RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 IFIT5Q13325 482 aaKnown RBP13.89□□□□□ -0.19
SEC16A-207ENST00000453963 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
SEC16A-207ENST00000453963 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
SEC16A-207ENST00000453963 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
SEC16A-207ENST00000453963 ARFGAP3Q9NP61 516 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
SEC16A-207ENST00000453963 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 LUZP1Q86V48 1076 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 MEIS3Q99687 375 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
SEC16A-207ENST00000453963 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 RNF123Q5XPI4 1314 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 PIK3C2GO75747 1445 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 RLBP1P12271 317 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
SEC16A-207ENST00000453963 CCDC12Q8WUD4 166 aaPredicted RBP13.88□□□□□ -0.19
SEC16A-207ENST00000453963 RRAGDQ9NQL2 400 aaPredicted RBP13.88□□□□□ -0.19
SEC16A-207ENST00000453963 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 A0A087WZG4 1122 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 CACNA2D4Q7Z3S7 1137 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
SEC16A-207ENST00000453963 GOLGA8AA7E2F4 631 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 ZNF76P36508 570 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 FEZ1Q99689 392 aa13.88□□□□□ -0.19
SEC16A-207ENST00000453963 PYM1Q9BRP8 204 aaKnown RBP13.87□□□□□ -0.19
SEC16A-207ENST00000453963 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
SEC16A-207ENST00000453963 CAVIN4Q5BKX8 364 aa13.87□□□□□ -0.19
SEC16A-207ENST00000453963 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
SEC16A-207ENST00000453963 RNF41Q9H4P4 317 aaPredicted RBP13.87□□□□□ -0.19
SEC16A-207ENST00000453963 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
SEC16A-207ENST00000453963 UBASH3AP57075 661 aa13.87□□□□□ -0.19
SEC16A-207ENST00000453963 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
SEC16A-207ENST00000453963 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
SEC16A-207ENST00000453963 UHRF1BP1LA0JNW5 1464 aa13.87□□□□□ -0.19
SEC16A-207ENST00000453963 A2MP01023 1474 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 TERF1P54274 439 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 EHBP1Q8NDI1 1231 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
SEC16A-207ENST00000453963 TSG101Q99816 390 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 PRAG1Q86YV5 1406 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 NPHP3Q7Z494 1330 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 IVLP07476 585 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 TYRO3Q06418 890 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 NECAB1Q8N987 351 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 SEPT11Q9NVA2 429 aaKnown RBP13.86□□□□□ -0.19
SEC16A-207ENST00000453963 TMOD2Q9NZR1 351 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
SEC16A-207ENST00000453963 ANKRD24Q8TF21 1146 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 TEX13AQ9BXU3 409 aaPredicted RBP13.86□□□□□ -0.19
SEC16A-207ENST00000453963 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
SEC16A-207ENST00000453963 PPP1R12BO60237 982 aaPredicted RBP13.85□□□□□ -0.19
SEC16A-207ENST00000453963 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
SEC16A-207ENST00000453963 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.85□□□□□ -0.194e-8■■□□□ 11.8
SEC16A-207ENST00000453963 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
SEC16A-207ENST00000453963 ATP8B2P98198 1209 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 CHRNA2Q15822 529 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 ZBTB3Q9H5J0 574 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 POLR3DP05423 398 aaPredicted RBP13.85□□□□□ -0.19
SEC16A-207ENST00000453963 DESP17661 470 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 SYKP43405 635 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 SMAP1Q8IYB5 467 aaPredicted RBP13.85□□□□□ -0.19
SEC16A-207ENST00000453963 DNAJC25Q9H1X3 360 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 ANKRD62A6NC57 917 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 MAP2K1Q02750 393 aaPredicted RBP13.85□□□□□ -0.19
SEC16A-207ENST00000453963 DYDC1Q8WWB3 177 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 BRF1Q92994 677 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
SEC16A-207ENST00000453963 USP5P45974 858 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 TTC21AQ8NDW8 1320 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 NUP153P49790 1475 aaKnown RBP13.84□□□□□ -0.19
SEC16A-207ENST00000453963 EZRP15311 586 aaKnown RBP13.84□□□□□ -0.19
SEC16A-207ENST00000453963 TNNQ9UQP3 1299 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
SEC16A-207ENST00000453963 TUBB4BP68371 445 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 IFFO1Q0D2I5 559 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 ZGPATQ8N5A5 531 aaKnown RBP13.84□□□□□ -0.19
SEC16A-207ENST00000453963 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
SEC16A-207ENST00000453963 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 PIBF1Q8WXW3 757 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 TESK2Q96S53 571 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 USP26Q9BXU7 913 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 OGFRQ9NZT2 677 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 TEX14Q8IWB6 1497 aa13.84□□□□□ -0.19
SEC16A-207ENST00000453963 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.19
SEC16A-207ENST00000453963 KIF20AO95235 890 aa13.83□□□□□ -0.19
SEC16A-207ENST00000453963 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.19
SEC16A-207ENST00000453963 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.19
SEC16A-207ENST00000453963 NCOA7Q8NI08 942 aa13.83□□□□□ -0.19
SEC16A-207ENST00000453963 FBLN1P23142 703 aa13.83□□□□□ -0.2
SEC16A-207ENST00000453963 GPTP24298 496 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms