RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 F6X3S4 739 aa17.09■□□□□ 0.33
SNHG4-201ENST00000448190 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
SNHG4-201ENST00000448190 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
SNHG4-201ENST00000448190 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
SNHG4-201ENST00000448190 ADCY9O60503 1353 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 ABCC12Q96J65 1359 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 GRIN3BO60391 1043 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 SRGNP10124 158 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
SNHG4-201ENST00000448190 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 TTLL6Q8N841 843 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 SCN7AQ01118 1682 aa17.07■□□□□ 0.32
SNHG4-201ENST00000448190 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
SNHG4-201ENST00000448190 KLRG2A4D1S0 409 aaPredicted RBP17.05■□□□□ 0.32
SNHG4-201ENST00000448190 SLC10A5Q5PT55 438 aa17.05■□□□□ 0.32
SNHG4-201ENST00000448190 SLC4A10Q6U841 1118 aa17.05■□□□□ 0.32
SNHG4-201ENST00000448190 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
SNHG4-201ENST00000448190 MASTLQ96GX5 879 aa17.05■□□□□ 0.32
SNHG4-201ENST00000448190 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
SNHG4-201ENST00000448190 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
SNHG4-201ENST00000448190 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
SNHG4-201ENST00000448190 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
SNHG4-201ENST00000448190 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
SNHG4-201ENST00000448190 NEXNQ0ZGT2 675 aa17.04■□□□□ 0.32
SNHG4-201ENST00000448190 CCDC191Q8NCU4 936 aa17.04■□□□□ 0.32
SNHG4-201ENST00000448190 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
SNHG4-201ENST00000448190 PDZRN3Q9UPQ7 1066 aa17.04■□□□□ 0.32
SNHG4-201ENST00000448190 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
SNHG4-201ENST00000448190 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
SNHG4-201ENST00000448190 C21orf2O43822 256 aa17.03■□□□□ 0.32
SNHG4-201ENST00000448190 NPR1P16066 1061 aa17.03■□□□□ 0.32
SNHG4-201ENST00000448190 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
SNHG4-201ENST00000448190 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
SNHG4-201ENST00000448190 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
SNHG4-201ENST00000448190 ALDH1L2Q3SY69 923 aa17.02■□□□□ 0.32
SNHG4-201ENST00000448190 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
SNHG4-201ENST00000448190 ZBTB38Q8NAP3 1195 aaPredicted RBP17.02■□□□□ 0.32
SNHG4-201ENST00000448190 CNKSR1Q969H4 720 aa17.02■□□□□ 0.32
SNHG4-201ENST00000448190 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
SNHG4-201ENST00000448190 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
SNHG4-201ENST00000448190 NOB1Q9ULX3 412 aaKnown RBP17.01■□□□□ 0.31
SNHG4-201ENST00000448190 IBTKQ9P2D0 1353 aaPredicted RBP17.01■□□□□ 0.31
SNHG4-201ENST00000448190 BCAR3O75815 825 aa17■□□□□ 0.31
SNHG4-201ENST00000448190 PCCAP05165 728 aaPredicted RBP17■□□□□ 0.31
SNHG4-201ENST00000448190 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
SNHG4-201ENST00000448190 GCKRQ14397 625 aa17■□□□□ 0.31
SNHG4-201ENST00000448190 CRY2Q49AN0 593 aa17■□□□□ 0.31
SNHG4-201ENST00000448190 BEND3Q5T5X7 828 aa17■□□□□ 0.31
SNHG4-201ENST00000448190 SLC51AQ86UW1 340 aa17■□□□□ 0.31
SNHG4-201ENST00000448190 LINS1Q8NG48 757 aa17■□□□□ 0.31
SNHG4-201ENST00000448190 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
SNHG4-201ENST00000448190 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
SNHG4-201ENST00000448190 AFDNP55196 1824 aaKnown RBP16.99■□□□□ 0.31
SNHG4-201ENST00000448190 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
SNHG4-201ENST00000448190 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
SNHG4-201ENST00000448190 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
SNHG4-201ENST00000448190 H7C1W4 665 aa16.98■□□□□ 0.31
SNHG4-201ENST00000448190 YY1P25490 414 aa16.98■□□□□ 0.31
SNHG4-201ENST00000448190 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
SNHG4-201ENST00000448190 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
SNHG4-201ENST00000448190 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
SNHG4-201ENST00000448190 RASSF7Q02833 373 aa16.97■□□□□ 0.31
SNHG4-201ENST00000448190 NUP98P52948 1817 aa16.97■□□□□ 0.31
SNHG4-201ENST00000448190 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
SNHG4-201ENST00000448190 C7orf43Q8WVR3 580 aa16.96■□□□□ 0.31
SNHG4-201ENST00000448190 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
SNHG4-201ENST00000448190 CRAMP1Q96RY5 1269 aa16.96■□□□□ 0.31
SNHG4-201ENST00000448190 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
SNHG4-201ENST00000448190 PTPRCP08575 1304 aa16.96■□□□□ 0.3
SNHG4-201ENST00000448190 PDE8AO60658 829 aa16.95■□□□□ 0.3
SNHG4-201ENST00000448190 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
SNHG4-201ENST00000448190 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
SNHG4-201ENST00000448190 TNNQ9UQP3 1299 aa16.95■□□□□ 0.3
SNHG4-201ENST00000448190 ABCC4O15439 1325 aa16.95■□□□□ 0.3
SNHG4-201ENST00000448190 KIAA1551Q9HCM1 1747 aa16.94■□□□□ 0.3
SNHG4-201ENST00000448190 PRELPP51888 382 aa16.94■□□□□ 0.3
SNHG4-201ENST00000448190 CASP7P55210 303 aa16.94■□□□□ 0.3
SNHG4-201ENST00000448190 C9orf78Q9NZ63 289 aaPredicted RBP16.94■□□□□ 0.3
SNHG4-201ENST00000448190 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
SNHG4-201ENST00000448190 NFKBIEO00221 500 aa16.93■□□□□ 0.3
SNHG4-201ENST00000448190 PPEF1O14829 653 aaPredicted RBP16.93■□□□□ 0.3
SNHG4-201ENST00000448190 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
SNHG4-201ENST00000448190 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
SNHG4-201ENST00000448190 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
SNHG4-201ENST00000448190 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
SNHG4-201ENST00000448190 TTLL11Q8NHH1 800 aa16.92■□□□□ 0.3
SNHG4-201ENST00000448190 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
SNHG4-201ENST00000448190 ANKRD31Q8N7Z5 1873 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 RIC1Q4ADV7 1423 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 GRM8O00222 908 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 BBOX1O75936 387 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 BRPF1P55201 1214 aaPredicted RBP16.91■□□□□ 0.3
SNHG4-201ENST00000448190 CTSWP56202 376 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 GRAPQ13588 217 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
SNHG4-201ENST00000448190 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms