RNA–Protein interactions for RNA: ENST00000445241.5

PTPA-222, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-222	ENST00000445241	ADCY9	O60503	1353 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	LAMB2	P55268	1798 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	PI4KAP2	A4QPH2	592 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	SRGN	P10124	158 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	HSP90B1	P14625	803 aa	Known RBP	18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	NEXN	Q0ZGT2	675 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	DALRD3	Q5D0E6	543 aa	Known RBP	18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	STYK1	Q6J9G0	422 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	PI4KAP1	Q8N8J0	262 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	MASTL	Q96GX5	879 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	SH3TC1	Q8TE82	1336 aa		18.69	■□□□□ 0.58
PTPA-222	ENST00000445241	YBX3	P16989	372 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	CHRNA5	P30532	468 aa		18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	FKBP5	Q13451	457 aa	Predicted RBP	18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	CRY2	Q49AN0	593 aa		18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	G2E3	Q7L622	706 aa		18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	TTLL6	Q8N841	843 aa		18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	MAP3K2	Q9Y2U5	619 aa		18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	ABCC12	Q96J65	1359 aa		18.68	■□□□□ 0.58
PTPA-222	ENST00000445241	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	FAM177B	A6PVY3	158 aa		18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	TCERG1	O14776	1098 aa	Known RBP	18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	NPR1	P16066	1061 aa		18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	BRPF1	P55201	1214 aa	Predicted RBP	18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	ERFE	Q4G0M1	354 aa		18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	NUTM1	Q86Y26	1132 aa		18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	CNKSR1	Q969H4	720 aa		18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	TRMT112	Q9UI30	125 aa	Known RBP	18.67	■□□□□ 0.58
PTPA-222	ENST00000445241	PELP1	Q8IZL8	1130 aa	Known RBP	18.66	■□□□□ 0.58
PTPA-222	ENST00000445241	DNAAF4	Q8WXU2	420 aa		18.66	■□□□□ 0.58
PTPA-222	ENST00000445241	MYD88	Q99836	296 aa		18.66	■□□□□ 0.58
PTPA-222	ENST00000445241	PTPRC	P08575	1304 aa		18.66	■□□□□ 0.58
PTPA-222	ENST00000445241	DDX60	Q8IY21	1712 aa	Known RBP	18.66	■□□□□ 0.58
PTPA-222	ENST00000445241	ATP5J2-PTCD1	G3V325	749 aa		18.65	■□□□□ 0.58
PTPA-222	ENST00000445241	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.65	■□□□□ 0.58
PTPA-222	ENST00000445241	NLRP3	Q96P20	1036 aa		18.65	■□□□□ 0.58
PTPA-222	ENST00000445241	CWC25	Q9NXE8	425 aa	Predicted RBP	18.65	■□□□□ 0.58
PTPA-222	ENST00000445241	BCS1L	Q9Y276	419 aa		18.65	■□□□□ 0.58
PTPA-222	ENST00000445241	PCCA	P05165	728 aa	Predicted RBP	18.64	■□□□□ 0.57
PTPA-222	ENST00000445241	CCDC24	Q8N4L8	307 aa		18.64	■□□□□ 0.57
PTPA-222	ENST00000445241	MRPL50	Q8N5N7	158 aa	Known RBP	18.64	■□□□□ 0.57
PTPA-222	ENST00000445241	CACNA1S	Q13698	1873 aa		18.64	■□□□□ 0.57
PTPA-222	ENST00000445241	GOLGB1	Q14789	3259 aa	Known RBP	18.64	■□□□□ 0.57
PTPA-222	ENST00000445241	ALDH1B1	P30837	517 aa		18.63	■□□□□ 0.57
PTPA-222	ENST00000445241	HOXA10	P31260	410 aa	Predicted RBP	18.63	■□□□□ 0.57
PTPA-222	ENST00000445241	SOGA3	Q5TF21	947 aa		18.63	■□□□□ 0.57
PTPA-222	ENST00000445241	LINS1	Q8NG48	757 aa		18.63	■□□□□ 0.57
PTPA-222	ENST00000445241	SSH1	Q8WYL5	1049 aa		18.63	■□□□□ 0.57
PTPA-222	ENST00000445241	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.63	■□□□□ 0.57
PTPA-222	ENST00000445241	MYH3	P11055	1940 aa		18.62	■□□□□ 0.57
PTPA-222	ENST00000445241	IGKV5-2	P06315	115 aa		18.62	■□□□□ 0.57
PTPA-222	ENST00000445241	CDHR2	Q9BYE9	1310 aa		18.62	■□□□□ 0.57
PTPA-222	ENST00000445241	SLX4	Q8IY92	1834 aa		18.62	■□□□□ 0.57
PTPA-222	ENST00000445241	NEURL1B	A8MQ27	555 aa		18.61	■□□□□ 0.57
PTPA-222	ENST00000445241	RPGR	Q92834	1020 aa	Known RBP	18.61	■□□□□ 0.57
PTPA-222	ENST00000445241	RBM17	Q96I25	401 aa	Known RBP	18.61	■□□□□ 0.57
PTPA-222	ENST00000445241	CRAMP1	Q96RY5	1269 aa		18.61	■□□□□ 0.57
PTPA-222	ENST00000445241	SMC4	Q9NTJ3	1288 aa		18.61	■□□□□ 0.57
PTPA-222	ENST00000445241	RARS	P54136	660 aa	Known RBP	18.6	■□□□□ 0.57
PTPA-222	ENST00000445241	FAM89A	Q96GI7	184 aa		18.6	■□□□□ 0.57
PTPA-222	ENST00000445241	FER1L6	Q2WGJ9	1857 aa		18.6	■□□□□ 0.57
PTPA-222	ENST00000445241	UTRN	P46939	3433 aa		18.59	■□□□□ 0.57
PTPA-222	ENST00000445241	KIF16B	Q96L93	1317 aa		18.59	■□□□□ 0.57
PTPA-222	ENST00000445241	IRS4	O14654	1257 aa	Predicted RBP	18.59	■□□□□ 0.57
PTPA-222	ENST00000445241	SF3B3	Q15393	1217 aa	Known RBP	18.59	■□□□□ 0.57
PTPA-222	ENST00000445241	PRPF40B	Q6NWY9	871 aa	Known RBP	18.59	■□□□□ 0.57
PTPA-222	ENST00000445241	ALDH1L1	O75891	902 aa		18.58	■□□□□ 0.56
PTPA-222	ENST00000445241	HCLS1	P14317	486 aa	Predicted RBP	18.58	■□□□□ 0.56
PTPA-222	ENST00000445241	GCKR	Q14397	625 aa		18.58	■□□□□ 0.56
PTPA-222	ENST00000445241	GRIPAP1	Q4V328	841 aa		18.58	■□□□□ 0.56
PTPA-222	ENST00000445241	BEND3	Q5T5X7	828 aa		18.58	■□□□□ 0.56
PTPA-222	ENST00000445241	ARHGAP45	Q92619	1136 aa		18.58	■□□□□ 0.56
PTPA-222	ENST00000445241	SBF1	O95248	1867 aa		18.58	■□□□□ 0.56
PTPA-222	ENST00000445241		H7C1W4	665 aa		18.57	■□□□□ 0.56
PTPA-222	ENST00000445241	CWF19L2	Q2TBE0	894 aa	Known RBP	18.57	■□□□□ 0.56
PTPA-222	ENST00000445241	CC2D2B	Q6DHV5	1058 aa		18.57	■□□□□ 0.56
PTPA-222	ENST00000445241	WWC3	Q9ULE0	1092 aa		18.57	■□□□□ 0.56
PTPA-222	ENST00000445241		F6X3S4	739 aa		18.56	■□□□□ 0.56
PTPA-222	ENST00000445241	PDE8A	O60658	829 aa		18.56	■□□□□ 0.56
PTPA-222	ENST00000445241	TMC4	Q7Z404	712 aa		18.56	■□□□□ 0.56
PTPA-222	ENST00000445241	SYNE4	Q8N205	404 aa		18.56	■□□□□ 0.56
PTPA-222	ENST00000445241	C7orf43	Q8WVR3	580 aa		18.56	■□□□□ 0.56
PTPA-222	ENST00000445241	LTBP3	Q9NS15	1303 aa		18.55	■□□□□ 0.56
PTPA-222	ENST00000445241	ARHGAP27	Q6ZUM4	889 aa		18.55	■□□□□ 0.56
PTPA-222	ENST00000445241	C3orf67	Q6ZVT6	689 aa		18.55	■□□□□ 0.56
PTPA-222	ENST00000445241	DDX46	Q7L014	1031 aa	Known RBP	18.55	■□□□□ 0.56
PTPA-222	ENST00000445241	PLA2G12B	Q9BX93	195 aa		18.55	■□□□□ 0.56
PTPA-222	ENST00000445241	SRCIN1	Q9C0H9	1055 aa		18.55	■□□□□ 0.56
PTPA-222	ENST00000445241	BBOX1	O75936	387 aa		18.54	■□□□□ 0.56
PTPA-222	ENST00000445241	RTKN2	Q8IZC4	609 aa		18.54	■□□□□ 0.56
PTPA-222	ENST00000445241	BCL2L13	Q9BXK5	485 aa		18.54	■□□□□ 0.56
PTPA-222	ENST00000445241	API5	Q9BZZ5	524 aa	Known RBP	18.54	■□□□□ 0.56
PTPA-222	ENST00000445241	DICER1	Q9UPY3	1922 aa	Known RBP	18.54	■□□□□ 0.56
PTPA-222	ENST00000445241	IPO8	O15397	1037 aa	Known RBP	18.53	■□□□□ 0.56
PTPA-222	ENST00000445241	C21orf2	O43822	256 aa		18.53	■□□□□ 0.56
PTPA-222	ENST00000445241	CASP7	P55210	303 aa		18.53	■□□□□ 0.56
PTPA-222	ENST00000445241	GRAP	Q13588	217 aa		18.53	■□□□□ 0.56
PTPA-222	ENST00000445241	CCDC152	Q4G0S7	254 aa		18.53	■□□□□ 0.56
PTPA-222	ENST00000445241	CCDC93	Q567U6	631 aa		18.53	■□□□□ 0.56
PTPA-222	ENST00000445241	GRAPL	Q8TC17	118 aa	Predicted RBP	18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms