7-204ENST00000462815 EAPPQ56P03 285 aaPredicted RBP14.78□□□□□ -0.04
PTPN7-204ENST00000462815 MAP1SQ66K74 1059 aaPredicted RBP14.78□□□□□ -0.04
PTPN7-204ENST00000462815 CC2D2BQ6DHV5 1058 aa14.78□□□□□ -0.04
PTPN7-204ENST00000462815 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
PTPN7-204ENST00000462815 CRAMP1Q96RY5 1269 aa14.78□□□□□ -0.04
PTPN7-204ENST00000462815 RASSF10A6NK89 507 aa14.77□□□□□ -0.05
PTPN7-204ENST00000462815 GTF2E1P29083 439 aaPredicted RBP14.77□□□□□ -0.05
PTPN7-204ENST00000462815 PNMA8AQ86V59 439 aaPredicted RBP14.77□□□□□ -0.05
PTPN7-204ENST00000462815 PPEF1O14829 653 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-204ENST00000462815 SLC10A5Q5PT55 438 aa14.76□□□□□ -0.05
PTPN7-204ENST00000462815 CNTROBQ8N137 903 aa14.76□□□□□ -0.05
PTPN7-204ENST00000462815 WBP1LQ9NX94 342 aa14.76□□□□□ -0.05
PTPN7-204ENST00000462815 DUOX1Q9NRD9 1551 aa14.76□□□□□ -0.05
PTPN7-204ENST00000462815 GRIPAP1Q4V328 841 aa14.75□□□□□ -0.05
PTPN7-204ENST00000462815 RPGRQ92834 1020 aaKnown RBP14.75□□□□□ -0.05
PTPN7-204ENST00000462815 PRDM10Q9NQV6 1147 aa14.75□□□□□ -0.05
PTPN7-204ENST00000462815 LRRC37AA6NMS7 1700 aa14.75□□□□□ -0.05
PTPN7-204ENST00000462815 ABCC4O15439 1325 aa14.74□□□□□ -0.05
PTPN7-204ENST00000462815 EPS15P42566 896 aa14.74□□□□□ -0.05
PTPN7-204ENST00000462815 FMR1Q06787 632 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTPN7-204ENST00000462815 PARP10Q53GL7 1025 aa14.74□□□□□ -0.05
PTPN7-204ENST00000462815 JDP2Q8WYK2 163 aa14.74□□□□□ -0.05
PTPN7-204ENST00000462815 RBM17Q96I25 401 aaKnown RBP14.74□□□□□ -0.05
PTPN7-204ENST00000462815 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
PTPN7-204ENST00000462815 TSPYL4Q9UJ04 414 aa14.74□□□□□ -0.05
PTPN7-204ENST00000462815 COL4A1P02462 1669 aa14.74□□□□□ -0.05
PTPN7-204ENST00000462815 ANXA1P04083 346 aa14.73□□□□□ -0.05
PTPN7-204ENST00000462815 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTPN7-204ENST00000462815 BABAM1Q9NWV8 329 aa14.73□□□□□ -0.05
PTPN7-204ENST00000462815 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
PTPN7-204ENST00000462815 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
PTPN7-204ENST00000462815 DDX60Q8IY21 1712 aaKnown RBP14.72□□□□□ -0.05
PTPN7-204ENST00000462815 MAPK8IP3Q9UPT6 1336 aa14.72□□□□□ -0.05
PTPN7-204ENST00000462815 NEFMP07197 916 aa14.72□□□□□ -0.05
PTPN7-204ENST00000462815 EIF6P56537 245 aaKnown RBP14.72□□□□□ -0.05
PTPN7-204ENST00000462815 PPP1R42Q7Z4L9 355 aa14.72□□□□□ -0.05
PTPN7-204ENST00000462815 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
PTPN7-204ENST00000462815 GJA3Q9Y6H8 435 aa14.72□□□□□ -0.05
PTPN7-204ENST00000462815 TMPOP42166 694 aaKnown RBP14.71□□□□□ -0.05
PTPN7-204ENST00000462815 RIPK4P57078 832 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 AOC3Q16853 763 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 DEFB115Q30KQ5 88 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 CST9Q5W186 159 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 NLRP10Q86W26 655 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 UTP14AQ9BVJ6 771 aaKnown RBP14.71□□□□□ -0.05
PTPN7-204ENST00000462815 VPS33BQ9H267 617 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 TRPM7Q96QT4 1865 aa14.71□□□□□ -0.05
PTPN7-204ENST00000462815 WDR33Q9C0J8 1336 aaKnown RBP14.7□□□□□ -0.06
PTPN7-204ENST00000462815 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
PTPN7-204ENST00000462815 HSPA8P11142 646 aaKnown RBP14.7□□□□□ -0.06
PTPN7-204ENST00000462815 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
PTPN7-204ENST00000462815 KRT24Q2M2I5 525 aa14.7□□□□□ -0.06
PTPN7-204ENST00000462815 USP50Q70EL3 339 aaPredicted RBP14.7□□□□□ -0.06
PTPN7-204ENST00000462815 NLRP3Q96P20 1036 aa14.7□□□□□ -0.06
PTPN7-204ENST00000462815 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
PTPN7-204ENST00000462815 TAF1P21675 1872 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 TRAF5O00463 557 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 EIF2S2P20042 333 aaKnown RBP14.69□□□□□ -0.06
PTPN7-204ENST00000462815 CXCL9Q07325 125 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 COPS6Q7L5N1 327 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 NIM1KQ8IY84 436 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 XAGE3Q8WTP9 111 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 GPRC5DQ9NZD1 345 aa14.69□□□□□ -0.06
PTPN7-204ENST00000462815 CHL1O00533 1208 aa14.68□□□□□ -0.06
PTPN7-204ENST00000462815 HCLS1P14317 486 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-204ENST00000462815 LMOD1P29536 600 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-204ENST00000462815 LBX1P52954 281 aa14.68□□□□□ -0.06
PTPN7-204ENST00000462815 PGAP2Q9UHJ9 254 aa14.68□□□□□ -0.06
PTPN7-204ENST00000462815 TRIM35Q9UPQ4 493 aa14.68□□□□□ -0.06
PTPN7-204ENST00000462815 KIAA2012Q0VF49 1180 aa14.67□□□□□ -0.06
PTPN7-204ENST00000462815 TCIRG1Q13488 830 aa14.67□□□□□ -0.06
PTPN7-204ENST00000462815 SP8Q8IXZ3 490 aa14.67□□□□□ -0.06
PTPN7-204ENST00000462815 ADARB2Q9NS39 739 aaKnown RBP14.67□□□□□ -0.06
PTPN7-204ENST00000462815 ZNRF3Q9ULT6 936 aa14.67□□□□□ -0.06
PTPN7-204ENST00000462815 YDJCA8MPS7 323 aa14.66□□□□□ -0.06
PTPN7-204ENST00000462815 BBOX1O75936 387 aa14.66□□□□□ -0.06
PTPN7-204ENST00000462815 GMPSP49915 693 aaPredicted RBP14.66□□□□□ -0.06
PTPN7-204ENST00000462815 HIRAP54198 1017 aaPredicted RBP14.66□□□□□ -0.06
PTPN7-204ENST00000462815 GRAPQ13588 217 aa14.66□□□□□ -0.06
PTPN7-204ENST00000462815 RALBP1Q15311 655 aa14.66□□□□□ -0.06
PTPN7-204ENST00000462815 GRAPLQ8TC17 118 aaPredicted RBP14.66□□□□□ -0.06
PTPN7-204ENST00000462815 NECTIN2Q92692 538 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms