RNA–Protein interactions for RNA: ENST00000455611.6

OTUD4-203, Transcript of OTU deubiquitinase 4, humanhuman

TSL 5

Gene OTUD4, Length 2,498 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-203ENST00000455611 ADH7P40394 386 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 HIRAP54198 1017 aaPredicted RBP3.07□□□□□ -1.92
OTUD4-203ENST00000455611 GTF2IP78347 998 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 VAC14Q08AM6 782 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 LRP8Q14114 963 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 ADGRE1Q14246 886 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 LRRC69Q6ZNQ3 347 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 L3MBTL2Q969R5 705 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 ZNF358Q9NW07 568 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 ZNF232Q9UNY5 417 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 RBM19Q9Y4C8 960 aaKnown RBP3.07□□□□□ -1.92
OTUD4-203ENST00000455611 SKIP12755 728 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 ABL2P42684 1182 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 BRPF1P55201 1214 aaPredicted RBP3.07□□□□□ -1.92
OTUD4-203ENST00000455611 PSMA6P60900 246 aaKnown RBP3.07□□□□□ -1.92
OTUD4-203ENST00000455611 PSME1Q06323 249 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 SPEM2Q0P670 501 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 TXNRD3Q86VQ6 643 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 DTWD1Q8N5C7 304 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 LENG1Q96BZ8 264 aaPredicted RBP3.07□□□□□ -1.92
OTUD4-203ENST00000455611 STRN4Q9NRL3 753 aa3.07□□□□□ -1.92
OTUD4-203ENST00000455611 COL17A1Q9UMD9 1497 aaPredicted RBP3.06□□□□□ -1.92
OTUD4-203ENST00000455611 URB2Q14146 1524 aaKnown RBP3.06□□□□□ -1.92
OTUD4-203ENST00000455611 ITGB7P26010 798 aa3.06□□□□□ -1.92
OTUD4-203ENST00000455611 CEP63Q96MT8 703 aa3.06□□□□□ -1.92
OTUD4-203ENST00000455611 KRTAP17-1Q9BYP8 105 aa3.06□□□□□ -1.92
OTUD4-203ENST00000455611 C11orf16Q9NQ32 467 aa3.06□□□□□ -1.92
OTUD4-203ENST00000455611 STARD13Q9Y3M8 1113 aa3.06□□□□□ -1.92
OTUD4-203ENST00000455611 MAPKBP1O60336 1514 aa3.06□□□□□ -1.92
OTUD4-203ENST00000455611 NID1P14543 1247 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 ARID4AP29374 1257 aaPredicted RBP3.05□□□□□ -1.92
OTUD4-203ENST00000455611 TXLNAP40222 546 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 C20orf204Q6ZNR8 217 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 SLC9A9Q8IVB4 645 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 STAG2Q8N3U4 1231 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 FANCD2Q9BXW9 1451 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 STAU1O95793 577 aaKnown RBP3.05□□□□□ -1.92
OTUD4-203ENST00000455611 SFSWAPQ12872 951 aaKnown RBP3.05□□□□□ -1.92
OTUD4-203ENST00000455611 PRSS36Q5K4E3 855 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 PLEKHM2Q8IWE5 1019 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 ZDHHC1Q8WTX9 485 aa3.05□□□□□ -1.92
OTUD4-203ENST00000455611 CHMP7Q8WUX9 453 aaPredicted RBP3.05□□□□□ -1.92
OTUD4-203ENST00000455611 EPB42P16452 691 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 PIP4K2BP78356 416 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 COL9A3Q14050 684 aaPredicted RBP3.04□□□□□ -1.92
OTUD4-203ENST00000455611 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.04□□□□□ -1.92
OTUD4-203ENST00000455611 TTC9Q92623 222 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 UBE2OQ9C0C9 1292 aaKnown RBP3.04□□□□□ -1.92
OTUD4-203ENST00000455611 BRD7Q9NPI1 651 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 YEATS2Q9ULM3 1422 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 SETBP1Q9Y6X0 1596 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 A0A0A0MRY4 1105 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 SFI1A8K8P3 1242 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 ALBP02768 609 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 TXKP42681 527 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 LARGE2Q8N3Y3 721 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 C7orf43Q8WVR3 580 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 SLC30A3Q99726 388 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 ALG2Q9H553 416 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 GDPD2Q9HCC8 539 aa3.04□□□□□ -1.92
OTUD4-203ENST00000455611 BAZ1BQ9UIG0 1483 aaKnown RBP3.04□□□□□ -1.92
OTUD4-203ENST00000455611 PALM3A6NDB9 673 aaPredicted RBP3.03□□□□□ -1.92
OTUD4-203ENST00000455611 EPHA4P54764 986 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 MBTPS1Q14703 1052 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 IER5Q5VY09 327 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 CACTIN-AS1Q8N1I8 211 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 SUSD3Q96L08 255 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 PNMA5Q96PV4 448 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 FRRS1LQ9P0K9 344 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 RNF112Q9ULX5 631 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 SLC6A14Q9UN76 642 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 PARP3Q9Y6F1 533 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 AQRO60306 1485 aaKnown RBP eCLIP3.03□□□□□ -1.921e-6■■□□□ 14.5
OTUD4-203ENST00000455611 HYAL3O43820 417 aaPredicted RBP3.03□□□□□ -1.92
OTUD4-203ENST00000455611 RAD21O60216 631 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 RGS9O75916 674 aaPredicted RBP3.03□□□□□ -1.92
OTUD4-203ENST00000455611 C1QTNF8P60827 252 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 FBXO11Q86XK2 927 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 TP53INP1Q96A56 240 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 PHACTR1Q9C0D0 580 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 SRA1Q9HD15 236 aaKnown RBP3.03□□□□□ -1.92
OTUD4-203ENST00000455611 USP3Q9Y6I4 520 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 ADAMTSL3P82987 1691 aa3.03□□□□□ -1.92
OTUD4-203ENST00000455611 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
OTUD4-203ENST00000455611 PAX4O43316 350 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 MAP3K6O95382 1288 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 CCINQ13939 588 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 TNS4Q8IZW8 715 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.02□□□□□ -1.937e-10■■■■■ 634.7
OTUD4-203ENST00000455611 USP21Q9UK80 565 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 HCN2Q9UL51 889 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.02□□□□□ -1.93
OTUD4-203ENST00000455611 KIF21BO75037 1637 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 USP17L5A8MUK1 530 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 FAM229AH3BQW9 127 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 PRELPP51888 382 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 GRIK4Q16099 956 aa3.02□□□□□ -1.93
OTUD4-203ENST00000455611 CCDC102BQ68D86 513 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms