RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 SGSM2O43147 1006 aa18.39■□□□□ 0.53
SSR4-206ENST00000460616 AOX1Q06278 1338 aa18.39■□□□□ 0.53
SSR4-206ENST00000460616 TRIM5Q9C035 493 aa18.39■□□□□ 0.53
SSR4-206ENST00000460616 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
SSR4-206ENST00000460616 MAP4K4O95819 1239 aaPredicted RBP18.39■□□□□ 0.53
SSR4-206ENST00000460616 TERF2Q15554 542 aa18.39■□□□□ 0.53
SSR4-206ENST00000460616 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
SSR4-206ENST00000460616 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
SSR4-206ENST00000460616 VPS37CA5D8V6 355 aaPredicted RBP18.38■□□□□ 0.53
SSR4-206ENST00000460616 DTNBO60941 627 aa18.38■□□□□ 0.53
SSR4-206ENST00000460616 LARGE1O95461 756 aa18.38■□□□□ 0.53
SSR4-206ENST00000460616 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
SSR4-206ENST00000460616 LSG1Q9H089 658 aaKnown RBP18.38■□□□□ 0.53
SSR4-206ENST00000460616 CBX8Q9HC52 389 aa18.38■□□□□ 0.53
SSR4-206ENST00000460616 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
SSR4-206ENST00000460616 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
SSR4-206ENST00000460616 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
SSR4-206ENST00000460616 CPA1P15085 419 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
SSR4-206ENST00000460616 ZNF75DP51815 510 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 AMPHP49418 695 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.37■□□□□ 0.53
SSR4-206ENST00000460616 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 KRT222Q8N1A0 295 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 ZNF592Q92610 1267 aa18.37■□□□□ 0.53
SSR4-206ENST00000460616 RGPD2P0DJD1 1756 aa18.36■□□□□ 0.53
SSR4-206ENST00000460616 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
SSR4-206ENST00000460616 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
SSR4-206ENST00000460616 TNMDQ9H2S6 317 aa18.36■□□□□ 0.53
SSR4-206ENST00000460616 FLT4P35916 1363 aa18.36■□□□□ 0.53
SSR4-206ENST00000460616 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 LIG1P18858 919 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 HOXC9P31274 260 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 KRT85P78386 507 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 TTC6Q86TZ1 520 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 COL18A1P39060 1754 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 ZSCAN31Q96LW9 406 aaPredicted RBP18.35■□□□□ 0.53
SSR4-206ENST00000460616 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
SSR4-206ENST00000460616 ZBTB22O15209 634 aa18.34■□□□□ 0.53
SSR4-206ENST00000460616 CHRNA2Q15822 529 aa18.34■□□□□ 0.53
SSR4-206ENST00000460616 CACTINQ8WUQ7 758 aaKnown RBP18.34■□□□□ 0.53
SSR4-206ENST00000460616 BCL11BQ9C0K0 894 aaPredicted RBP18.34■□□□□ 0.53
SSR4-206ENST00000460616 ZNF397Q8NF99 534 aaPredicted RBP18.34■□□□□ 0.53
SSR4-206ENST00000460616 PDRG1Q9NUG6 133 aa18.34■□□□□ 0.53
SSR4-206ENST00000460616 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
SSR4-206ENST00000460616 LRRFIP2Q9Y608 721 aaKnown RBP18.34■□□□□ 0.53
SSR4-206ENST00000460616 KCNJ4P48050 445 aa18.33■□□□□ 0.53
SSR4-206ENST00000460616 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.53
SSR4-206ENST00000460616 STK31Q9BXU1 1019 aa18.33■□□□□ 0.53
SSR4-206ENST00000460616 SH2B1Q9NRF2 756 aaPredicted RBP18.33■□□□□ 0.53
SSR4-206ENST00000460616 DACT1Q9NYF0 836 aa18.33■□□□□ 0.53
SSR4-206ENST00000460616 SPG7Q9UQ90 795 aa18.33■□□□□ 0.53
SSR4-206ENST00000460616 AXIN2Q9Y2T1 843 aa18.33■□□□□ 0.53
SSR4-206ENST00000460616 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.52
SSR4-206ENST00000460616 VPS53Q5VIR6 699 aa18.33■□□□□ 0.52
SSR4-206ENST00000460616 CWC27Q6UX04 472 aaKnown RBP18.33■□□□□ 0.52
SSR4-206ENST00000460616 LTV1Q96GA3 475 aaPredicted RBP18.33■□□□□ 0.52
SSR4-206ENST00000460616 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
SSR4-206ENST00000460616 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
SSR4-206ENST00000460616 LARP1BQ659C4 914 aaKnown RBP18.32■□□□□ 0.52
SSR4-206ENST00000460616 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
SSR4-206ENST00000460616 ELP1O95163 1332 aa18.32■□□□□ 0.52
SSR4-206ENST00000460616 HSPA1LP34931 641 aa18.32■□□□□ 0.52
SSR4-206ENST00000460616 CNTROBQ8N137 903 aa18.32■□□□□ 0.52
SSR4-206ENST00000460616 TDRD7Q8NHU6 1098 aaKnown RBP18.32■□□□□ 0.52
SSR4-206ENST00000460616 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
SSR4-206ENST00000460616 CRB1P82279 1406 aa18.31■□□□□ 0.52
SSR4-206ENST00000460616 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
SSR4-206ENST00000460616 ZNF165P49910 485 aa18.31■□□□□ 0.52
SSR4-206ENST00000460616 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
SSR4-206ENST00000460616 ZNF215Q9UL58 517 aaPredicted RBP18.31■□□□□ 0.52
SSR4-206ENST00000460616 PDE4CQ08493 712 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 FLIIQ13045 1269 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 FERMT3Q86UX7 667 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 IP6K1Q92551 441 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 TIGD1Q96MW7 591 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
SSR4-206ENST00000460616 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 IRX5P78411 483 aaPredicted RBP18.3■□□□□ 0.52
SSR4-206ENST00000460616 FAM173BQ6P4H8 233 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
SSR4-206ENST00000460616 FAM53CQ9NYF3 392 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
SSR4-206ENST00000460616 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
SSR4-206ENST00000460616 PDIA4P13667 645 aaKnown RBP18.29■□□□□ 0.52
SSR4-206ENST00000460616 PTPN14Q15678 1187 aa18.29■□□□□ 0.52
SSR4-206ENST00000460616 ME3Q16798 604 aa18.29■□□□□ 0.52
SSR4-206ENST00000460616 ADCK5Q3MIX3 580 aa18.29■□□□□ 0.52
SSR4-206ENST00000460616 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
SSR4-206ENST00000460616 LMO7Q8WWI1 1683 aa18.29■□□□□ 0.52
SSR4-206ENST00000460616 LRRC8AQ8IWT6 810 aa18.29■□□□□ 0.52
SSR4-206ENST00000460616 SCAND2PQ9GZW5 306 aaPredicted RBP18.29■□□□□ 0.52
SSR4-206ENST00000460616 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms